EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000020984 (Gene tree)
Gene ID: 105023189
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 12700 bases
Position: chrLG01:21045060-21057759
Accession: 105023189
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000040510	AARP2CN	PF08142.12	4.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000042077	-	4103	XM_010892185	ENSELUP00000040510	867 (aa)	XP_010890487	UPI00057775B1

Gene Model

Click here to download ENSELUG00000020984's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000020984's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000020984	tsr1	94	55.556	ENSG00000167721	TSR1	98	55.433	Homo_sapiens
ENSELUG00000020984	tsr1	96	76.914	ENSAPOG00000020891	tsr1	100	76.914	Acanthochromis_polyacanthus
ENSELUG00000020984	tsr1	96	54.112	ENSAMEG00000007599	TSR1	99	53.618	Ailuropoda_melanoleuca
ENSELUG00000020984	tsr1	96	74.251	ENSACIG00000007090	tsr1	100	74.132	Amphilophus_citrinellus
ENSELUG00000020984	tsr1	96	76.886	ENSAOCG00000023284	tsr1	100	76.555	Amphiprion_ocellaris
ENSELUG00000020984	tsr1	89	76.478	ENSAPEG00000008452	tsr1	100	76.123	Amphiprion_percula
ENSELUG00000020984	tsr1	96	76.429	ENSATEG00000021961	tsr1	100	76.758	Anabas_testudineus
ENSELUG00000020984	tsr1	87	58.707	ENSAPLG00000013422	TSR1	99	57.667	Anas_platyrhynchos
ENSELUG00000020984	tsr1	68	48.173	ENSACAG00000000859	TSR1	92	48.756	Anolis_carolinensis
ENSELUG00000020984	tsr1	94	54.945	ENSANAG00000031071	TSR1	98	54.945	Aotus_nancymaae
ENSELUG00000020984	tsr1	96	75.388	ENSACLG00000007595	tsr1	100	75.388	Astatotilapia_calliptera
ENSELUG00000020984	tsr1	95	56.174	ENSBTAG00000004225	TSR1	99	55.569	Bos_taurus
ENSELUG00000020984	tsr1	92	39.312	WBGene00006497	tag-151	96	39.487	Caenorhabditis_elegans
ENSELUG00000020984	tsr1	94	53.818	ENSCJAG00000012456	TSR1	99	53.818	Callithrix_jacchus
ENSELUG00000020984	tsr1	86	52.400	ENSCAFG00000019273	-	100	55.685	Canis_familiaris
ENSELUG00000020984	tsr1	95	54.469	ENSCAFG00000002106	-	99	54.371	Canis_familiaris
ENSELUG00000020984	tsr1	95	54.348	ENSCAFG00020009728	TSR1	99	54.251	Canis_lupus_dingo
ENSELUG00000020984	tsr1	95	55.985	ENSCHIG00000023935	TSR1	99	56.348	Capra_hircus
ENSELUG00000020984	tsr1	95	55.381	ENSTSYG00000005468	TSR1	98	55.772	Carlito_syrichta
ENSELUG00000020984	tsr1	88	54.026	ENSCPOG00000014833	TSR1	99	53.935	Cavia_porcellus
ENSELUG00000020984	tsr1	88	52.979	ENSCCAG00000028962	TSR1	98	52.979	Cebus_capucinus
ENSELUG00000020984	tsr1	94	54.921	ENSCATG00000044262	TSR1	99	54.435	Cercocebus_atys
ENSELUG00000020984	tsr1	95	55.918	ENSCLAG00000005567	TSR1	99	54.982	Chinchilla_lanigera
ENSELUG00000020984	tsr1	94	55.043	ENSCSAG00000013788	TSR1	99	54.557	Chlorocebus_sabaeus
ENSELUG00000020984	tsr1	93	57.335	ENSCPBG00000020363	TSR1	97	56.886	Chrysemys_picta_bellii
ENSELUG00000020984	tsr1	93	43.574	ENSCING00000020658	-	99	43.452	Ciona_intestinalis
ENSELUG00000020984	tsr1	93	43.015	ENSCSAVG00000001875	-	100	42.105	Ciona_savignyi
ENSELUG00000020984	tsr1	94	58.312	ENSCANG00000033056	TSR1	95	69.767	Colobus_angolensis_palliatus
ENSELUG00000020984	tsr1	95	54.031	ENSCGRG00001023942	Tsr1	99	54.087	Cricetulus_griseus_chok1gshd
ENSELUG00000020984	tsr1	96	73.533	ENSCSEG00000013009	tsr1	100	73.653	Cynoglossus_semilaevis
ENSELUG00000020984	tsr1	96	74.611	ENSCVAG00000000506	tsr1	100	74.639	Cyprinodon_variegatus
ENSELUG00000020984	tsr1	96	73.571	ENSDARG00000007744	tsr1	99	73.229	Danio_rerio
ENSELUG00000020984	tsr1	95	55.663	ENSDNOG00000004715	TSR1	99	57.103	Dasypus_novemcinctus
ENSELUG00000020984	tsr1	92	49.000	ENSDORG00000023234	-	99	47.826	Dipodomys_ordii
ENSELUG00000020984	tsr1	95	55.018	ENSDORG00000016371	-	99	54.096	Dipodomys_ordii
ENSELUG00000020984	tsr1	92	42.998	FBgn0037073	Tsr1	96	41.943	Drosophila_melanogaster
ENSELUG00000020984	tsr1	83	67.541	ENSETEG00000017534	TSR1	89	67.541	Echinops_telfairi
ENSELUG00000020984	tsr1	91	51.128	ENSEBUG00000013731	TSR1	98	51.128	Eptatretus_burgeri
ENSELUG00000020984	tsr1	95	55.139	ENSEASG00005009302	TSR1	97	55.018	Equus_asinus_asinus
ENSELUG00000020984	tsr1	95	55.018	ENSECAG00000009114	TSR1	99	54.897	Equus_caballus
ENSELUG00000020984	tsr1	95	54.600	ENSFCAG00000006313	TSR1	99	54.479	Felis_catus
ENSELUG00000020984	tsr1	95	56.988	ENSFALG00000006532	TSR1	99	57.711	Ficedula_albicollis
ENSELUG00000020984	tsr1	95	55.018	ENSFDAG00000006038	TSR1	99	54.567	Fukomys_damarensis
ENSELUG00000020984	tsr1	96	73.278	ENSFHEG00000003626	tsr1	100	72.986	Fundulus_heteroclitus
ENSELUG00000020984	tsr1	96	70.251	ENSGMOG00000010336	tsr1	100	70.248	Gadus_morhua
ENSELUG00000020984	tsr1	96	74.881	ENSGAFG00000012993	tsr1	100	75.149	Gambusia_affinis
ENSELUG00000020984	tsr1	96	72.771	ENSGACG00000010843	tsr1	100	73.008	Gasterosteus_aculeatus
ENSELUG00000020984	tsr1	93	57.090	ENSGAGG00000025619	-	99	57.333	Gopherus_agassizii
ENSELUG00000020984	tsr1	94	55.678	ENSGGOG00000001704	TSR1	98	55.556	Gorilla_gorilla
ENSELUG00000020984	tsr1	96	75.747	ENSHBUG00000017904	tsr1	100	75.747	Haplochromis_burtoni
ENSELUG00000020984	tsr1	92	48.753	ENSHGLG00000015688	-	98	47.257	Heterocephalus_glaber_female
ENSELUG00000020984	tsr1	95	55.127	ENSHGLG00000012806	-	99	54.556	Heterocephalus_glaber_female
ENSELUG00000020984	tsr1	95	55.127	ENSHGLG00100015392	TSR1	99	54.556	Heterocephalus_glaber_male
ENSELUG00000020984	tsr1	96	73.918	ENSHCOG00000001432	tsr1	100	74.038	Hippocampus_comes
ENSELUG00000020984	tsr1	96	73.127	ENSIPUG00000004618	tsr1	100	73.365	Ictalurus_punctatus
ENSELUG00000020984	tsr1	95	56.280	ENSSTOG00000011819	TSR1	99	55.556	Ictidomys_tridecemlineatus
ENSELUG00000020984	tsr1	87	54.161	ENSJJAG00000019505	Tsr1	95	53.088	Jaculus_jaculus
ENSELUG00000020984	tsr1	96	74.582	ENSKMAG00000005763	tsr1	100	74.582	Kryptolebias_marmoratus
ENSELUG00000020984	tsr1	96	75.357	ENSLBEG00000021823	tsr1	100	75.357	Labrus_bergylta
ENSELUG00000020984	tsr1	95	57.314	ENSLACG00000002197	TSR1	99	57.212	Latimeria_chalumnae
ENSELUG00000020984	tsr1	87	75.000	ENSLOCG00000006491	TSR1	99	75.000	Lepisosteus_oculatus
ENSELUG00000020984	tsr1	94	55.286	ENSMFAG00000021330	TSR1	99	54.800	Macaca_fascicularis
ENSELUG00000020984	tsr1	94	55.164	ENSMMUG00000017519	TSR1	99	54.678	Macaca_mulatta
ENSELUG00000020984	tsr1	94	55.164	ENSMNEG00000031382	TSR1	99	54.678	Macaca_nemestrina
ENSELUG00000020984	tsr1	94	54.800	ENSMLEG00000036733	TSR1	99	54.313	Mandrillus_leucophaeus
ENSELUG00000020984	tsr1	96	76.631	ENSMAMG00000017918	tsr1	100	76.394	Mastacembelus_armatus
ENSELUG00000020984	tsr1	96	75.808	ENSMZEG00005007477	tsr1	100	75.808	Maylandia_zebra
ENSELUG00000020984	tsr1	95	57.108	ENSMGAG00000005576	TSR1	99	56.611	Meleagris_gallopavo
ENSELUG00000020984	tsr1	95	55.636	ENSMICG00000012943	TSR1	99	55.515	Microcebus_murinus
ENSELUG00000020984	tsr1	95	53.430	ENSMOCG00000022764	Tsr1	99	53.245	Microtus_ochrogaster
ENSELUG00000020984	tsr1	96	74.970	ENSMMOG00000014280	tsr1	100	75.449	Mola_mola
ENSELUG00000020984	tsr1	94	56.364	ENSMODG00000010658	TSR1	99	55.394	Monodelphis_domestica
ENSELUG00000020984	tsr1	96	76.196	ENSMALG00000011681	tsr1	100	76.611	Monopterus_albus
ENSELUG00000020984	tsr1	95	53.735	MGP_CAROLIEiJ_G0016727	Tsr1	99	53.524	Mus_caroli
ENSELUG00000020984	tsr1	95	54.293	ENSMUSG00000038335	Tsr1	99	54.077	Mus_musculus
ENSELUG00000020984	tsr1	95	54.414	MGP_PahariEiJ_G0017864	Tsr1	99	54.197	Mus_pahari
ENSELUG00000020984	tsr1	95	54.293	MGP_SPRETEiJ_G0017570	Tsr1	99	54.077	Mus_spretus
ENSELUG00000020984	tsr1	78	56.490	ENSMPUG00000013000	TSR1	100	56.932	Mustela_putorius_furo
ENSELUG00000020984	tsr1	94	56.204	ENSMLUG00000003505	TSR1	99	56.121	Myotis_lucifugus
ENSELUG00000020984	tsr1	96	75.627	ENSNBRG00000020728	tsr1	100	75.627	Neolamprologus_brichardi
ENSELUG00000020984	tsr1	94	52.020	ENSNLEG00000017184	TSR1	98	51.652	Nomascus_leucogenys
ENSELUG00000020984	tsr1	96	75.566	ENSONIG00000013131	tsr1	100	74.882	Oreochromis_niloticus
ENSELUG00000020984	tsr1	90	53.846	ENSOANG00000008637	TSR1	98	53.342	Ornithorhynchus_anatinus
ENSELUG00000020984	tsr1	94	56.127	ENSOCUG00000014256	TSR1	98	55.760	Oryctolagus_cuniculus
ENSELUG00000020984	tsr1	96	73.986	ENSORLG00000004926	tsr1	100	73.986	Oryzias_latipes
ENSELUG00000020984	tsr1	96	73.866	ENSORLG00020008792	tsr1	100	73.866	Oryzias_latipes_hni
ENSELUG00000020984	tsr1	96	73.986	ENSORLG00015013838	tsr1	100	73.986	Oryzias_latipes_hsok
ENSELUG00000020984	tsr1	96	73.389	ENSOMEG00000004830	tsr1	100	73.389	Oryzias_melastigma
ENSELUG00000020984	tsr1	94	55.144	ENSOGAG00000004492	TSR1	99	54.982	Otolemur_garnettii
ENSELUG00000020984	tsr1	95	55.985	ENSOARG00000015437	TSR1	97	56.348	Ovis_aries
ENSELUG00000020984	tsr1	94	55.556	ENSPPAG00000036355	TSR1	98	55.433	Pan_paniscus
ENSELUG00000020984	tsr1	95	54.358	ENSPPRG00000015519	-	99	54.358	Panthera_pardus
ENSELUG00000020984	tsr1	95	54.358	ENSPTIG00000010608	TSR1	99	54.358	Panthera_tigris_altaica
ENSELUG00000020984	tsr1	94	55.556	ENSPTRG00000008547	TSR1	98	55.433	Pan_troglodytes
ENSELUG00000020984	tsr1	94	52.612	ENSPANG00000024463	TSR1	99	52.612	Papio_anubis
ENSELUG00000020984	tsr1	96	71.068	ENSPKIG00000013972	tsr1	99	70.878	Paramormyrops_kingsleyae
ENSELUG00000020984	tsr1	84	54.993	ENSPSIG00000018258	TSR1	100	54.856	Pelodiscus_sinensis
ENSELUG00000020984	tsr1	96	73.735	ENSPMGG00000011577	tsr1	99	73.887	Periophthalmus_magnuspinnatus
ENSELUG00000020984	tsr1	95	53.744	ENSPEMG00000018033	Tsr1	99	53.623	Peromyscus_maniculatus_bairdii
ENSELUG00000020984	tsr1	94	56.204	ENSPCIG00000009357	TSR1	96	56.448	Phascolarctos_cinereus
ENSELUG00000020984	tsr1	96	73.810	ENSPFOG00000004483	TSR1	100	73.810	Poecilia_formosa
ENSELUG00000020984	tsr1	96	73.990	ENSPLAG00000022320	tsr1	100	74.614	Poecilia_latipinna
ENSELUG00000020984	tsr1	96	74.232	ENSPMEG00000004577	tsr1	100	74.733	Poecilia_mexicana
ENSELUG00000020984	tsr1	94	74.574	ENSPREG00000010354	tsr1	96	74.969	Poecilia_reticulata
ENSELUG00000020984	tsr1	94	50.120	ENSPPYG00000007792	TSR1	98	49.639	Pongo_abelii
ENSELUG00000020984	tsr1	95	55.030	ENSPCOG00000017928	TSR1	99	54.940	Propithecus_coquereli
ENSELUG00000020984	tsr1	95	55.018	ENSPVAG00000002162	TSR1	99	54.776	Pteropus_vampyrus
ENSELUG00000020984	tsr1	96	75.508	ENSPNYG00000016163	tsr1	100	75.508	Pundamilia_nyererei
ENSELUG00000020984	tsr1	96	73.722	ENSPNAG00000008659	tsr1	100	73.571	Pygocentrus_nattereri
ENSELUG00000020984	tsr1	95	54.051	ENSRNOG00000002980	Tsr1	99	53.892	Rattus_norvegicus
ENSELUG00000020984	tsr1	94	55.650	ENSRBIG00000040016	TSR1	99	55.286	Rhinopithecus_bieti
ENSELUG00000020984	tsr1	94	55.529	ENSRROG00000030361	TSR1	99	55.164	Rhinopithecus_roxellana
ENSELUG00000020984	tsr1	94	54.909	ENSSBOG00000020785	TSR1	98	54.005	Saimiri_boliviensis_boliviensis
ENSELUG00000020984	tsr1	94	56.832	ENSSHAG00000011394	TSR1	99	56.348	Sarcophilus_harrisii
ENSELUG00000020984	tsr1	96	72.837	ENSSFOG00015005455	tsr1	100	72.837	Scleropages_formosus
ENSELUG00000020984	tsr1	96	76.134	ENSSMAG00000009504	tsr1	100	76.253	Scophthalmus_maximus
ENSELUG00000020984	tsr1	96	76.786	ENSSDUG00000012074	tsr1	100	76.868	Seriola_dumerili
ENSELUG00000020984	tsr1	96	76.996	ENSSLDG00000002031	tsr1	100	76.996	Seriola_lalandi_dorsalis
ENSELUG00000020984	tsr1	89	55.378	ENSSARG00000000759	TSR1	93	55.378	Sorex_araneus
ENSELUG00000020984	tsr1	95	57.194	ENSSPUG00000007042	TSR1	99	57.470	Sphenodon_punctatus
ENSELUG00000020984	tsr1	96	76.105	ENSSPAG00000021951	tsr1	100	76.225	Stegastes_partitus
ENSELUG00000020984	tsr1	95	54.994	ENSSSCG00000038534	TSR1	99	55.276	Sus_scrofa
ENSELUG00000020984	tsr1	86	60.292	ENSTGUG00000005883	TSR1	100	58.630	Taeniopygia_guttata
ENSELUG00000020984	tsr1	96	74.251	ENSTRUG00000004665	tsr1	100	75.120	Takifugu_rubripes
ENSELUG00000020984	tsr1	95	74.155	ENSTNIG00000016196	tsr1	100	74.306	Tetraodon_nigroviridis
ENSELUG00000020984	tsr1	64	73.846	ENSTBEG00000015275	-	66	73.846	Tupaia_belangeri
ENSELUG00000020984	tsr1	95	55.985	ENSTTRG00000001177	TSR1	99	55.985	Tursiops_truncatus
ENSELUG00000020984	tsr1	96	54.916	ENSUAMG00000025160	TSR1	99	53.874	Ursus_americanus
ENSELUG00000020984	tsr1	91	55.151	ENSUMAG00000009294	TSR1	98	54.146	Ursus_maritimus
ENSELUG00000020984	tsr1	80	49.856	ENSVPAG00000000228	TSR1	99	48.939	Vicugna_pacos
ENSELUG00000020984	tsr1	94	54.712	ENSVVUG00000021767	TSR1	98	54.612	Vulpes_vulpes
ENSELUG00000020984	tsr1	96	52.262	ENSXETG00000023797	tsr1	100	52.257	Xenopus_tropicalis
ENSELUG00000020984	tsr1	96	74.371	ENSXCOG00000009635	tsr1	100	73.923	Xiphophorus_couchianus
ENSELUG00000020984	tsr1	99	73.095	ENSXMAG00000001397	tsr1	99	73.126	Xiphophorus_maculatus