EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSELUG00000021459 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC105025854
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 56072 bases
Position: chrLG10:6211431-6267502
Accession: 105025854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000040825	zf-C2H2	PF00096.26	2e-41	1	6
ENSELUP00000040825	zf-C2H2	PF00096.26	2e-41	2	6
ENSELUP00000040825	zf-C2H2	PF00096.26	2e-41	3	6
ENSELUP00000040825	zf-C2H2	PF00096.26	2e-41	4	6
ENSELUP00000040825	zf-C2H2	PF00096.26	2e-41	5	6
ENSELUP00000040825	zf-C2H2	PF00096.26	2e-41	6	6
ENSELUP00000040825	zf-met	PF12874.7	1.6e-11	1	2
ENSELUP00000040825	zf-met	PF12874.7	1.6e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000033452	-	6522	XM_010896862	ENSELUP00000022492	1091 (aa)	XP_010895164	-
ENSELUT00000033472	-	6522	-	ENSELUP00000022504	1091 (aa)	-	-
ENSELUT00000033411	-	2295	-	ENSELUP00000040825	764 (aa)	-	-

Gene Model

Click here to download ENSELUG00000021459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000021459's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000021459	-	51	41.434	ENSELUG00000021499	-	95	41.434
ENSELUG00000021459	-	54	42.500	ENSELUG00000021355	-	97	41.353
ENSELUG00000021459	-	52	40.933	ENSELUG00000022942	-	61	44.444
ENSELUG00000021459	-	51	35.979	ENSELUG00000008148	-	89	35.979
ENSELUG00000021459	-	52	39.662	ENSELUG00000012931	-	84	39.662
ENSELUG00000021459	-	54	39.918	ENSELUG00000013245	-	95	39.918
ENSELUG00000021459	-	50	43.125	ENSELUG00000013348	-	88	43.125
ENSELUG00000021459	-	51	34.934	ENSELUG00000016397	-	56	35.521
ENSELUG00000021459	-	54	44.843	ENSELUG00000019008	-	95	45.000
ENSELUG00000021459	-	50	36.076	ENSELUG00000021287	-	84	36.076
ENSELUG00000021459	-	54	35.193	ENSELUG00000002844	-	59	35.021
ENSELUG00000021459	-	55	40.392	ENSELUG00000018970	-	99	40.149
ENSELUG00000021459	-	52	40.571	ENSELUG00000021525	-	76	40.571
ENSELUG00000021459	-	92	82.267	ENSELUG00000021381	-	89	82.267