EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000020948 (Gene tree)
Gene ID: 105011497
Gene Symbol: -
Alias: zgc:92772
Full Name: ras-related protein Rab-11B-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 4131 bases
Position: chrLG08:10892312-10896442
Accession: 105011497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000040451	MMR_HSR1	PF01926.23	1.2e-07	1	1
ENSELUP00000021928	MMR_HSR1	PF01926.23	4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000032712	-	393	-	ENSELUP00000040451	130 (aa)	-	-
ENSELUT00000032724	-	657	XM_010871556	ENSELUP00000021928	218 (aa)	XP_010869858	-

Gene Model

Click here to download ENSELUG00000020948's gene model file

Pathways

Pathway ID	Pathway Name	Source
els04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000020948's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000020948	-	94	52.459	ENSELUG00000012801	rab13	87	46.243
ENSELUG00000020948	-	81	31.132	ENSELUG00000008604	rras2	58	32.203
ENSELUG00000020948	-	89	35.043	ENSELUG00000006480	rheb	86	33.125
ENSELUG00000020948	-	92	47.500	ENSELUG00000007123	rab12	69	42.424
ENSELUG00000020948	-	90	38.462	ENSELUG00000008876	rab6a	75	36.943
ENSELUG00000020948	-	92	51.240	ENSELUG00000013957	-	85	44.751
ENSELUG00000020948	-	90	49.573	ENSELUG00000010439	-	89	42.857
ENSELUG00000020948	-	93	55.372	ENSELUG00000009832	rab14	78	52.096
ENSELUG00000020948	-	96	47.200	ENSELUG00000022997	rab30	93	40.107
ENSELUG00000020948	-	95	55.285	ENSELUG00000014785	rab4a	79	53.846
ENSELUG00000020948	-	95	79.032	ENSELUG00000006604	rab25a	98	64.319
ENSELUG00000020948	-	74	33.537	ENSELUG00000017558	mras	82	35.227
ENSELUG00000020948	-	98	100.000	ENSELUG00000021148	rab11bb	100	95.853
ENSELUG00000020948	-	98	96.875	ENSELUG00000002999	rab11a	93	96.296
ENSELUG00000020948	-	93	52.066	ENSELUG00000023972	rab35	99	43.269
ENSELUG00000020948	-	92	41.129	ENSELUG00000016622	rab9a	83	40.476
ENSELUG00000020948	-	95	57.258	ENSELUG00000012166	RAB1A	95	46.190
ENSELUG00000020948	-	88	30.252	ENSELUG00000004400	arl4cb	60	30.252
ENSELUG00000020948	-	90	37.607	ENSELUG00000001257	rab6ba	92	31.500
ENSELUG00000020948	-	93	46.341	ENSELUG00000010345	rab42a	84	41.436
ENSELUG00000020948	-	81	34.906	ENSELUG00000004712	HRAS	85	36.420
ENSELUG00000020948	-	88	30.000	ENSELUG00000023460	-	63	30.000
ENSELUG00000020948	-	89	31.624	ENSELUG00000016028	rhebl1	88	30.675
ENSELUG00000020948	-	92	41.322	ENSELUG00000013219	rab33a	84	35.577
ENSELUG00000020948	-	90	44.915	ENSELUG00000018921	rab36	59	40.506
ENSELUG00000020948	-	98	96.875	ENSELUG00000019240	-	99	90.722
ENSELUG00000020948	-	95	51.613	ENSELUG00000016450	rab18b	83	46.199
ENSELUG00000020948	-	89	33.613	ENSELUG00000013666	si:cabz01085950.1	82	33.533
ENSELUG00000020948	-	92	41.935	ENSELUG00000021199	RAB9A	79	40.000
ENSELUG00000020948	-	89	39.316	ENSELUG00000022157	rab34a	59	35.256
ENSELUG00000020948	-	92	37.815	ENSELUG00000022470	rab6bb	75	36.306
ENSELUG00000020948	-	95	57.258	ENSELUG00000023815	-	83	53.012
ENSELUG00000020948	-	93	47.107	ENSELUG00000005989	RAB15	99	38.318
ENSELUG00000020948	-	98	53.906	ENSELUG00000013571	-	78	52.695
ENSELUG00000020948	-	96	55.200	ENSELUG00000011680	zgc:171927	99	42.991
ENSELUG00000020948	-	91	45.833	ENSELUG00000011352	-	61	42.405
ENSELUG00000020948	-	91	39.344	ENSELUG00000006539	RAB7A	78	39.877
ENSELUG00000020948	-	93	58.678	ENSELUG00000023964	rab2a	99	47.393
ENSELUG00000020948	-	88	30.252	ENSELUG00000015699	arl4ca	61	30.252
ENSELUG00000020948	-	90	49.573	ENSELUG00000013436	rab5ab	90	41.951
ENSELUG00000020948	-	91	40.164	ENSELUG00000000175	zgc:100918	79	39.877
ENSELUG00000020948	-	90	33.071	ENSELUG00000013206	rasl11a	73	31.765
ENSELUG00000020948	-	95	58.065	ENSELUG00000012428	-	83	53.614
ENSELUG00000020948	-	92	43.802	ENSELUG00000002575	rab33ba	75	38.043
ENSELUG00000020948	-	93	40.800	ENSELUG00000004378	rab9b	83	41.071
ENSELUG00000020948	-	89	52.137	ENSELUG00000003805	rab18a	79	45.679
ENSELUG00000020948	-	90	47.009	ENSELUG00000015343	rab22a	83	42.857
ENSELUG00000020948	-	82	38.318	ENSELUG00000020788	rab23	80	34.031
ENSELUG00000020948	-	98	93.750	ENSELUG00000012035	rab11al	99	82.326
ENSELUG00000020948	-	93	50.413	ENSELUG00000020012	rab15	98	39.234
ENSELUG00000020948	-	89	34.188	ENSELUG00000018367	rheb	89	32.317
ENSELUG00000020948	-	90	49.573	ENSELUG00000006462	rab5aa	89	43.350
ENSELUG00000020948	-	81	33.019	ENSELUG00000003058	KRAS	93	34.807
ENSELUG00000020948	-	95	57.258	ENSELUG00000015413	rab1ab	99	46.190
ENSELUG00000020948	-	85	48.214	ENSELUG00000023120	-	90	35.821
ENSELUG00000020948	-	88	30.172	ENSELUG00000000140	arl11	63	30.172
ENSELUG00000020948	-	92	51.240	ENSELUG00000005304	rab39ba	82	45.977
ENSELUG00000020948	-	98	49.606	ENSELUG00000023247	si:dkey-16l2.16	100	41.860
ENSELUG00000020948	-	91	39.344	ENSELUG00000016682	-	78	39.877
ENSELUG00000020948	-	74	34.146	ENSELUG00000005090	si:ch73-116o1.2	71	35.795
ENSELUG00000020948	-	99	99.078	ENSELUG00000000916	-	100	99.078
ENSELUG00000020948	-	90	50.427	ENSELUG00000018516	rab5c	74	48.447
ENSELUG00000020948	-	98	79.688	ENSELUG00000012060	rab25b	100	65.438

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000020948	-	98	100.000	ENSAPOG00000023455	rab11bb	100	96.330	Acanthochromis_polyacanthus
ENSELUG00000020948	-	98	100.000	ENSACIG00000019631	rab11bb	100	84.404	Amphilophus_citrinellus
ENSELUG00000020948	-	98	100.000	ENSACIG00000024376	-	100	98.624	Amphilophus_citrinellus
ENSELUG00000020948	-	98	100.000	ENSAOCG00000018239	rab11bb	100	96.330	Amphiprion_ocellaris
ENSELUG00000020948	-	98	100.000	ENSAOCG00000018849	-	100	98.624	Amphiprion_ocellaris
ENSELUG00000020948	-	98	100.000	ENSAPEG00000016590	rab11bb	100	96.330	Amphiprion_percula
ENSELUG00000020948	-	98	100.000	ENSATEG00000023725	-	100	98.165	Anabas_testudineus
ENSELUG00000020948	-	98	100.000	ENSATEG00000017696	rab11bb	100	96.330	Anabas_testudineus
ENSELUG00000020948	-	94	97.573	ENSAPLG00000011046	-	94	97.573	Anas_platyrhynchos
ENSELUG00000020948	-	98	100.000	ENSACLG00000005446	-	100	98.624	Astatotilapia_calliptera
ENSELUG00000020948	-	98	100.000	ENSACLG00000007076	rab11bb	100	96.330	Astatotilapia_calliptera
ENSELUG00000020948	-	98	98.438	ENSAMXG00000037623	-	100	95.413	Astyanax_mexicanus
ENSELUG00000020948	-	98	100.000	ENSAMXG00000042655	rab11bb	100	97.706	Astyanax_mexicanus
ENSELUG00000020948	-	98	97.656	ENSBTAG00000002475	RAB11B	100	95.872	Bos_taurus
ENSELUG00000020948	-	95	94.258	ENSCHIG00000022426	-	93	94.258	Capra_hircus
ENSELUG00000020948	-	98	97.656	ENSCATG00000029188	-	100	95.872	Cercocebus_atys
ENSELUG00000020948	-	98	98.438	ENSCPBG00000017056	-	100	96.789	Chrysemys_picta_bellii
ENSELUG00000020948	-	98	100.000	ENSCSEG00000012149	rab11bb	100	96.330	Cynoglossus_semilaevis
ENSELUG00000020948	-	98	100.000	ENSCSEG00000007239	-	100	98.165	Cynoglossus_semilaevis
ENSELUG00000020948	-	98	98.438	ENSCVAG00000019751	-	100	95.413	Cyprinodon_variegatus
ENSELUG00000020948	-	98	100.000	ENSCVAG00000017021	-	100	96.330	Cyprinodon_variegatus
ENSELUG00000020948	-	98	100.000	ENSCVAG00000019718	-	100	97.706	Cyprinodon_variegatus
ENSELUG00000020948	-	98	99.219	ENSDARG00000090086	rab11bb	100	96.789	Danio_rerio
ENSELUG00000020948	-	99	93.548	ENSETEG00000000905	-	99	93.548	Echinops_telfairi
ENSELUG00000020948	-	98	93.488	ENSEASG00005003708	-	99	93.488	Equus_asinus_asinus
ENSELUG00000020948	-	98	93.488	ENSECAG00000000716	RAB11B	99	93.488	Equus_caballus
ENSELUG00000020948	-	98	98.438	ENSFALG00000011828	-	100	96.789	Ficedula_albicollis
ENSELUG00000020948	-	98	100.000	ENSFHEG00000022676	-	100	98.165	Fundulus_heteroclitus
ENSELUG00000020948	-	98	100.000	ENSFHEG00000018353	rab11bb	100	96.330	Fundulus_heteroclitus
ENSELUG00000020948	-	98	100.000	ENSGMOG00000009211	rab11bb	100	96.330	Gadus_morhua
ENSELUG00000020948	-	98	98.438	ENSGMOG00000009668	-	99	94.907	Gadus_morhua
ENSELUG00000020948	-	98	98.438	ENSGALG00000000613	RAB11B	100	96.789	Gallus_gallus
ENSELUG00000020948	-	98	100.000	ENSGAFG00000007102	rab11bb	100	96.330	Gambusia_affinis
ENSELUG00000020948	-	98	96.875	ENSGACG00000013297	-	99	94.521	Gasterosteus_aculeatus
ENSELUG00000020948	-	98	99.219	ENSGACG00000015479	rab11bb	100	95.872	Gasterosteus_aculeatus
ENSELUG00000020948	-	98	97.656	ENSGGOG00000014516	RAB11B	100	95.872	Gorilla_gorilla
ENSELUG00000020948	-	98	100.000	ENSHBUG00000009947	-	100	98.624	Haplochromis_burtoni
ENSELUG00000020948	-	98	100.000	ENSHBUG00000014777	rab11bb	100	96.330	Haplochromis_burtoni
ENSELUG00000020948	-	98	98.438	ENSHCOG00000000954	-	100	95.872	Hippocampus_comes
ENSELUG00000020948	-	98	96.094	ENSHCOG00000000985	-	100	92.202	Hippocampus_comes
ENSELUG00000020948	-	98	100.000	ENSHCOG00000002423	rab11bb	100	96.789	Hippocampus_comes
ENSELUG00000020948	-	98	100.000	ENSIPUG00000019927	rab11bb	100	97.248	Ictalurus_punctatus
ENSELUG00000020948	-	98	98.438	ENSIPUG00000025100	rab11b	100	95.413	Ictalurus_punctatus
ENSELUG00000020948	-	98	100.000	ENSKMAG00000009033	rab11bb	100	96.330	Kryptolebias_marmoratus
ENSELUG00000020948	-	98	100.000	ENSKMAG00000006170	-	100	98.624	Kryptolebias_marmoratus
ENSELUG00000020948	-	98	100.000	ENSLBEG00000015248	rab11bb	100	96.330	Labrus_bergylta
ENSELUG00000020948	-	99	91.244	ENSLBEG00000005981	-	100	91.244	Labrus_bergylta
ENSELUG00000020948	-	99	98.618	ENSLBEG00000004172	-	100	98.618	Labrus_bergylta
ENSELUG00000020948	-	98	98.438	ENSLACG00000016857	-	100	96.789	Latimeria_chalumnae
ENSELUG00000020948	-	98	97.656	ENSMFAG00000003654	RAB11B	100	95.872	Macaca_fascicularis
ENSELUG00000020948	-	98	97.656	ENSMLEG00000030601	-	100	95.872	Mandrillus_leucophaeus
ENSELUG00000020948	-	98	100.000	ENSMAMG00000006378	rab11bb	100	95.872	Mastacembelus_armatus
ENSELUG00000020948	-	98	99.219	ENSMAMG00000018533	-	100	97.248	Mastacembelus_armatus
ENSELUG00000020948	-	98	100.000	ENSMZEG00005003352	rab11bb	100	96.330	Maylandia_zebra
ENSELUG00000020948	-	98	100.000	ENSMZEG00005010975	-	100	98.624	Maylandia_zebra
ENSELUG00000020948	-	98	97.656	ENSMICG00000034065	-	100	95.872	Microcebus_murinus
ENSELUG00000020948	-	98	98.438	ENSMMOG00000001238	-	99	95.392	Mola_mola
ENSELUG00000020948	-	94	96.098	ENSMMOG00000007917	rab11bb	100	96.098	Mola_mola
ENSELUG00000020948	-	98	100.000	ENSMMOG00000001250	-	100	98.624	Mola_mola
ENSELUG00000020948	-	98	98.438	ENSMODG00000003841	-	100	96.789	Monodelphis_domestica
ENSELUG00000020948	-	98	100.000	ENSMALG00000022187	rab11bb	100	96.330	Monopterus_albus
ENSELUG00000020948	-	88	99.130	ENSMLUG00000006677	-	100	87.923	Myotis_lucifugus
ENSELUG00000020948	-	98	100.000	ENSNBRG00000023885	-	100	98.624	Neolamprologus_brichardi
ENSELUG00000020948	-	98	100.000	ENSNBRG00000000372	rab11bb	100	96.330	Neolamprologus_brichardi
ENSELUG00000020948	-	98	98.438	ENSMEUG00000003686	-	100	96.789	Notamacropus_eugenii
ENSELUG00000020948	-	98	100.000	ENSONIG00000002544	-	100	98.624	Oreochromis_niloticus
ENSELUG00000020948	-	98	100.000	ENSONIG00000010435	rab11bb	100	96.330	Oreochromis_niloticus
ENSELUG00000020948	-	88	94.737	ENSOANG00000031567	-	82	94.737	Ornithorhynchus_anatinus
ENSELUG00000020948	-	98	100.000	ENSORLG00000013938	rab11bb	100	95.872	Oryzias_latipes
ENSELUG00000020948	-	98	99.219	ENSORLG00000015284	-	72	96.330	Oryzias_latipes
ENSELUG00000020948	-	98	100.000	ENSORLG00020019393	rab11bb	100	95.872	Oryzias_latipes_hni
ENSELUG00000020948	-	98	99.219	ENSORLG00020020844	RAB11B	99	96.774	Oryzias_latipes_hni
ENSELUG00000020948	-	98	100.000	ENSORLG00015020173	rab11bb	100	95.872	Oryzias_latipes_hsok
ENSELUG00000020948	-	98	99.219	ENSORLG00015016999	RAB11B	99	96.774	Oryzias_latipes_hsok
ENSELUG00000020948	-	98	100.000	ENSOMEG00000017806	-	100	96.330	Oryzias_melastigma
ENSELUG00000020948	-	98	99.219	ENSOMEG00000002562	-	100	97.706	Oryzias_melastigma
ENSELUG00000020948	-	98	97.656	ENSPPAG00000028589	-	100	95.872	Pan_paniscus
ENSELUG00000020948	-	52	100.000	ENSPTIG00000012555	-	79	100.000	Panthera_tigris_altaica
ENSELUG00000020948	-	98	97.656	ENSPTRG00000010422	RAB11B	100	95.872	Pan_troglodytes
ENSELUG00000020948	-	98	97.656	ENSPANG00000007765	-	100	95.872	Papio_anubis
ENSELUG00000020948	-	98	100.000	ENSPKIG00000011640	rab11bb	100	96.330	Paramormyrops_kingsleyae
ENSELUG00000020948	-	98	98.438	ENSPKIG00000011703	-	100	95.872	Paramormyrops_kingsleyae
ENSELUG00000020948	-	98	98.438	ENSPKIG00000001389	-	69	95.794	Paramormyrops_kingsleyae
ENSELUG00000020948	-	97	92.694	ENSPSIG00000010242	-	85	92.694	Pelodiscus_sinensis
ENSELUG00000020948	-	98	100.000	ENSPMGG00000009435	rab11bb	100	96.330	Periophthalmus_magnuspinnatus
ENSELUG00000020948	-	98	96.875	ENSPMGG00000014336	-	99	94.009	Periophthalmus_magnuspinnatus
ENSELUG00000020948	-	98	98.438	ENSPMGG00000014333	-	100	96.789	Periophthalmus_magnuspinnatus
ENSELUG00000020948	-	97	96.226	ENSPCIG00000020371	-	99	96.226	Phascolarctos_cinereus
ENSELUG00000020948	-	98	100.000	ENSPFOG00000024114	-	100	96.330	Poecilia_formosa
ENSELUG00000020948	-	98	100.000	ENSPFOG00000006224	-	100	98.624	Poecilia_formosa
ENSELUG00000020948	-	98	100.000	ENSPLAG00000014207	-	100	98.624	Poecilia_latipinna
ENSELUG00000020948	-	98	100.000	ENSPLAG00000001598	rab11bb	100	96.330	Poecilia_latipinna
ENSELUG00000020948	-	98	100.000	ENSPMEG00000007842	-	100	98.624	Poecilia_mexicana
ENSELUG00000020948	-	98	100.000	ENSPMEG00000012389	rab11bb	100	96.330	Poecilia_mexicana
ENSELUG00000020948	-	98	100.000	ENSPREG00000014269	rab11bb	100	96.330	Poecilia_reticulata
ENSELUG00000020948	-	98	100.000	ENSPREG00000006336	-	100	98.165	Poecilia_reticulata
ENSELUG00000020948	-	98	100.000	ENSPNYG00000019611	-	100	98.624	Pundamilia_nyererei
ENSELUG00000020948	-	98	100.000	ENSPNYG00000004098	rab11bb	100	96.330	Pundamilia_nyererei
ENSELUG00000020948	-	98	97.656	ENSRROG00000037812	-	100	95.872	Rhinopithecus_roxellana
ENSELUG00000020948	-	97	95.755	ENSSHAG00000006816	-	97	95.755	Sarcophilus_harrisii
ENSELUG00000020948	-	98	98.438	ENSSFOG00015009042	rab11bb	100	95.872	Scleropages_formosus
ENSELUG00000020948	-	99	72.477	ENSSFOG00015006245	-	100	72.477	Scleropages_formosus
ENSELUG00000020948	-	98	100.000	ENSSMAG00000004922	rab11bb	100	95.872	Scophthalmus_maximus
ENSELUG00000020948	-	98	100.000	ENSSMAG00000018613	-	100	95.872	Scophthalmus_maximus
ENSELUG00000020948	-	98	100.000	ENSSDUG00000013558	rab11bb	100	96.330	Seriola_dumerili
ENSELUG00000020948	-	98	100.000	ENSSDUG00000002934	-	100	98.624	Seriola_dumerili
ENSELUG00000020948	-	98	100.000	ENSSLDG00000005275	-	100	98.624	Seriola_lalandi_dorsalis
ENSELUG00000020948	-	98	100.000	ENSSLDG00000020676	rab11bb	100	96.330	Seriola_lalandi_dorsalis
ENSELUG00000020948	-	98	98.438	ENSSPUG00000002243	-	100	96.789	Sphenodon_punctatus
ENSELUG00000020948	-	98	100.000	ENSSPAG00000014559	-	100	98.624	Stegastes_partitus
ENSELUG00000020948	-	98	100.000	ENSSPAG00000011419	rab11bb	100	96.330	Stegastes_partitus
ENSELUG00000020948	-	98	98.438	ENSTGUG00000000084	-	100	96.789	Taeniopygia_guttata
ENSELUG00000020948	-	98	98.438	ENSTRUG00000021614	-	99	95.392	Takifugu_rubripes
ENSELUG00000020948	-	98	100.000	ENSTRUG00000021619	-	100	98.148	Takifugu_rubripes
ENSELUG00000020948	-	98	100.000	ENSTRUG00000022029	rab11bb	100	96.330	Takifugu_rubripes
ENSELUG00000020948	-	98	100.000	ENSTNIG00000011081	rab11bb	100	95.413	Tetraodon_nigroviridis
ENSELUG00000020948	-	93	96.552	ENSTNIG00000002003	-	100	96.552	Tetraodon_nigroviridis
ENSELUG00000020948	-	98	100.000	ENSTNIG00000013182	-	100	98.148	Tetraodon_nigroviridis
ENSELUG00000020948	-	98	98.438	ENSTNIG00000013184	-	99	95.853	Tetraodon_nigroviridis
ENSELUG00000020948	-	98	97.656	ENSUAMG00000006639	-	99	96.585	Ursus_americanus
ENSELUG00000020948	-	98	97.674	ENSXETG00000025484	rab11b.1	99	95.455	Xenopus_tropicalis
ENSELUG00000020948	-	98	100.000	ENSXCOG00000009190	-	100	98.624	Xiphophorus_couchianus
ENSELUG00000020948	-	98	100.000	ENSXCOG00000008042	-	100	96.330	Xiphophorus_couchianus
ENSELUG00000020948	-	98	100.000	ENSXMAG00000024840	-	100	98.165	Xiphophorus_maculatus
ENSELUG00000020948	-	98	100.000	ENSXMAG00000011926	rab11bb	100	96.330	Xiphophorus_maculatus