EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000021071 (Gene tree)
Gene ID
105022935
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Plus strand
Length
53295 bases
Position
chrLG01:20576779-20630073
Accession
105022935
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000022084tRNA_anti-codonPF01336.252.9e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000032933-4446XM_010891754ENSELUP00000022084607 (aa)XP_010890056UPI000661930B
Gene Model
Click here to download ENSELUG00000021071's gene model file
Pathways
Pathway IDPathway NameSource
els03030DNA replicationKEGG
els03420Nucleotide excision repairKEGG
els03430Mismatch repairKEGG
els03440Homologous recombinationKEGG
els03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000021071's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000021071rpa18863.178ENSELUG00000006136RPA19963.178
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000021071rpa19963.434ENSAPOG00000019409RPA18863.434Acanthochromis_polyacanthus
ENSELUG00000021071rpa19980.033ENSAPOG00000011658rpa19980.033Acanthochromis_polyacanthus
ENSELUG00000021071rpa19662.584ENSAMEG00000007706RPA19662.416Ailuropoda_melanoleuca
ENSELUG00000021071rpa19571.552ENSACIG00000007277rpa19971.552Amphilophus_citrinellus
ENSELUG00000021071rpa19564.055ENSACIG00000012881RPA19964.055Amphilophus_citrinellus
ENSELUG00000021071rpa19959.231ENSAOCG00000009003RPA110059.385Amphiprion_ocellaris
ENSELUG00000021071rpa19980.826ENSAOCG00000023376rpa19980.826Amphiprion_ocellaris
ENSELUG00000021071rpa19981.157ENSAPEG00000008634rpa19981.157Amphiprion_percula
ENSELUG00000021071rpa19956.992ENSAPEG00000019132RPA110056.992Amphiprion_percula
ENSELUG00000021071rpa19959.174ENSATEG00000006443RPA110059.480Anabas_testudineus
ENSELUG00000021071rpa19480.454ENSATEG00000022024rpa19980.454Anabas_testudineus
ENSELUG00000021071rpa19853.835ENSAPLG00000012442RPA19064.904Anas_platyrhynchos
ENSELUG00000021071rpa19957.810ENSACAG00000014490RPA19957.810Anolis_carolinensis
ENSELUG00000021071rpa19663.255ENSANAG00000023456RPA19863.087Aotus_nancymaae
ENSELUG00000021071rpa19962.969ENSACLG00000005223RPA19962.969Astatotilapia_calliptera
ENSELUG00000021071rpa19380.389ENSACLG00000006640rpa19980.389Astatotilapia_calliptera
ENSELUG00000021071rpa19977.924ENSAMXG00000008418rpa19978.254Astyanax_mexicanus
ENSELUG00000021071rpa19961.489ENSBTAG00000009711RPA19961.327Bos_taurus
ENSELUG00000021071rpa17932.091WBGene00017546rpa-17231.677Caenorhabditis_elegans
ENSELUG00000021071rpa19960.582ENSCJAG00000001848RPA19960.552Callithrix_jacchus
ENSELUG00000021071rpa19960.454ENSCAFG00000019249RPA19960.940Canis_familiaris
ENSELUG00000021071rpa19960.454ENSCAFG00020009847RPA19960.940Canis_lupus_dingo
ENSELUG00000021071rpa19961.489ENSCHIG00000026308RPA19961.650Capra_hircus
ENSELUG00000021071rpa19960.518ENSTSYG00000003482-9960.420Carlito_syrichta
ENSELUG00000021071rpa19960.940ENSCPOG00000000035RPA19960.778Cavia_porcellus
ENSELUG00000021071rpa19951.053ENSCCAG00000010981RPA19951.299Cebus_capucinus
ENSELUG00000021071rpa19961.650ENSCLAG00000005185-10061.389Chinchilla_lanigera
ENSELUG00000021071rpa19958.158ENSCLAG00000015045-9957.674Chinchilla_lanigera
ENSELUG00000021071rpa19952.181ENSCSAG00000013833RPA19952.427Chlorocebus_sabaeus
ENSELUG00000021071rpa19560.611ENSCHOG00000013540-9960.544Choloepus_hoffmanni
ENSELUG00000021071rpa17268.192ENSCHOG00000009454-9968.119Choloepus_hoffmanni
ENSELUG00000021071rpa19962.500ENSCPBG00000020377RPA19963.398Chrysemys_picta_bellii
ENSELUG00000021071rpa19942.810ENSCING00000023482-9942.810Ciona_intestinalis
ENSELUG00000021071rpa19663.311ENSCANG00000030911RPA19863.140Colobus_angolensis_palliatus
ENSELUG00000021071rpa19961.426ENSCGRG00001008197Rpa19961.812Cricetulus_griseus_chok1gshd
ENSELUG00000021071rpa18162.253ENSCGRG00000000582Rpa19962.722Cricetulus_griseus_crigri
ENSELUG00000021071rpa19956.329ENSCSEG00000012726RPA19957.167Cynoglossus_semilaevis
ENSELUG00000021071rpa19975.941ENSCSEG00000013066rpa19975.941Cynoglossus_semilaevis
ENSELUG00000021071rpa19657.187ENSCVAG00000013446-9657.032Cyprinodon_variegatus
ENSELUG00000021071rpa19978.289ENSCVAG00000019431rpa19978.938Cyprinodon_variegatus
ENSELUG00000021071rpa19976.860ENSDARG00000003938rpa19976.860Danio_rerio
ENSELUG00000021071rpa19862.623ENSDNOG00000017218RPA19962.459Dasypus_novemcinctus
ENSELUG00000021071rpa19962.175ENSDORG00000006199Rpa19962.175Dipodomys_ordii
ENSELUG00000021071rpa19943.163FBgn0010173RpA-709843.648Drosophila_melanogaster
ENSELUG00000021071rpa18371.000ENSETEG00000017608RPA18371.000Echinops_telfairi
ENSELUG00000021071rpa19861.794ENSEASG00005009372RPA19962.632Equus_asinus_asinus
ENSELUG00000021071rpa19961.588ENSECAG00000023886RPA19961.588Equus_caballus
ENSELUG00000021071rpa16968.019ENSEEUG00000002186-6867.780Erinaceus_europaeus
ENSELUG00000021071rpa19960.552ENSFCAG00000006306RPA19960.390Felis_catus
ENSELUG00000021071rpa19961.812ENSFALG00000006575RPA19961.812Ficedula_albicollis
ENSELUG00000021071rpa19960.714ENSFDAG00000007720RPA19960.356Fukomys_damarensis
ENSELUG00000021071rpa19978.607ENSFHEG00000003580rpa19978.607Fundulus_heteroclitus
ENSELUG00000021071rpa19976.783ENSGMOG00000010382rpa19976.783Gadus_morhua
ENSELUG00000021071rpa19961.364ENSGALG00000003072RPA19961.201Gallus_gallus
ENSELUG00000021071rpa19977.815ENSGAFG00000012916rpa19977.815Gambusia_affinis
ENSELUG00000021071rpa19959.604ENSGAFG00000020953RPA19959.756Gambusia_affinis
ENSELUG00000021071rpa19978.939ENSGACG00000010856rpa19978.939Gasterosteus_aculeatus
ENSELUG00000021071rpa19962.175ENSGAGG00000013611RPA19962.175Gopherus_agassizii
ENSELUG00000021071rpa19961.944ENSGGOG00000014186RPA19961.779Gorilla_gorilla
ENSELUG00000021071rpa19980.858ENSHBUG00000017773rpa19980.858Haplochromis_burtoni
ENSELUG00000021071rpa19557.831ENSHBUG00000009348RPA19857.831Haplochromis_burtoni
ENSELUG00000021071rpa19960.261ENSHGLG00000008846RPA110059.903Heterocephalus_glaber_female
ENSELUG00000021071rpa19956.260ENSHGLG00100000799-9955.916Heterocephalus_glaber_male
ENSELUG00000021071rpa19951.050ENSHGLG00100002005-9951.133Heterocephalus_glaber_male
ENSELUG00000021071rpa19960.261ENSHGLG00100017755-10059.903Heterocephalus_glaber_male
ENSELUG00000021071rpa19945.320ENSHCOG00000000351RPA19944.992Hippocampus_comes
ENSELUG00000021071rpa19971.289ENSHCOG00000001401rpa19971.289Hippocampus_comes
ENSELUG00000021071rpa19976.471ENSIPUG00000004400rpa19976.471Ictalurus_punctatus
ENSELUG00000021071rpa19061.837ENSSTOG00000022475RPA19461.661Ictidomys_tridecemlineatus
ENSELUG00000021071rpa19563.559ENSJJAG00000000876Rpa19863.158Jaculus_jaculus
ENSELUG00000021071rpa19960.784ENSKMAG00000000234RPA19960.784Kryptolebias_marmoratus
ENSELUG00000021071rpa19976.307ENSKMAG00000005605rpa19976.307Kryptolebias_marmoratus
ENSELUG00000021071rpa19977.668ENSLBEG00000021604rpa19977.668Labrus_bergylta
ENSELUG00000021071rpa19968.834ENSLBEG00000002281RPA18968.834Labrus_bergylta
ENSELUG00000021071rpa17861.443ENSLACG00000007210RPA19761.237Latimeria_chalumnae
ENSELUG00000021071rpa19971.148ENSLOCG00000006397rpa19971.148Lepisosteus_oculatus
ENSELUG00000021071rpa19960.256ENSLAFG00000015354RPA19960.096Loxodonta_africana
ENSELUG00000021071rpa18060.321ENSMFAG00000036138-9860.643Macaca_fascicularis
ENSELUG00000021071rpa19956.557ENSMMUG00000002442-9956.393Macaca_mulatta
ENSELUG00000021071rpa19662.479ENSMMUG00000011604-9862.752Macaca_mulatta
ENSELUG00000021071rpa18962.260ENSMNEG00000029837-9962.047Macaca_nemestrina
ENSELUG00000021071rpa19561.889ENSMNEG00000031632-9862.162Macaca_nemestrina
ENSELUG00000021071rpa19659.060ENSMLEG00000038768-9859.599Mandrillus_leucophaeus
ENSELUG00000021071rpa19957.887ENSMAMG00000020097RPA19957.887Mastacembelus_armatus
ENSELUG00000021071rpa19980.693ENSMAMG00000017993rpa19980.693Mastacembelus_armatus
ENSELUG00000021071rpa19962.969ENSMZEG00005024731RPA19962.969Maylandia_zebra
ENSELUG00000021071rpa19980.858ENSMZEG00005007551rpa19980.858Maylandia_zebra
ENSELUG00000021071rpa19861.678ENSMGAG00000005315RPA19861.513Meleagris_gallopavo
ENSELUG00000021071rpa19663.345ENSMAUG00000010474Rpa19863.559Mesocricetus_auratus
ENSELUG00000021071rpa19961.726ENSMICG00000012867RPA19961.990Microcebus_murinus
ENSELUG00000021071rpa19961.726ENSMOCG00000013019Rpa19961.564Microtus_ochrogaster
ENSELUG00000021071rpa19978.878ENSMMOG00000014292rpa19980.789Mola_mola
ENSELUG00000021071rpa19862.857ENSMMOG00000010868RPA19862.857Mola_mola
ENSELUG00000021071rpa110062.621ENSMODG00000010549RPA19962.460Monodelphis_domestica
ENSELUG00000021071rpa19981.322ENSMALG00000011453rpa19981.322Monopterus_albus
ENSELUG00000021071rpa19966.814ENSMALG00000001208RPA18866.814Monopterus_albus
ENSELUG00000021071rpa19962.075MGP_CAROLIEiJ_G0016734Rpa19961.912Mus_caroli
ENSELUG00000021071rpa19961.576ENSMUSG00000000751Rpa19961.415Mus_musculus
ENSELUG00000021071rpa19962.036MGP_PahariEiJ_G0017871Rpa19962.319Mus_pahari
ENSELUG00000021071rpa19961.477MGP_SPRETEiJ_G0017577Rpa19961.316Mus_spretus
ENSELUG00000021071rpa19961.201ENSMPUG00000013119RPA19961.039Mustela_putorius_furo
ENSELUG00000021071rpa19960.386ENSMLUG00000006113RPA19960.225Myotis_lucifugus
ENSELUG00000021071rpa19562.988ENSNGAG00000004522Rpa19462.818Nannospalax_galili
ENSELUG00000021071rpa19480.420ENSNBRG00000020595rpa19980.420Neolamprologus_brichardi
ENSELUG00000021071rpa19861.628ENSNBRG00000009672RPA19761.628Neolamprologus_brichardi
ENSELUG00000021071rpa19961.389ENSNLEG00000017149RPA19961.551Nomascus_leucogenys
ENSELUG00000021071rpa19854.801ENSMEUG00000006714RPA19954.636Notamacropus_eugenii
ENSELUG00000021071rpa19561.371ENSODEG00000009038RPA19761.102Octodon_degus
ENSELUG00000021071rpa19979.579ENSONIG00000013135rpa19979.579Oreochromis_niloticus
ENSELUG00000021071rpa19664.381ENSOANG00000010880RPA19864.214Ornithorhynchus_anatinus
ENSELUG00000021071rpa19959.443ENSOCUG00000001504RPA19959.288Oryctolagus_cuniculus
ENSELUG00000021071rpa19958.321ENSORLG00000003368RPA19958.321Oryzias_latipes
ENSELUG00000021071rpa19979.339ENSORLG00000004856rpa19979.339Oryzias_latipes
ENSELUG00000021071rpa19979.339ENSORLG00020008980rpa19979.339Oryzias_latipes_hni
ENSELUG00000021071rpa19956.822ENSORLG00020015284RPA19956.822Oryzias_latipes_hni
ENSELUG00000021071rpa19979.339ENSORLG00015013982rpa19979.339Oryzias_latipes_hsok
ENSELUG00000021071rpa19958.540ENSORLG00015020383RPA19958.540Oryzias_latipes_hsok
ENSELUG00000021071rpa17165.438ENSORLG00015005867-9865.438Oryzias_latipes_hsok
ENSELUG00000021071rpa19975.868ENSOMEG00000004704rpa19975.868Oryzias_melastigma
ENSELUG00000021071rpa19460.209ENSOMEG00000011040RPA19960.209Oryzias_melastigma
ENSELUG00000021071rpa17672.727ENSOGAG00000029379-9774.566Otolemur_garnettii
ENSELUG00000021071rpa19961.301ENSOGAG00000005581-9961.138Otolemur_garnettii
ENSELUG00000021071rpa19961.489ENSOARG00000014479RPA19961.650Ovis_aries
ENSELUG00000021071rpa19961.812ENSPPAG00000039680RPA19961.974Pan_paniscus
ENSELUG00000021071rpa19960.552ENSPPRG00000011807RPA19960.390Panthera_pardus
ENSELUG00000021071rpa19960.552ENSPTIG00000007898RPA19960.390Panthera_tigris_altaica
ENSELUG00000021071rpa19962.036ENSPTRG00000008539RPA19962.197Pan_troglodytes
ENSELUG00000021071rpa19961.551ENSPANG00000024592RPA19961.812Papio_anubis
ENSELUG00000021071rpa19975.163ENSPKIG00000008053rpa19975.817Paramormyrops_kingsleyae
ENSELUG00000021071rpa19763.621ENSPSIG00000015617RPA19963.621Pelodiscus_sinensis
ENSELUG00000021071rpa19959.446ENSPMGG00000000543RPA19961.199Periophthalmus_magnuspinnatus
ENSELUG00000021071rpa19976.333ENSPMGG00000011589rpa19976.333Periophthalmus_magnuspinnatus
ENSELUG00000021071rpa19962.704ENSPEMG00000021061Rpa19962.541Peromyscus_maniculatus_bairdii
ENSELUG00000021071rpa110062.036ENSPCIG00000019049RPA19962.136Phascolarctos_cinereus
ENSELUG00000021071rpa19978.607ENSPFOG00000003987rpa19978.607Poecilia_formosa
ENSELUG00000021071rpa19978.773ENSPLAG00000004984rpa19978.773Poecilia_latipinna
ENSELUG00000021071rpa19459.289ENSPLAG00000008844-9759.289Poecilia_latipinna
ENSELUG00000021071rpa19978.607ENSPMEG00000020602rpa19978.607Poecilia_mexicana
ENSELUG00000021071rpa19459.128ENSPMEG00000003627-9759.128Poecilia_mexicana
ENSELUG00000021071rpa19371.048ENSPREG00000010174rpa19570.922Poecilia_reticulata
ENSELUG00000021071rpa19956.296ENSPREG00000010119RPA110056.366Poecilia_reticulata
ENSELUG00000021071rpa19961.664ENSPCOG00000001799RPA19961.501Propithecus_coquereli
ENSELUG00000021071rpa19961.102ENSPVAG00000002149RPA19960.940Pteropus_vampyrus
ENSELUG00000021071rpa19962.813ENSPNYG00000024165RPA19962.813Pundamilia_nyererei
ENSELUG00000021071rpa19981.023ENSPNYG00000016316rpa19981.023Pundamilia_nyererei
ENSELUG00000021071rpa19869.833ENSPNAG00000008599rpa19670.957Pygocentrus_nattereri
ENSELUG00000021071rpa19669.417ENSRNOG00000003123Rpa19962.418Rattus_norvegicus
ENSELUG00000021071rpa19961.688ENSRBIG00000036587RPA19961.526Rhinopithecus_bieti
ENSELUG00000021071rpa19956.981ENSRROG00000043278RPA19956.818Rhinopithecus_roxellana
ENSELUG00000021071rpa19931.161YAR007CRFA19931.122Saccharomyces_cerevisiae
ENSELUG00000021071rpa19161.744ENSSBOG00000030233RPA19762.032Saimiri_boliviensis_boliviensis
ENSELUG00000021071rpa19961.974ENSSHAG00000007969RPA19962.806Sarcophilus_harrisii
ENSELUG00000021071rpa19980.858ENSSFOG00015005362rpa19280.693Scleropages_formosus
ENSELUG00000021071rpa19958.006ENSSMAG00000019746RPA110058.912Scophthalmus_maximus
ENSELUG00000021071rpa19957.709ENSSDUG00000016358RPA110057.269Seriola_dumerili
ENSELUG00000021071rpa19980.858ENSSDUG00000011949rpa19980.858Seriola_dumerili
ENSELUG00000021071rpa19953.353ENSSLDG00000020784RPA110053.790Seriola_lalandi_dorsalis
ENSELUG00000021071rpa19981.023ENSSLDG00000011806rpa19981.023Seriola_lalandi_dorsalis
ENSELUG00000021071rpa19651.092ENSSARG00000007506RPA19851.092Sorex_araneus
ENSELUG00000021071rpa19663.069ENSSPUG00000007223RPA19863.069Sphenodon_punctatus
ENSELUG00000021071rpa19980.693ENSSPAG00000009903rpa19980.693Stegastes_partitus
ENSELUG00000021071rpa19862.982ENSSPAG00000011165RPA110061.386Stegastes_partitus
ENSELUG00000021071rpa19961.779ENSSSCG00000017822RPA19862.752Sus_scrofa
ENSELUG00000021071rpa19961.626ENSTGUG00000005775RPA19961.626Taeniopygia_guttata
ENSELUG00000021071rpa19977.243ENSTRUG00000003616rpa19977.243Takifugu_rubripes
ENSELUG00000021071rpa19969.393ENSTRUG00000000405RPA18868.539Takifugu_rubripes
ENSELUG00000021071rpa19978.803ENSTNIG00000016199rpa19978.896Tetraodon_nigroviridis
ENSELUG00000021071rpa17268.182ENSTBEG00000002709RPA17467.955Tupaia_belangeri
ENSELUG00000021071rpa19960.778ENSTTRG00000001169RPA19960.940Tursiops_truncatus
ENSELUG00000021071rpa18873.077ENSUAMG00000015676RPA19773.077Ursus_americanus
ENSELUG00000021071rpa19961.386ENSUMAG00000009328RPA19961.426Ursus_maritimus
ENSELUG00000021071rpa19960.164ENSVPAG00000009443RPA19960.000Vicugna_pacos
ENSELUG00000021071rpa19960.518ENSVVUG00000021715RPA19961.003Vulpes_vulpes
ENSELUG00000021071rpa19966.010ENSXETG00000013538rpa19966.118Xenopus_tropicalis
ENSELUG00000021071rpa19561.217ENSXCOG00000009899-9961.217Xiphophorus_couchianus
ENSELUG00000021071rpa19376.950ENSXCOG00000010068rpa19478.716Xiphophorus_couchianus
ENSELUG00000021071rpa19767.174ENSXMAG00000010333RPA18467.174Xiphophorus_maculatus
ENSELUG00000021071rpa19977.612ENSXMAG00000004102rpa19979.004Xiphophorus_maculatus

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