EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000021094 (Gene tree)
Gene ID: 105011893
Gene Symbol: prpf38a
Alias: fa04h11|fc83e08|wu:fa04h11|wu:fc83e08|zgc:92059
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 8736 bases
Position: chrLG08:29739115-29747850
Accession: 105011893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000022074	PRP38	PF03371.15	6.9e-62	1	1
ENSELUP00000022083	PRP38	PF03371.15	6.9e-62	1	1
ENSELUP00000040546	PRP38	PF03371.15	7.7e-62	1	1
ENSELUP00000022052	PRP38	PF03371.15	4.5e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000032910	-	4314	XM_010872332	ENSELUP00000040546	309 (aa)	XP_010870634	UPI0005761483
ENSELUT00000032926	-	1534	-	ENSELUP00000022083	295 (aa)	-	-
ENSELUT00000032887	-	861	-	ENSELUP00000022052	286 (aa)	-	-
ENSELUT00000032917	-	4468	-	ENSELUP00000022074	295 (aa)	-	-

Gene Model

Click here to download ENSELUG00000021094's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000021094's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000021094	prpf38a	100	80.511	ENSG00000134748	PRPF38A	71	86.878	Homo_sapiens
ENSELUG00000021094	prpf38a	100	94.822	ENSAPOG00000011652	prpf38a	100	94.822	Acanthochromis_polyacanthus
ENSELUG00000021094	prpf38a	100	80.511	ENSAMEG00000009319	PRPF38A	71	86.878	Ailuropoda_melanoleuca
ENSELUG00000021094	prpf38a	75	90.541	ENSACIG00000012292	prpf38a	73	90.541	Amphilophus_citrinellus
ENSELUG00000021094	prpf38a	100	94.822	ENSAOCG00000018004	prpf38a	100	94.822	Amphiprion_ocellaris
ENSELUG00000021094	prpf38a	100	94.822	ENSAPEG00000021414	prpf38a	100	94.822	Amphiprion_percula
ENSELUG00000021094	prpf38a	100	93.528	ENSATEG00000004608	prpf38a	72	92.308	Anabas_testudineus
ENSELUG00000021094	prpf38a	79	75.806	ENSAPLG00000005827	PRPF38A	63	82.051	Anas_platyrhynchos
ENSELUG00000021094	prpf38a	100	79.872	ENSACAG00000008249	PRPF38A	71	85.973	Anolis_carolinensis
ENSELUG00000021094	prpf38a	100	80.511	ENSANAG00000027839	PRPF38A	71	86.878	Aotus_nancymaae
ENSELUG00000021094	prpf38a	100	59.683	ENSANAG00000029204	-	70	55.556	Aotus_nancymaae
ENSELUG00000021094	prpf38a	100	94.822	ENSACLG00000021595	prpf38a	100	94.822	Astatotilapia_calliptera
ENSELUG00000021094	prpf38a	100	84.984	ENSAMXG00000029274	prpf38a	71	95.023	Astyanax_mexicanus
ENSELUG00000021094	prpf38a	100	80.511	ENSBTAG00000002720	PRPF38A	75	86.878	Bos_taurus
ENSELUG00000021094	prpf38a	69	62.755	WBGene00008380	prp-38	59	65.426	Caenorhabditis_elegans
ENSELUG00000021094	prpf38a	100	80.511	ENSCJAG00000021594	PRPF38A	74	86.878	Callithrix_jacchus
ENSELUG00000021094	prpf38a	100	80.511	ENSCAFG00000003740	PRPF38A	71	86.878	Canis_familiaris
ENSELUG00000021094	prpf38a	100	80.511	ENSCAFG00020010939	PRPF38A	71	86.878	Canis_lupus_dingo
ENSELUG00000021094	prpf38a	100	80.511	ENSCHIG00000024730	PRPF38A	71	86.878	Capra_hircus
ENSELUG00000021094	prpf38a	100	80.511	ENSTSYG00000009868	-	71	86.878	Carlito_syrichta
ENSELUG00000021094	prpf38a	86	76.667	ENSTSYG00000031994	-	63	83.146	Carlito_syrichta
ENSELUG00000021094	prpf38a	100	82.315	ENSCPOG00000005079	PRPF38A	71	86.878	Cavia_porcellus
ENSELUG00000021094	prpf38a	100	78.205	ENSCCAG00000026502	PRPF38A	71	86.878	Cebus_capucinus
ENSELUG00000021094	prpf38a	97	52.595	ENSCATG00000044190	-	57	54.255	Cercocebus_atys
ENSELUG00000021094	prpf38a	100	80.511	ENSCATG00000032296	PRPF38A	71	86.878	Cercocebus_atys
ENSELUG00000021094	prpf38a	100	80.511	ENSCLAG00000005816	PRPF38A	71	86.878	Chinchilla_lanigera
ENSELUG00000021094	prpf38a	100	79.872	ENSCPBG00000014791	PRPF38A	71	85.973	Chrysemys_picta_bellii
ENSELUG00000021094	prpf38a	78	68.831	ENSCSAVG00000009580	-	62	76.064	Ciona_savignyi
ENSELUG00000021094	prpf38a	78	86.147	ENSCANG00000032608	PRPF38A	74	86.878	Colobus_angolensis_palliatus
ENSELUG00000021094	prpf38a	100	80.511	ENSCGRG00001018502	-	71	86.878	Cricetulus_griseus_chok1gshd
ENSELUG00000021094	prpf38a	88	70.498	ENSCGRG00001002557	-	74	73.756	Cricetulus_griseus_chok1gshd
ENSELUG00000021094	prpf38a	100	80.511	ENSCGRG00000014868	Prpf38a	71	86.878	Cricetulus_griseus_crigri
ENSELUG00000021094	prpf38a	75	90.045	ENSCSEG00000001269	prpf38a	76	90.045	Cynoglossus_semilaevis
ENSELUG00000021094	prpf38a	75	93.665	ENSCVAG00000012305	prpf38a	72	93.665	Cyprinodon_variegatus
ENSELUG00000021094	prpf38a	100	84.984	ENSDARG00000039213	prpf38a	71	94.570	Danio_rerio
ENSELUG00000021094	prpf38a	100	80.511	ENSDNOG00000042326	PRPF38A	72	86.878	Dasypus_novemcinctus
ENSELUG00000021094	prpf38a	88	74.046	ENSDORG00000023691	-	75	80.275	Dipodomys_ordii
ENSELUG00000021094	prpf38a	85	96.875	ENSDORG00000023857	-	64	96.875	Dipodomys_ordii
ENSELUG00000021094	prpf38a	88	74.046	ENSDORG00000025371	-	75	80.275	Dipodomys_ordii
ENSELUG00000021094	prpf38a	73	68.421	FBgn0050342	Prp38	57	73.404	Drosophila_melanogaster
ENSELUG00000021094	prpf38a	80	80.753	ENSEBUG00000012588	prpf38a	71	80.717	Eptatretus_burgeri
ENSELUG00000021094	prpf38a	100	80.511	ENSEASG00005014427	PRPF38A	71	86.878	Equus_asinus_asinus
ENSELUG00000021094	prpf38a	100	80.511	ENSECAG00000022628	PRPF38A	71	86.878	Equus_caballus
ENSELUG00000021094	prpf38a	100	80.511	ENSFCAG00000002518	PRPF38A	71	86.878	Felis_catus
ENSELUG00000021094	prpf38a	100	74.411	ENSFALG00000003612	-	73	80.734	Ficedula_albicollis
ENSELUG00000021094	prpf38a	87	76.838	ENSFALG00000005598	-	66	82.778	Ficedula_albicollis
ENSELUG00000021094	prpf38a	100	81.994	ENSFDAG00000011287	PRPF38A	72	86.878	Fukomys_damarensis
ENSELUG00000021094	prpf38a	95	81.362	ENSFHEG00000014317	prpf38a	75	92.308	Fundulus_heteroclitus
ENSELUG00000021094	prpf38a	61	93.103	ENSGMOG00000011384	prpf38a	54	97.590	Gadus_morhua
ENSELUG00000021094	prpf38a	100	80.192	ENSGALG00000010627	PRPF38A	71	86.425	Gallus_gallus
ENSELUG00000021094	prpf38a	75	92.760	ENSGAFG00000012422	prpf38a	72	92.760	Gambusia_affinis
ENSELUG00000021094	prpf38a	75	91.480	ENSGACG00000005423	prpf38a	72	91.480	Gasterosteus_aculeatus
ENSELUG00000021094	prpf38a	54	92.308	ENSGACG00000000182	-	99	92.308	Gasterosteus_aculeatus
ENSELUG00000021094	prpf38a	100	80.192	ENSGAGG00000020547	PRPF38A	71	86.425	Gopherus_agassizii
ENSELUG00000021094	prpf38a	100	80.511	ENSGGOG00000003940	PRPF38A	71	86.878	Gorilla_gorilla
ENSELUG00000021094	prpf38a	69	90.355	ENSHBUG00000020572	prpf38a	80	94.149	Haplochromis_burtoni
ENSELUG00000021094	prpf38a	100	80.511	ENSHGLG00000000475	PRPF38A	71	86.878	Heterocephalus_glaber_female
ENSELUG00000021094	prpf38a	100	73.312	ENSHGLG00000007918	-	71	75.113	Heterocephalus_glaber_female
ENSELUG00000021094	prpf38a	100	80.511	ENSHGLG00100008935	PRPF38A	71	86.878	Heterocephalus_glaber_male
ENSELUG00000021094	prpf38a	100	73.312	ENSHGLG00100003928	-	71	75.113	Heterocephalus_glaber_male
ENSELUG00000021094	prpf38a	66	87.895	ENSHCOG00000020781	prpf38a	59	92.021	Hippocampus_comes
ENSELUG00000021094	prpf38a	95	81.720	ENSIPUG00000005757	prpf38a	71	93.694	Ictalurus_punctatus
ENSELUG00000021094	prpf38a	100	80.511	ENSSTOG00000015610	PRPF38A	71	86.878	Ictidomys_tridecemlineatus
ENSELUG00000021094	prpf38a	100	80.192	ENSJJAG00000015811	Prpf38a	71	86.425	Jaculus_jaculus
ENSELUG00000021094	prpf38a	75	94.118	ENSKMAG00000006588	prpf38a	72	94.118	Kryptolebias_marmoratus
ENSELUG00000021094	prpf38a	100	95.146	ENSLBEG00000020585	prpf38a	100	95.146	Labrus_bergylta
ENSELUG00000021094	prpf38a	100	80.831	ENSLACG00000011495	PRPF38A	71	86.425	Latimeria_chalumnae
ENSELUG00000021094	prpf38a	100	92.903	ENSLOCG00000006262	prpf38a	72	91.892	Lepisosteus_oculatus
ENSELUG00000021094	prpf38a	100	80.511	ENSLAFG00000025862	PRPF38A	71	86.878	Loxodonta_africana
ENSELUG00000021094	prpf38a	100	80.511	ENSMFAG00000039449	PRPF38A	74	86.878	Macaca_fascicularis
ENSELUG00000021094	prpf38a	87	77.574	ENSMMUG00000014333	PRPF38A	65	83.425	Macaca_mulatta
ENSELUG00000021094	prpf38a	100	80.511	ENSMNEG00000031221	PRPF38A	71	86.878	Macaca_nemestrina
ENSELUG00000021094	prpf38a	97	52.249	ENSMNEG00000040242	-	57	54.787	Macaca_nemestrina
ENSELUG00000021094	prpf38a	100	80.511	ENSMLEG00000041105	PRPF38A	71	86.878	Mandrillus_leucophaeus
ENSELUG00000021094	prpf38a	100	94.822	ENSMAMG00000015431	prpf38a	100	94.822	Mastacembelus_armatus
ENSELUG00000021094	prpf38a	100	94.822	ENSMZEG00005017838	prpf38a	100	94.822	Maylandia_zebra
ENSELUG00000021094	prpf38a	78	85.714	ENSMGAG00000011176	PRPF38A	74	86.425	Meleagris_gallopavo
ENSELUG00000021094	prpf38a	89	81.818	ENSMAUG00000018029	-	84	82.353	Mesocricetus_auratus
ENSELUG00000021094	prpf38a	100	80.511	ENSMICG00000014193	PRPF38A	71	86.878	Microcebus_murinus
ENSELUG00000021094	prpf38a	100	80.511	ENSMOCG00000013080	Prpf38a	71	86.878	Microtus_ochrogaster
ENSELUG00000021094	prpf38a	100	87.781	ENSMMOG00000016972	prpf38a	85	87.405	Mola_mola
ENSELUG00000021094	prpf38a	100	78.662	ENSMODG00000000644	PRPF38A	71	85.586	Monodelphis_domestica
ENSELUG00000021094	prpf38a	100	95.793	ENSMALG00000019363	prpf38a	97	95.793	Monopterus_albus
ENSELUG00000021094	prpf38a	100	80.192	MGP_CAROLIEiJ_G0026269	Prpf38a	71	86.425	Mus_caroli
ENSELUG00000021094	prpf38a	100	80.192	ENSMUSG00000063800	Prpf38a	71	86.425	Mus_musculus
ENSELUG00000021094	prpf38a	100	80.192	MGP_PahariEiJ_G0028602	Prpf38a	71	86.425	Mus_pahari
ENSELUG00000021094	prpf38a	100	79.872	MGP_SPRETEiJ_G0027238	Prpf38a	93	90.426	Mus_spretus
ENSELUG00000021094	prpf38a	100	80.511	ENSMPUG00000006896	PRPF38A	71	86.878	Mustela_putorius_furo
ENSELUG00000021094	prpf38a	100	82.637	ENSNGAG00000011884	Prpf38a	72	86.878	Nannospalax_galili
ENSELUG00000021094	prpf38a	75	91.892	ENSNBRG00000004013	prpf38a	71	91.892	Neolamprologus_brichardi
ENSELUG00000021094	prpf38a	100	62.207	ENSNLEG00000012592	-	70	57.456	Nomascus_leucogenys
ENSELUG00000021094	prpf38a	97	55.326	ENSNLEG00000033398	-	60	50.228	Nomascus_leucogenys
ENSELUG00000021094	prpf38a	93	79.310	ENSNLEG00000017999	PRPF38A	63	85.859	Nomascus_leucogenys
ENSELUG00000021094	prpf38a	100	77.955	ENSMEUG00000003860	PRPF38A	71	83.258	Notamacropus_eugenii
ENSELUG00000021094	prpf38a	77	86.404	ENSOPRG00000008985	PRPF38A	92	86.878	Ochotona_princeps
ENSELUG00000021094	prpf38a	100	80.511	ENSODEG00000005869	PRPF38A	71	86.878	Octodon_degus
ENSELUG00000021094	prpf38a	100	94.498	ENSONIG00000007816	prpf38a	100	94.498	Oreochromis_niloticus
ENSELUG00000021094	prpf38a	78	44.206	ENSOANG00000009541	-	71	42.857	Ornithorhynchus_anatinus
ENSELUG00000021094	prpf38a	100	80.511	ENSOCUG00000000963	PRPF38A	71	86.878	Oryctolagus_cuniculus
ENSELUG00000021094	prpf38a	100	93.559	ENSORLG00000013485	prpf38a	79	93.213	Oryzias_latipes
ENSELUG00000021094	prpf38a	100	93.559	ENSORLG00020002130	prpf38a	79	93.213	Oryzias_latipes_hni
ENSELUG00000021094	prpf38a	100	93.220	ENSORLG00015021393	prpf38a	75	92.760	Oryzias_latipes_hsok
ENSELUG00000021094	prpf38a	100	93.204	ENSOMEG00000016333	prpf38a	72	92.760	Oryzias_melastigma
ENSELUG00000021094	prpf38a	100	80.511	ENSOGAG00000005423	PRPF38A	71	86.878	Otolemur_garnettii
ENSELUG00000021094	prpf38a	100	80.511	ENSOARG00000005373	PRPF38A	71	86.878	Ovis_aries
ENSELUG00000021094	prpf38a	100	80.511	ENSPPAG00000030905	PRPF38A	71	86.878	Pan_paniscus
ENSELUG00000021094	prpf38a	97	68.041	ENSPPAG00000033867	-	68	68.778	Pan_paniscus
ENSELUG00000021094	prpf38a	100	80.511	ENSPPRG00000013268	PRPF38A	71	86.878	Panthera_pardus
ENSELUG00000021094	prpf38a	100	80.511	ENSPTIG00000015419	PRPF38A	71	86.878	Panthera_tigris_altaica
ENSELUG00000021094	prpf38a	100	80.511	ENSPTRG00000000739	PRPF38A	74	86.878	Pan_troglodytes
ENSELUG00000021094	prpf38a	100	80.511	ENSPANG00000015483	PRPF38A	71	86.878	Papio_anubis
ENSELUG00000021094	prpf38a	100	94.175	ENSPKIG00000011439	prpf38a	72	93.213	Paramormyrops_kingsleyae
ENSELUG00000021094	prpf38a	100	79.553	ENSPSIG00000017487	PRPF38A	71	85.520	Pelodiscus_sinensis
ENSELUG00000021094	prpf38a	83	84.836	ENSPMGG00000021352	prpf38a	78	88.938	Periophthalmus_magnuspinnatus
ENSELUG00000021094	prpf38a	100	80.511	ENSPEMG00000023277	-	71	86.878	Peromyscus_maniculatus_bairdii
ENSELUG00000021094	prpf38a	100	79.365	ENSPEMG00000011212	-	70	80.269	Peromyscus_maniculatus_bairdii
ENSELUG00000021094	prpf38a	51	85.517	ENSPMAG00000005561	prpf38a	100	90.511	Petromyzon_marinus
ENSELUG00000021094	prpf38a	100	78.344	ENSPCIG00000022369	-	71	85.135	Phascolarctos_cinereus
ENSELUG00000021094	prpf38a	100	85.577	ENSPFOG00000004248	prpf38a	72	92.760	Poecilia_formosa
ENSELUG00000021094	prpf38a	96	81.119	ENSPLAG00000010328	prpf38a	72	92.760	Poecilia_latipinna
ENSELUG00000021094	prpf38a	96	81.119	ENSPMEG00000011804	prpf38a	72	92.760	Poecilia_mexicana
ENSELUG00000021094	prpf38a	99	78.859	ENSPREG00000002835	prpf38a	58	95.213	Poecilia_reticulata
ENSELUG00000021094	prpf38a	100	72.642	ENSPPYG00000001348	PRPF38A	71	75.664	Pongo_abelii
ENSELUG00000021094	prpf38a	100	80.192	ENSPCAG00000013328	PRPF38A	71	86.425	Procavia_capensis
ENSELUG00000021094	prpf38a	100	66.990	ENSPCOG00000020709	-	73	74.208	Propithecus_coquereli
ENSELUG00000021094	prpf38a	100	80.511	ENSPCOG00000016387	-	71	86.878	Propithecus_coquereli
ENSELUG00000021094	prpf38a	100	80.511	ENSPVAG00000009803	PRPF38A	71	86.878	Pteropus_vampyrus
ENSELUG00000021094	prpf38a	100	94.822	ENSPNYG00000005571	prpf38a	100	94.822	Pundamilia_nyererei
ENSELUG00000021094	prpf38a	100	84.026	ENSPNAG00000010399	prpf38a	71	93.665	Pygocentrus_nattereri
ENSELUG00000021094	prpf38a	100	80.831	ENSRNOG00000009451	Prpf38a	71	87.330	Rattus_norvegicus
ENSELUG00000021094	prpf38a	100	80.511	ENSRBIG00000036442	PRPF38A	74	86.878	Rhinopithecus_bieti
ENSELUG00000021094	prpf38a	100	80.511	ENSRROG00000032788	PRPF38A	71	86.878	Rhinopithecus_roxellana
ENSELUG00000021094	prpf38a	100	68.350	ENSRROG00000040003	-	72	70.136	Rhinopithecus_roxellana
ENSELUG00000021094	prpf38a	100	80.511	ENSSBOG00000019515	PRPF38A	71	86.878	Saimiri_boliviensis_boliviensis
ENSELUG00000021094	prpf38a	99	65.320	ENSSHAG00000006029	-	74	75.113	Sarcophilus_harrisii
ENSELUG00000021094	prpf38a	86	75.368	ENSSHAG00000006906	-	66	82.222	Sarcophilus_harrisii
ENSELUG00000021094	prpf38a	100	93.548	ENSSFOG00015013572	prpf38a	72	90.541	Scleropages_formosus
ENSELUG00000021094	prpf38a	75	95.023	ENSSMAG00000015379	prpf38a	72	95.023	Scophthalmus_maximus
ENSELUG00000021094	prpf38a	100	96.764	ENSSDUG00000001324	prpf38a	100	96.764	Seriola_dumerili
ENSELUG00000021094	prpf38a	100	96.764	ENSSLDG00000014803	prpf38a	100	96.764	Seriola_lalandi_dorsalis
ENSELUG00000021094	prpf38a	100	63.898	ENSSARG00000014458	PRPF38A	71	63.348	Sorex_araneus
ENSELUG00000021094	prpf38a	100	79.872	ENSSPUG00000013259	PRPF38A	71	85.973	Sphenodon_punctatus
ENSELUG00000021094	prpf38a	75	75.566	ENSSPAG00000010449	prpf38a	68	75.676	Stegastes_partitus
ENSELUG00000021094	prpf38a	100	80.511	ENSSSCG00000028288	PRPF38A	71	86.878	Sus_scrofa
ENSELUG00000021094	prpf38a	100	76.038	ENSTGUG00000008995	PRPF38A	71	80.543	Taeniopygia_guttata
ENSELUG00000021094	prpf38a	75	93.665	ENSTRUG00000003374	prpf38a	68	93.665	Takifugu_rubripes
ENSELUG00000021094	prpf38a	100	92.605	ENSTNIG00000005533	prpf38a	100	92.605	Tetraodon_nigroviridis
ENSELUG00000021094	prpf38a	100	79.872	ENSTBEG00000000725	PRPF38A	71	86.878	Tupaia_belangeri
ENSELUG00000021094	prpf38a	100	80.511	ENSTTRG00000016139	PRPF38A	71	86.878	Tursiops_truncatus
ENSELUG00000021094	prpf38a	100	80.511	ENSUAMG00000000625	PRPF38A	71	86.878	Ursus_americanus
ENSELUG00000021094	prpf38a	100	80.511	ENSUMAG00000022674	PRPF38A	71	86.878	Ursus_maritimus
ENSELUG00000021094	prpf38a	78	85.714	ENSVPAG00000000907	PRPF38A	71	86.425	Vicugna_pacos
ENSELUG00000021094	prpf38a	100	80.511	ENSVVUG00000004475	PRPF38A	71	86.878	Vulpes_vulpes
ENSELUG00000021094	prpf38a	100	78.981	ENSXETG00000008060	prpf38a	71	82.805	Xenopus_tropicalis
ENSELUG00000021094	prpf38a	76	90.708	ENSXCOG00000007393	prpf38a	75	90.708	Xiphophorus_couchianus
ENSELUG00000021094	prpf38a	75	92.760	ENSXMAG00000026143	prpf38a	72	92.760	Xiphophorus_maculatus