EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000021216 (Gene tree)
Gene ID: 105008921
Gene Symbol: -
Alias: -
Full Name: serrate RNA effector molecule homolog
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 25006 bases
Position: chrAZJR03000850.1:333696-358701
Accession: 105008921
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000022238	ARS2	PF04959.13	1.5e-80	1	1
ENSELUP00000040668	ARS2	PF04959.13	1.5e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000033147	-	3427	XM_010868287	ENSELUP00000040668	883 (aa)	XP_010866589	-
ENSELUT00000042186	-	3300	XM_010868288	ENSELUP00000022238	883 (aa)	XP_010866590	-

Gene Model

Click here to download ENSELUG00000021216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000021216's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000021216	-	96	59.127	ENSELUG00000006651	srrt	92	58.960

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000021216	-	53	65.401	ENSG00000087087	SRRT	98	73.913	Homo_sapiens
ENSELUG00000021216	-	53	68.443	ENSAPOG00000002304	srrt	93	59.717	Acanthochromis_polyacanthus
ENSELUG00000021216	-	53	65.254	ENSAMEG00000014506	SRRT	51	64.407	Ailuropoda_melanoleuca
ENSELUG00000021216	-	83	68.443	ENSACIG00000015795	srrt	87	69.083	Amphilophus_citrinellus
ENSELUG00000021216	-	93	66.707	ENSAOCG00000009189	-	93	67.900	Amphiprion_ocellaris
ENSELUG00000021216	-	78	68.443	ENSAOCG00000009693	srrt	93	59.740	Amphiprion_ocellaris
ENSELUG00000021216	-	78	68.230	ENSAPEG00000003646	srrt	93	58.872	Amphiprion_percula
ENSELUG00000021216	-	93	66.707	ENSAPEG00000020016	-	93	67.900	Amphiprion_percula
ENSELUG00000021216	-	60	70.950	ENSATEG00000003652	-	96	71.852	Anabas_testudineus
ENSELUG00000021216	-	78	67.735	ENSATEG00000014425	srrt	86	67.635	Anabas_testudineus
ENSELUG00000021216	-	53	65.672	ENSACAG00000001014	SRRT	93	56.100	Anolis_carolinensis
ENSELUG00000021216	-	53	64.449	ENSANAG00000031718	SRRT	93	55.753	Aotus_nancymaae
ENSELUG00000021216	-	93	65.768	ENSACLG00000009423	-	93	67.769	Astatotilapia_calliptera
ENSELUG00000021216	-	94	58.734	ENSACLG00000013156	srrt	89	58.941	Astatotilapia_calliptera
ENSELUG00000021216	-	52	66.883	ENSAMXG00000016671	srrt	89	56.956	Astyanax_mexicanus
ENSELUG00000021216	-	53	64.241	ENSBTAG00000001134	SRRT	93	55.412	Bos_taurus
ENSELUG00000021216	-	68	41.905	WBGene00017085	E01A2.2	88	39.248	Caenorhabditis_elegans
ENSELUG00000021216	-	53	64.241	ENSCJAG00000014917	SRRT	93	55.569	Callithrix_jacchus
ENSELUG00000021216	-	96	56.314	ENSCAFG00000023538	SRRT	93	55.830	Canis_familiaris
ENSELUG00000021216	-	96	56.214	ENSCAFG00020013358	SRRT	97	53.946	Canis_lupus_dingo
ENSELUG00000021216	-	81	64.301	ENSCHIG00000010495	SRRT	93	55.023	Capra_hircus
ENSELUG00000021216	-	96	55.239	ENSTSYG00000036426	SRRT	96	54.653	Carlito_syrichta
ENSELUG00000021216	-	53	65.042	ENSCAPG00000013586	SRRT	97	56.057	Cavia_aperea
ENSELUG00000021216	-	53	63.975	ENSCPOG00000001739	SRRT	93	55.136	Cavia_porcellus
ENSELUG00000021216	-	53	64.449	ENSCCAG00000015877	SRRT	93	55.674	Cebus_capucinus
ENSELUG00000021216	-	53	64.449	ENSCATG00000036306	SRRT	94	55.233	Cercocebus_atys
ENSELUG00000021216	-	53	64.449	ENSCLAG00000007568	SRRT	89	60.041	Chinchilla_lanigera
ENSELUG00000021216	-	53	64.449	ENSCSAG00000017996	SRRT	93	55.713	Chlorocebus_sabaeus
ENSELUG00000021216	-	53	62.000	ENSCHOG00000007815	SRRT	64	62.000	Choloepus_hoffmanni
ENSELUG00000021216	-	69	64.574	ENSCPBG00000011553	SRRT	75	63.033	Chrysemys_picta_bellii
ENSELUG00000021216	-	100	40.948	ENSCING00000003506	-	55	51.553	Ciona_intestinalis
ENSELUG00000021216	-	100	40.152	ENSCSAVG00000008394	-	84	53.824	Ciona_savignyi
ENSELUG00000021216	-	53	64.301	ENSCANG00000034556	SRRT	93	55.608	Colobus_angolensis_palliatus
ENSELUG00000021216	-	96	56.716	ENSCGRG00001001594	Srrt	93	56.316	Cricetulus_griseus_chok1gshd
ENSELUG00000021216	-	89	61.250	ENSCGRG00000007292	Srrt	89	59.834	Cricetulus_griseus_crigri
ENSELUG00000021216	-	96	56.036	ENSCSEG00000017878	srrt	93	54.959	Cynoglossus_semilaevis
ENSELUG00000021216	-	90	66.416	ENSCVAG00000017344	-	91	65.947	Cyprinodon_variegatus
ENSELUG00000021216	-	53	68.803	ENSCVAG00000019848	srrt	93	59.268	Cyprinodon_variegatus
ENSELUG00000021216	-	53	69.083	ENSDARG00000017762	srrt	92	58.480	Danio_rerio
ENSELUG00000021216	-	53	64.449	ENSDNOG00000003851	SRRT	93	55.699	Dasypus_novemcinctus
ENSELUG00000021216	-	53	65.401	ENSDORG00000005584	Srrt	89	60.625	Dipodomys_ordii
ENSELUG00000021216	-	88	50.104	FBgn0033062	Ars2	71	52.463	Drosophila_melanogaster
ENSELUG00000021216	-	75	62.168	ENSETEG00000016175	SRRT	68	61.350	Echinops_telfairi
ENSELUG00000021216	-	65	60.000	ENSEBUG00000008517	-	76	60.000	Eptatretus_burgeri
ENSELUG00000021216	-	53	64.449	ENSEASG00005016956	SRRT	93	55.359	Equus_asinus_asinus
ENSELUG00000021216	-	53	64.449	ENSECAG00000012292	SRRT	93	55.359	Equus_caballus
ENSELUG00000021216	-	57	78.378	ENSEEUG00000009117	SRRT	70	61.357	Erinaceus_europaeus
ENSELUG00000021216	-	53	64.657	ENSFCAG00000006855	SRRT	93	55.713	Felis_catus
ENSELUG00000021216	-	53	61.538	ENSFDAG00000021347	SRRT	92	54.545	Fukomys_damarensis
ENSELUG00000021216	-	55	64.729	ENSFHEG00000004105	-	95	63.692	Fundulus_heteroclitus
ENSELUG00000021216	-	72	66.518	ENSFHEG00000002756	srrt	84	66.905	Fundulus_heteroclitus
ENSELUG00000021216	-	96	56.537	ENSGMOG00000018619	srrt	52	62.397	Gadus_morhua
ENSELUG00000021216	-	53	68.376	ENSGAFG00000005423	srrt	93	58.560	Gambusia_affinis
ENSELUG00000021216	-	93	64.855	ENSGAFG00000020383	-	93	65.269	Gambusia_affinis
ENSELUG00000021216	-	96	57.727	ENSGACG00000020387	srrt	92	57.615	Gasterosteus_aculeatus
ENSELUG00000021216	-	93	62.998	ENSGACG00000001100	-	54	72.107	Gasterosteus_aculeatus
ENSELUG00000021216	-	53	64.449	ENSGGOG00000001508	SRRT	93	55.726	Gorilla_gorilla
ENSELUG00000021216	-	53	68.017	ENSHBUG00000002942	srrt	89	59.176	Haplochromis_burtoni
ENSELUG00000021216	-	96	56.250	ENSHGLG00000008344	Srrt	89	59.834	Heterocephalus_glaber_female
ENSELUG00000021216	-	96	53.941	ENSHGLG00100018857	Srrt	89	59.916	Heterocephalus_glaber_male
ENSELUG00000021216	-	93	59.476	ENSHCOG00000008904	-	93	59.521	Hippocampus_comes
ENSELUG00000021216	-	98	59.065	ENSHCOG00000005403	srrt	93	57.757	Hippocampus_comes
ENSELUG00000021216	-	53	68.565	ENSIPUG00000021150	srrt	52	67.850	Ictalurus_punctatus
ENSELUG00000021216	-	53	64.301	ENSSTOG00000013776	SRRT	93	55.844	Ictidomys_tridecemlineatus
ENSELUG00000021216	-	96	56.193	ENSJJAG00000010446	Srrt	92	59.553	Jaculus_jaculus
ENSELUG00000021216	-	93	65.610	ENSKMAG00000008468	-	93	67.062	Kryptolebias_marmoratus
ENSELUG00000021216	-	94	58.831	ENSKMAG00000013599	srrt	93	59.412	Kryptolebias_marmoratus
ENSELUG00000021216	-	66	61.120	ENSLBEG00000028983	-	97	63.850	Labrus_bergylta
ENSELUG00000021216	-	96	56.636	ENSLBEG00000016308	srrt	82	67.364	Labrus_bergylta
ENSELUG00000021216	-	94	48.227	ENSLACG00000001089	SRRT	92	47.094	Latimeria_chalumnae
ENSELUG00000021216	-	71	68.323	ENSLOCG00000013658	srrt	78	67.385	Lepisosteus_oculatus
ENSELUG00000021216	-	53	64.449	ENSLAFG00000007725	SRRT	93	55.803	Loxodonta_africana
ENSELUG00000021216	-	53	64.301	ENSMFAG00000033745	SRRT	97	55.193	Macaca_fascicularis
ENSELUG00000021216	-	53	64.449	ENSMMUG00000021255	SRRT	93	55.713	Macaca_mulatta
ENSELUG00000021216	-	53	64.449	ENSMNEG00000041864	SRRT	94	55.193	Macaca_nemestrina
ENSELUG00000021216	-	53	64.301	ENSMLEG00000029479	SRRT	95	55.193	Mandrillus_leucophaeus
ENSELUG00000021216	-	93	67.654	ENSMAMG00000010681	-	93	69.176	Mastacembelus_armatus
ENSELUG00000021216	-	53	67.308	ENSMAMG00000014311	srrt	93	59.032	Mastacembelus_armatus
ENSELUG00000021216	-	93	65.768	ENSMZEG00005028002	-	93	67.769	Maylandia_zebra
ENSELUG00000021216	-	53	68.017	ENSMZEG00005016135	srrt	89	59.059	Maylandia_zebra
ENSELUG00000021216	-	53	64.033	ENSMAUG00000011386	Srrt	93	56.568	Mesocricetus_auratus
ENSELUG00000021216	-	53	64.449	ENSMICG00000009471	SRRT	95	55.193	Microcebus_murinus
ENSELUG00000021216	-	96	56.636	ENSMOCG00000001971	Srrt	93	56.686	Microtus_ochrogaster
ENSELUG00000021216	-	95	59.577	ENSMMOG00000016399	srrt	92	57.920	Mola_mola
ENSELUG00000021216	-	83	65.176	ENSMMOG00000011137	-	88	65.194	Mola_mola
ENSELUG00000021216	-	53	61.364	ENSMODG00000004862	SRRT	89	61.570	Monodelphis_domestica
ENSELUG00000021216	-	59	53.073	ENSMALG00000005567	-	87	55.422	Monopterus_albus
ENSELUG00000021216	-	88	56.015	ENSMALG00000018604	srrt	96	54.567	Monopterus_albus
ENSELUG00000021216	-	96	56.978	MGP_CAROLIEiJ_G0027870	Srrt	93	64.286	Mus_caroli
ENSELUG00000021216	-	96	56.978	ENSMUSG00000037364	Srrt	92	64.286	Mus_musculus
ENSELUG00000021216	-	96	57.176	MGP_PahariEiJ_G0024456	Srrt	93	64.286	Mus_pahari
ENSELUG00000021216	-	96	56.978	MGP_SPRETEiJ_G0028875	Srrt	93	64.286	Mus_spretus
ENSELUG00000021216	-	96	56.442	ENSMPUG00000015839	SRRT	93	55.699	Mustela_putorius_furo
ENSELUG00000021216	-	53	64.301	ENSMLUG00000009975	SRRT	93	56.000	Myotis_lucifugus
ENSELUG00000021216	-	96	56.784	ENSNGAG00000023715	Srrt	100	57.312	Nannospalax_galili
ENSELUG00000021216	-	53	67.521	ENSNBRG00000019100	srrt	92	59.075	Neolamprologus_brichardi
ENSELUG00000021216	-	52	57.962	ENSNLEG00000011987	SRRT	92	61.798	Nomascus_leucogenys
ENSELUG00000021216	-	94	47.271	ENSMEUG00000011941	SRRT	52	52.610	Notamacropus_eugenii
ENSELUG00000021216	-	63	63.043	ENSOPRG00000002502	-	67	61.314	Ochotona_princeps
ENSELUG00000021216	-	53	65.254	ENSODEG00000016856	SRRT	89	60.125	Octodon_degus
ENSELUG00000021216	-	53	68.017	ENSONIG00000004242	srrt	93	58.576	Oreochromis_niloticus
ENSELUG00000021216	-	93	67.417	ENSONIG00000016080	-	93	67.296	Oreochromis_niloticus
ENSELUG00000021216	-	96	59.931	ENSORLG00000008120	srrt	93	59.456	Oryzias_latipes
ENSELUG00000021216	-	96	59.587	ENSORLG00020003058	srrt	93	59.102	Oryzias_latipes_hni
ENSELUG00000021216	-	96	59.931	ENSORLG00015008062	srrt	93	59.338	Oryzias_latipes_hsok
ENSELUG00000021216	-	98	67.279	ENSOMEG00000006963	-	93	67.148	Oryzias_melastigma
ENSELUG00000021216	-	96	58.931	ENSOMEG00000003155	srrt	83	68.590	Oryzias_melastigma
ENSELUG00000021216	-	53	64.449	ENSOGAG00000017242	SRRT	93	56.184	Otolemur_garnettii
ENSELUG00000021216	-	53	64.301	ENSOARG00000015645	SRRT	93	55.189	Ovis_aries
ENSELUG00000021216	-	53	64.301	ENSPPAG00000041090	SRRT	93	55.595	Pan_paniscus
ENSELUG00000021216	-	53	64.718	ENSPPRG00000009557	SRRT	93	55.726	Panthera_pardus
ENSELUG00000021216	-	53	64.657	ENSPTIG00000014355	SRRT	93	55.713	Panthera_tigris_altaica
ENSELUG00000021216	-	53	64.301	ENSPTRG00000019511	SRRT	98	53.426	Pan_troglodytes
ENSELUG00000021216	-	53	63.395	ENSPANG00000020763	SRRT	94	55.193	Papio_anubis
ENSELUG00000021216	-	94	61.484	ENSPKIG00000022212	-	93	60.885	Paramormyrops_kingsleyae
ENSELUG00000021216	-	96	59.931	ENSPKIG00000005434	srrt	92	59.181	Paramormyrops_kingsleyae
ENSELUG00000021216	-	94	55.673	ENSPSIG00000016311	SRRT	93	56.954	Pelodiscus_sinensis
ENSELUG00000021216	-	96	56.647	ENSPMGG00000002841	srrt	92	56.563	Periophthalmus_magnuspinnatus
ENSELUG00000021216	-	53	65.042	ENSPEMG00000010834	Srrt	91	58.980	Peromyscus_maniculatus_bairdii
ENSELUG00000021216	-	96	51.197	ENSPMAG00000009614	-	93	46.479	Petromyzon_marinus
ENSELUG00000021216	-	53	62.940	ENSPCIG00000000816	SRRT	93	54.812	Phascolarctos_cinereus
ENSELUG00000021216	-	53	68.803	ENSPFOG00000005704	srrt	93	58.649	Poecilia_formosa
ENSELUG00000021216	-	93	63.702	ENSPFOG00000016554	-	93	63.582	Poecilia_formosa
ENSELUG00000021216	-	93	64.217	ENSPLAG00000004526	-	93	64.671	Poecilia_latipinna
ENSELUG00000021216	-	94	58.121	ENSPLAG00000021992	srrt	93	58.824	Poecilia_latipinna
ENSELUG00000021216	-	88	63.325	ENSPMEG00000001520	-	90	63.125	Poecilia_mexicana
ENSELUG00000021216	-	76	67.797	ENSPMEG00000001182	srrt	93	58.175	Poecilia_mexicana
ENSELUG00000021216	-	94	58.685	ENSPREG00000022308	srrt	93	58.886	Poecilia_reticulata
ENSELUG00000021216	-	53	62.168	ENSPCAG00000001621	SRRT	53	61.350	Procavia_capensis
ENSELUG00000021216	-	53	64.449	ENSPCOG00000025751	SRRT	93	55.713	Propithecus_coquereli
ENSELUG00000021216	-	61	62.500	ENSPVAG00000000834	SRRT	100	48.743	Pteropus_vampyrus
ENSELUG00000021216	-	53	68.017	ENSPNYG00000018710	srrt	93	59.176	Pundamilia_nyererei
ENSELUG00000021216	-	65	68.750	ENSPNAG00000010629	srrt	67	61.429	Pygocentrus_nattereri
ENSELUG00000021216	-	53	55.672	ENSRNOG00000048277	AABR07035787.1	92	55.042	Rattus_norvegicus
ENSELUG00000021216	-	53	64.449	ENSRBIG00000035718	SRRT	94	55.193	Rhinopithecus_bieti
ENSELUG00000021216	-	53	64.449	ENSRROG00000030622	SRRT	95	55.193	Rhinopithecus_roxellana
ENSELUG00000021216	-	53	64.449	ENSSBOG00000033570	SRRT	94	55.569	Saimiri_boliviensis_boliviensis
ENSELUG00000021216	-	55	61.538	ENSSHAG00000007349	-	74	62.474	Sarcophilus_harrisii
ENSELUG00000021216	-	53	70.940	ENSSFOG00015017293	srrt	92	61.827	Scleropages_formosus
ENSELUG00000021216	-	94	59.139	ENSSMAG00000015342	srrt	93	59.482	Scophthalmus_maximus
ENSELUG00000021216	-	94	59.112	ENSSDUG00000012049	srrt	92	59.574	Seriola_dumerili
ENSELUG00000021216	-	54	60.656	ENSSDUG00000002051	-	95	60.996	Seriola_dumerili
ENSELUG00000021216	-	94	57.751	ENSSLDG00000017477	srrt	84	66.258	Seriola_lalandi_dorsalis
ENSELUG00000021216	-	53	67.797	ENSSPAG00000005665	srrt	91	58.665	Stegastes_partitus
ENSELUG00000021216	-	86	66.582	ENSSPAG00000018943	-	96	64.490	Stegastes_partitus
ENSELUG00000021216	-	51	63.478	ENSSSCG00000024789	SRRT	98	53.491	Sus_scrofa
ENSELUG00000021216	-	96	57.829	ENSTRUG00000016075	srrt	93	57.833	Takifugu_rubripes
ENSELUG00000021216	-	89	65.000	ENSTRUG00000000023	-	89	64.115	Takifugu_rubripes
ENSELUG00000021216	-	74	53.431	ENSTNIG00000011779	srrt	73	65.369	Tetraodon_nigroviridis
ENSELUG00000021216	-	93	62.694	ENSTNIG00000003111	-	93	63.593	Tetraodon_nigroviridis
ENSELUG00000021216	-	53	64.449	ENSTTRG00000011104	SRRT	93	55.986	Tursiops_truncatus
ENSELUG00000021216	-	53	64.449	ENSUAMG00000027997	SRRT	95	55.699	Ursus_americanus
ENSELUG00000021216	-	53	64.449	ENSUMAG00000011295	SRRT	93	55.858	Ursus_maritimus
ENSELUG00000021216	-	96	56.314	ENSVVUG00000023572	SRRT	93	55.830	Vulpes_vulpes
ENSELUG00000021216	-	71	61.310	ENSXETG00000025124	srrt	73	59.592	Xenopus_tropicalis
ENSELUG00000021216	-	54	59.205	ENSXCOG00000013105	-	93	57.773	Xiphophorus_couchianus
ENSELUG00000021216	-	79	68.008	ENSXMAG00000007627	srrt	85	67.078	Xiphophorus_maculatus
ENSELUG00000021216	-	93	65.259	ENSXMAG00000002090	-	93	64.946	Xiphophorus_maculatus