EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000020942 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 14860 bases
Position: chrLG20:22388186-22403045
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000021937	zf-C2H2	PF00096.26	6.1e-57	1	6
ENSELUP00000021937	zf-C2H2	PF00096.26	6.1e-57	2	6
ENSELUP00000021937	zf-C2H2	PF00096.26	6.1e-57	3	6
ENSELUP00000021937	zf-C2H2	PF00096.26	6.1e-57	4	6
ENSELUP00000021937	zf-C2H2	PF00096.26	6.1e-57	5	6
ENSELUP00000021937	zf-C2H2	PF00096.26	6.1e-57	6	6
ENSELUP00000021919	zf-C2H2	PF00096.26	7.8e-28	1	3
ENSELUP00000021919	zf-C2H2	PF00096.26	7.8e-28	2	3
ENSELUP00000021919	zf-C2H2	PF00096.26	7.8e-28	3	3
ENSELUP00000021919	zf-met	PF12874.7	7.9e-11	1	2
ENSELUP00000021919	zf-met	PF12874.7	7.9e-11	2	2
ENSELUP00000021937	zf-met	PF12874.7	2.4e-06	1	2
ENSELUP00000021937	zf-met	PF12874.7	2.4e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000032716	-	1569	-	ENSELUP00000021919	522 (aa)	-	-
ENSELUT00000032751	-	10616	-	ENSELUP00000021937	1597 (aa)	-	UPI0005767F5E

Gene Model

Click here to download ENSELUG00000020942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000020942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000020942	-	99	30.476	ENSELUG00000013094	-	99	37.374

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000020942	-	99	30.037	ENSAMXG00000039744	-	99	31.579	Astyanax_mexicanus
ENSELUG00000020942	-	98	46.019	ENSMAMG00000023622	-	99	47.165	Mastacembelus_armatus
ENSELUG00000020942	-	99	42.096	ENSPKIG00000024552	-	95	42.386	Paramormyrops_kingsleyae
ENSELUG00000020942	-	99	44.081	ENSPNYG00000005794	-	99	48.525	Pundamilia_nyererei
ENSELUG00000020942	-	99	39.077	ENSPNAG00000024807	-	94	39.401	Pygocentrus_nattereri
ENSELUG00000020942	-	95	50.000	ENSSFOG00015017155	-	91	50.000	Scleropages_formosus