EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000021108 (Gene tree)
Gene ID: 105027512
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 8642 bases
Position: chrLG04:7428630-7437271
Accession: 105027512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000040588	Gar1	PF04410.14	8e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000042138	-	5255	XM_010899647	ENSELUP00000040588	221 (aa)	XP_010897949	UPI0005765F6B

Gene Model

Click here to download ENSELUG00000021108's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000021108's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000021108	gar1	67	82.993	ENSCVAG00000002103	gar1	50	96.154	Cyprinodon_variegatus
ENSELUG00000021108	gar1	73	69.136	ENSLACG00000003306	GAR1	62	87.379	Latimeria_chalumnae
ENSELUG00000021108	gar1	67	79.592	ENSMMOG00000004156	gar1	51	93.269	Mola_mola
ENSELUG00000021108	gar1	50	86.486	ENSMODG00000005897	GAR1	76	69.231	Monodelphis_domestica
ENSELUG00000021108	gar1	50	90.000	ENSMUSG00000028010	Gar1	66	94.231	Mus_musculus
ENSELUG00000021108	gar1	50	90.000	MGP_PahariEiJ_G0027076	Gar1	66	94.231	Mus_pahari
ENSELUG00000021108	gar1	50	90.000	MGP_SPRETEiJ_G0026580	Gar1	66	94.231	Mus_spretus
ENSELUG00000021108	gar1	65	63.889	ENSNLEG00000034282	-	52	74.038	Nomascus_leucogenys
ENSELUG00000021108	gar1	67	80.952	ENSPMEG00000009320	gar1	50	93.269	Poecilia_mexicana
ENSELUG00000021108	gar1	69	60.526	ENSRROG00000044348	-	69	62.500	Rhinopithecus_roxellana
ENSELUG00000021108	gar1	65	76.389	ENSSPUG00000008707	GAR1	58	92.233	Sphenodon_punctatus