EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000021417 (Gene tree)
Gene ID: 105022379
Gene Symbol: apex2
Alias: zgc:55889
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 4216 bases
Position: chrLG12:12246877-12251092
Accession: 105022379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000022461	Exo_endo_phos	PF03372.23	2.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000033421	-	3388	XM_010890701	ENSELUP00000022461	582 (aa)	XP_010889003	UPI000576A460

Gene Model

Click here to download ENSELUG00000021417's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000021417's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000021417	apex2	99	43.316	ENSG00000169188	APEX2	99	43.316	Homo_sapiens
ENSELUG00000021417	apex2	99	65.753	ENSAPOG00000005805	apex2	100	65.866	Acanthochromis_polyacanthus
ENSELUG00000021417	apex2	99	42.617	ENSAMEG00000003608	APEX2	99	42.617	Ailuropoda_melanoleuca
ENSELUG00000021417	apex2	99	64.444	ENSACIG00000010000	apex2	100	65.128	Amphilophus_citrinellus
ENSELUG00000021417	apex2	99	64.566	ENSAOCG00000021774	apex2	100	65.232	Amphiprion_ocellaris
ENSELUG00000021417	apex2	99	64.566	ENSAPEG00000020890	apex2	94	65.232	Amphiprion_percula
ENSELUG00000021417	apex2	99	64.626	ENSATEG00000023600	apex2	100	64.626	Anabas_testudineus
ENSELUG00000021417	apex2	99	45.704	ENSACAG00000011201	APEX2	99	45.876	Anolis_carolinensis
ENSELUG00000021417	apex2	99	44.332	ENSANAG00000021907	-	99	44.332	Aotus_nancymaae
ENSELUG00000021417	apex2	97	38.687	ENSANAG00000020845	-	99	38.356	Aotus_nancymaae
ENSELUG00000021417	apex2	99	60.714	ENSAMXG00000007422	apex2	100	60.980	Astyanax_mexicanus
ENSELUG00000021417	apex2	99	43.390	ENSBTAG00000013177	APEX2	99	43.390	Bos_taurus
ENSELUG00000021417	apex2	99	43.993	ENSCJAG00000016584	APEX2	99	43.993	Callithrix_jacchus
ENSELUG00000021417	apex2	99	42.185	ENSCAFG00000014310	APEX2	99	42.185	Canis_familiaris
ENSELUG00000021417	apex2	99	43.025	ENSCAFG00020013818	APEX2	99	57.741	Canis_lupus_dingo
ENSELUG00000021417	apex2	99	44.576	ENSCHIG00000019916	APEX2	99	44.915	Capra_hircus
ENSELUG00000021417	apex2	99	44.202	ENSTSYG00000005612	APEX2	99	44.202	Carlito_syrichta
ENSELUG00000021417	apex2	71	62.500	ENSCPOG00000007265	APEX2	80	62.500	Cavia_porcellus
ENSELUG00000021417	apex2	69	55.000	ENSCCAG00000025405	-	89	55.000	Cebus_capucinus
ENSELUG00000021417	apex2	99	43.316	ENSCATG00000044854	APEX2	99	43.316	Cercocebus_atys
ENSELUG00000021417	apex2	99	42.712	ENSCLAG00000017315	APEX2	99	42.881	Chinchilla_lanigera
ENSELUG00000021417	apex2	99	43.316	ENSCSAG00000012124	APEX2	99	43.316	Chlorocebus_sabaeus
ENSELUG00000021417	apex2	71	59.375	ENSCPBG00000016631	APEX2	99	44.103	Chrysemys_picta_bellii
ENSELUG00000021417	apex2	72	57.143	ENSCSAVG00000006052	-	89	57.143	Ciona_savignyi
ENSELUG00000021417	apex2	99	43.390	ENSCANG00000003053	APEX2	99	43.390	Colobus_angolensis_palliatus
ENSELUG00000021417	apex2	99	44.652	ENSCGRG00001008132	Apex2	99	44.482	Cricetulus_griseus_chok1gshd
ENSELUG00000021417	apex2	99	44.652	ENSCGRG00000009667	Apex2	86	62.736	Cricetulus_griseus_crigri
ENSELUG00000021417	apex2	99	63.746	ENSCSEG00000019900	apex2	99	63.746	Cynoglossus_semilaevis
ENSELUG00000021417	apex2	99	62.857	ENSCVAG00000021583	apex2	100	62.857	Cyprinodon_variegatus
ENSELUG00000021417	apex2	99	60.720	ENSDARG00000008472	apex2	100	60.720	Danio_rerio
ENSELUG00000021417	apex2	99	43.655	ENSDNOG00000038901	APEX2	99	43.655	Dasypus_novemcinctus
ENSELUG00000021417	apex2	70	66.129	ENSEBUG00000015654	apex2	84	66.129	Eptatretus_burgeri
ENSELUG00000021417	apex2	99	44.237	ENSEASG00005011694	APEX2	90	44.237	Equus_asinus_asinus
ENSELUG00000021417	apex2	99	44.237	ENSECAG00000026921	APEX2	90	44.237	Equus_caballus
ENSELUG00000021417	apex2	71	70.000	ENSEEUG00000013172	APEX2	80	70.000	Erinaceus_europaeus
ENSELUG00000021417	apex2	99	42.640	ENSFCAG00000021990	APEX2	99	42.640	Felis_catus
ENSELUG00000021417	apex2	99	42.034	ENSFDAG00000008076	APEX2	90	61.972	Fukomys_damarensis
ENSELUG00000021417	apex2	99	58.262	ENSFHEG00000021411	apex2	99	58.262	Fundulus_heteroclitus
ENSELUG00000021417	apex2	75	79.558	ENSGMOG00000019681	apex2	100	79.558	Gadus_morhua
ENSELUG00000021417	apex2	99	63.203	ENSGAFG00000005829	apex2	100	63.203	Gambusia_affinis
ENSELUG00000021417	apex2	66	85.227	ENSGACG00000012307	apex2	100	83.333	Gasterosteus_aculeatus
ENSELUG00000021417	apex2	90	42.831	ENSGAGG00000011520	APEX2	88	42.644	Gopherus_agassizii
ENSELUG00000021417	apex2	99	43.581	ENSGGOG00000002056	APEX2	99	43.581	Gorilla_gorilla
ENSELUG00000021417	apex2	99	62.607	ENSHBUG00000009938	apex2	100	63.167	Haplochromis_burtoni
ENSELUG00000021417	apex2	83	62.500	ENSHGLG00000000273	APEX2	96	62.500	Heterocephalus_glaber_female
ENSELUG00000021417	apex2	99	61.880	ENSHCOG00000010165	apex2	100	61.880	Hippocampus_comes
ENSELUG00000021417	apex2	99	58.541	ENSIPUG00000000352	APEX2	100	58.541	Ictalurus_punctatus
ENSELUG00000021417	apex2	99	42.542	ENSSTOG00000025121	APEX2	86	62.441	Ictidomys_tridecemlineatus
ENSELUG00000021417	apex2	71	65.000	ENSJJAG00000019611	Apex2	93	62.791	Jaculus_jaculus
ENSELUG00000021417	apex2	99	64.200	ENSKMAG00000006985	apex2	100	64.200	Kryptolebias_marmoratus
ENSELUG00000021417	apex2	99	65.983	ENSLBEG00000012139	apex2	100	65.983	Labrus_bergylta
ENSELUG00000021417	apex2	99	49.241	ENSLACG00000000865	APEX2	100	48.259	Latimeria_chalumnae
ENSELUG00000021417	apex2	99	59.418	ENSLOCG00000014467	apex2	100	60.204	Lepisosteus_oculatus
ENSELUG00000021417	apex2	99	43.147	ENSLAFG00000018312	APEX2	99	43.147	Loxodonta_africana
ENSELUG00000021417	apex2	99	43.824	ENSMFAG00000002486	APEX2	99	43.824	Macaca_fascicularis
ENSELUG00000021417	apex2	99	43.729	ENSMMUG00000008428	APEX2	99	43.729	Macaca_mulatta
ENSELUG00000021417	apex2	99	43.655	ENSMNEG00000036783	APEX2	99	43.655	Macaca_nemestrina
ENSELUG00000021417	apex2	99	43.316	ENSMLEG00000028208	APEX2	99	43.316	Mandrillus_leucophaeus
ENSELUG00000021417	apex2	99	63.776	ENSMAMG00000024220	apex2	100	63.776	Mastacembelus_armatus
ENSELUG00000021417	apex2	99	62.264	ENSMZEG00005026322	apex2	100	62.823	Maylandia_zebra
ENSELUG00000021417	apex2	99	42.470	ENSMICG00000043181	APEX2	99	42.470	Microcebus_murinus
ENSELUG00000021417	apex2	75	66.667	ENSMOCG00000004339	Apex2	88	61.792	Microtus_ochrogaster
ENSELUG00000021417	apex2	99	63.311	ENSMMOG00000017340	apex2	100	63.311	Mola_mola
ENSELUG00000021417	apex2	79	60.465	ENSMODG00000005341	APEX2	99	49.135	Monodelphis_domestica
ENSELUG00000021417	apex2	99	63.606	ENSMALG00000014179	apex2	100	63.439	Monopterus_albus
ENSELUG00000021417	apex2	99	42.954	MGP_CAROLIEiJ_G0033484	Apex2	100	53.004	Mus_caroli
ENSELUG00000021417	apex2	99	43.294	ENSMUSG00000025269	Apex2	99	53.004	Mus_musculus
ENSELUG00000021417	apex2	99	44.108	MGP_PahariEiJ_G0032023	Apex2	93	62.736	Mus_pahari
ENSELUG00000021417	apex2	99	43.973	MGP_SPRETEiJ_G0034654	Apex2	100	53.004	Mus_spretus
ENSELUG00000021417	apex2	99	44.108	ENSMPUG00000003293	APEX2	99	44.108	Mustela_putorius_furo
ENSELUG00000021417	apex2	99	42.930	ENSMLUG00000004562	-	99	42.930	Myotis_lucifugus
ENSELUG00000021417	apex2	99	42.517	ENSMLUG00000016298	-	99	42.517	Myotis_lucifugus
ENSELUG00000021417	apex2	99	43.051	ENSNGAG00000013576	Apex2	99	43.051	Nannospalax_galili
ENSELUG00000021417	apex2	99	62.436	ENSNBRG00000010099	apex2	100	62.651	Neolamprologus_brichardi
ENSELUG00000021417	apex2	56	60.000	ENSNLEG00000032067	-	79	60.000	Nomascus_leucogenys
ENSELUG00000021417	apex2	99	62.823	ENSONIG00000016881	apex2	100	63.339	Oreochromis_niloticus
ENSELUG00000021417	apex2	92	51.391	ENSOANG00000000689	-	95	51.577	Ornithorhynchus_anatinus
ENSELUG00000021417	apex2	99	39.232	ENSOCUG00000000570	APEX2	99	39.232	Oryctolagus_cuniculus
ENSELUG00000021417	apex2	99	61.630	ENSORLG00000014053	apex2	100	61.630	Oryzias_latipes
ENSELUG00000021417	apex2	99	61.329	ENSORLG00020013253	apex2	100	61.329	Oryzias_latipes_hni
ENSELUG00000021417	apex2	99	61.840	ENSORLG00015007515	apex2	100	61.840	Oryzias_latipes_hsok
ENSELUG00000021417	apex2	99	62.735	ENSOMEG00000003655	apex2	100	62.735	Oryzias_melastigma
ENSELUG00000021417	apex2	99	44.162	ENSOGAG00000007797	APEX2	99	44.162	Otolemur_garnettii
ENSELUG00000021417	apex2	99	44.576	ENSOARG00000005742	APEX2	99	44.746	Ovis_aries
ENSELUG00000021417	apex2	99	43.074	ENSPPAG00000035747	APEX2	99	42.905	Pan_paniscus
ENSELUG00000021417	apex2	99	42.640	ENSPPRG00000002440	APEX2	99	42.132	Panthera_pardus
ENSELUG00000021417	apex2	99	42.301	ENSPTIG00000021651	APEX2	99	41.794	Panthera_tigris_altaica
ENSELUG00000021417	apex2	99	43.243	ENSPTRG00000021946	APEX2	99	43.074	Pan_troglodytes
ENSELUG00000021417	apex2	99	43.316	ENSPANG00000003595	APEX2	99	43.316	Papio_anubis
ENSELUG00000021417	apex2	99	61.790	ENSPKIG00000007752	apex2	100	61.790	Paramormyrops_kingsleyae
ENSELUG00000021417	apex2	99	63.419	ENSPMGG00000009151	apex2	100	63.419	Periophthalmus_magnuspinnatus
ENSELUG00000021417	apex2	99	44.237	ENSPEMG00000016475	Apex2	89	59.817	Peromyscus_maniculatus_bairdii
ENSELUG00000021417	apex2	85	71.429	ENSPCIG00000007633	APEX2	98	47.578	Phascolarctos_cinereus
ENSELUG00000021417	apex2	99	63.543	ENSPFOG00000000408	apex2	100	63.714	Poecilia_formosa
ENSELUG00000021417	apex2	99	63.543	ENSPLAG00000023814	apex2	100	63.714	Poecilia_latipinna
ENSELUG00000021417	apex2	99	63.714	ENSPMEG00000023222	apex2	100	63.884	Poecilia_mexicana
ENSELUG00000021417	apex2	99	43.316	ENSPPYG00000020388	APEX2	99	43.316	Pongo_abelii
ENSELUG00000021417	apex2	99	44.162	ENSPCOG00000016083	APEX2	99	44.162	Propithecus_coquereli
ENSELUG00000021417	apex2	92	43.309	ENSPVAG00000007851	APEX2	99	43.309	Pteropus_vampyrus
ENSELUG00000021417	apex2	99	62.436	ENSPNYG00000015698	apex2	100	62.995	Pundamilia_nyererei
ENSELUG00000021417	apex2	99	60.269	ENSPNAG00000011666	apex2	100	60.269	Pygocentrus_nattereri
ENSELUG00000021417	apex2	99	43.266	ENSRNOG00000000166	Apex2	99	43.266	Rattus_norvegicus
ENSELUG00000021417	apex2	99	43.559	ENSRBIG00000036500	APEX2	99	43.559	Rhinopithecus_bieti
ENSELUG00000021417	apex2	99	43.486	ENSRROG00000032674	APEX2	99	43.486	Rhinopithecus_roxellana
ENSELUG00000021417	apex2	99	43.898	ENSSBOG00000030500	-	99	44.237	Saimiri_boliviensis_boliviensis
ENSELUG00000021417	apex2	96	35.409	ENSSBOG00000003489	-	96	35.409	Saimiri_boliviensis_boliviensis
ENSELUG00000021417	apex2	99	50.173	ENSSHAG00000007846	APEX2	99	49.827	Sarcophilus_harrisii
ENSELUG00000021417	apex2	84	81.818	ENSSFOG00015010354	apex2	100	62.995	Scleropages_formosus
ENSELUG00000021417	apex2	99	65.188	ENSSMAG00000012753	apex2	100	65.188	Scophthalmus_maximus
ENSELUG00000021417	apex2	99	67.235	ENSSDUG00000022892	apex2	100	67.406	Seriola_dumerili
ENSELUG00000021417	apex2	99	66.384	ENSSLDG00000024347	apex2	100	66.384	Seriola_lalandi_dorsalis
ENSELUG00000021417	apex2	99	44.932	ENSSARG00000010297	APEX2	99	44.932	Sorex_araneus
ENSELUG00000021417	apex2	99	64.888	ENSSPAG00000016279	apex2	100	65.404	Stegastes_partitus
ENSELUG00000021417	apex2	99	43.486	ENSSSCG00000012348	-	99	43.486	Sus_scrofa
ENSELUG00000021417	apex2	99	62.564	ENSTRUG00000015660	apex2	100	62.735	Takifugu_rubripes
ENSELUG00000021417	apex2	85	59.200	ENSTNIG00000003725	apex2	100	59.055	Tetraodon_nigroviridis
ENSELUG00000021417	apex2	92	44.052	ENSTBEG00000010520	APEX2	99	44.052	Tupaia_belangeri
ENSELUG00000021417	apex2	99	41.849	ENSUAMG00000004720	APEX2	99	57.741	Ursus_americanus
ENSELUG00000021417	apex2	71	63.333	ENSUMAG00000002892	APEX2	99	40.404	Ursus_maritimus
ENSELUG00000021417	apex2	99	42.689	ENSVVUG00000005989	APEX2	99	42.689	Vulpes_vulpes
ENSELUG00000021417	apex2	99	47.924	ENSXETG00000022026	apex2	98	47.924	Xenopus_tropicalis
ENSELUG00000021417	apex2	99	62.862	ENSXMAG00000025740	apex2	100	63.203	Xiphophorus_maculatus