EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000021534 (Gene tree)
Gene ID: 105027249
Gene Symbol: smpd2b
Alias: zmp:0000000637
Full Name: sphingomyelin phosphodiesterase 2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 15848 bases
Position: chrLG17:33579376-33595223
Accession: 105027249
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000040886	Exo_endo_phos	PF03372.23	1.4e-16	1	1
ENSELUP00000022563	Exo_endo_phos	PF03372.23	4e-16	1	1
ENSELUP00000022550	Exo_endo_phos	PF03372.23	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000033538	-	1305	-	ENSELUP00000022550	434 (aa)	-	-
ENSELUT00000033553	-	1831	-	ENSELUP00000022563	480 (aa)	-	-
ENSELUT00000033550	-	1717	XM_010899250	ENSELUP00000040886	442 (aa)	XP_010897552	UPI0005762E01

Gene Model

Click here to download ENSELUG00000021534's gene model file

Pathways

Pathway ID	Pathway Name	Source
els00600	Sphingolipid metabolism	KEGG
els01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000021534's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000021534	smpd2b	95	43.128	ENSG00000135587	SMPD2	96	44.076	Homo_sapiens
ENSELUG00000021534	smpd2b	98	44.009	ENSAMEG00000016431	SMPD2	98	44.931	Ailuropoda_melanoleuca
ENSELUG00000021534	smpd2b	99	73.744	ENSACIG00000010069	smpd2b	99	76.066	Amphilophus_citrinellus
ENSELUG00000021534	smpd2b	100	73.815	ENSAOCG00000014544	smpd2b	100	73.815	Amphiprion_ocellaris
ENSELUG00000021534	smpd2b	100	74.041	ENSAPEG00000023764	smpd2b	100	74.041	Amphiprion_percula
ENSELUG00000021534	smpd2b	100	73.138	ENSATEG00000025113	smpd2b	100	73.138	Anabas_testudineus
ENSELUG00000021534	smpd2b	90	52.645	ENSACAG00000009270	SMPD2	99	52.099	Anolis_carolinensis
ENSELUG00000021534	smpd2b	95	43.365	ENSANAG00000028732	SMPD2	97	43.839	Aotus_nancymaae
ENSELUG00000021534	smpd2b	100	74.266	ENSACLG00000022892	smpd2b	100	74.266	Astatotilapia_calliptera
ENSELUG00000021534	smpd2b	92	70.833	ENSAMXG00000013614	smpd2b	94	70.833	Astyanax_mexicanus
ENSELUG00000021534	smpd2b	95	44.076	ENSBTAG00000008145	SMPD2	67	44.076	Bos_taurus
ENSELUG00000021534	smpd2b	90	35.749	WBGene00012105	T27F6.6	67	42.612	Caenorhabditis_elegans
ENSELUG00000021534	smpd2b	95	43.365	ENSCJAG00000005756	SMPD2	97	43.839	Callithrix_jacchus
ENSELUG00000021534	smpd2b	93	44.660	ENSCAFG00000003816	SMPD2	94	45.631	Canis_familiaris
ENSELUG00000021534	smpd2b	95	44.076	ENSCHIG00000022563	SMPD2	96	44.076	Capra_hircus
ENSELUG00000021534	smpd2b	73	50.774	ENSTSYG00000008525	SMPD2	94	45.411	Carlito_syrichta
ENSELUG00000021534	smpd2b	79	42.234	ENSCAPG00000008057	SMPD2	95	44.602	Cavia_aperea
ENSELUG00000021534	smpd2b	96	40.084	ENSCPOG00000003102	SMPD2	96	45.540	Cavia_porcellus
ENSELUG00000021534	smpd2b	95	43.839	ENSCCAG00000036357	SMPD2	97	44.076	Cebus_capucinus
ENSELUG00000021534	smpd2b	95	44.681	ENSCATG00000015266	SMPD2	96	45.154	Cercocebus_atys
ENSELUG00000021534	smpd2b	63	54.874	ENSCLAG00000009948	SMPD2	60	54.874	Chinchilla_lanigera
ENSELUG00000021534	smpd2b	95	44.681	ENSCSAG00000015322	SMPD2	96	44.917	Chlorocebus_sabaeus
ENSELUG00000021534	smpd2b	92	57.317	ENSCPBG00000017837	SMPD2	99	56.901	Chrysemys_picta_bellii
ENSELUG00000021534	smpd2b	95	44.076	ENSCANG00000029491	SMPD2	96	44.313	Colobus_angolensis_palliatus
ENSELUG00000021534	smpd2b	91	45.610	ENSCGRG00001019999	Smpd2	93	45.610	Cricetulus_griseus_chok1gshd
ENSELUG00000021534	smpd2b	91	45.610	ENSCGRG00000008928	Smpd2	93	45.610	Cricetulus_griseus_crigri
ENSELUG00000021534	smpd2b	97	76.047	ENSCSEG00000016030	smpd2b	97	76.047	Cynoglossus_semilaevis
ENSELUG00000021534	smpd2b	100	72.686	ENSCVAG00000020815	smpd2b	100	72.686	Cyprinodon_variegatus
ENSELUG00000021534	smpd2b	98	67.749	ENSDARG00000052701	smpd2b	98	67.749	Danio_rerio
ENSELUG00000021534	smpd2b	94	60.192	ENSDARG00000040523	smpd2a	100	57.336	Danio_rerio
ENSELUG00000021534	smpd2b	73	50.621	ENSDNOG00000003948	SMPD2	75	50.621	Dasypus_novemcinctus
ENSELUG00000021534	smpd2b	73	50.621	ENSDORG00000006485	Smpd2	93	44.118	Dipodomys_ordii
ENSELUG00000021534	smpd2b	64	36.332	FBgn0035421	CG12034	65	36.027	Drosophila_melanogaster
ENSELUG00000021534	smpd2b	91	46.988	ENSEBUG00000002962	smpd2b	95	48.193	Eptatretus_burgeri
ENSELUG00000021534	smpd2b	96	44.601	ENSEASG00005006484	SMPD2	97	44.444	Equus_asinus_asinus
ENSELUG00000021534	smpd2b	73	51.553	ENSECAG00000016972	SMPD2	97	44.444	Equus_caballus
ENSELUG00000021534	smpd2b	93	44.660	ENSFCAG00000006358	SMPD2	94	45.631	Felis_catus
ENSELUG00000021534	smpd2b	93	56.416	ENSFALG00000003639	SMPD2	99	56.416	Ficedula_albicollis
ENSELUG00000021534	smpd2b	100	74.492	ENSFHEG00000017395	smpd2b	100	74.492	Fundulus_heteroclitus
ENSELUG00000021534	smpd2b	97	66.121	ENSGMOG00000015239	smpd2b	98	66.121	Gadus_morhua
ENSELUG00000021534	smpd2b	93	52.542	ENSGALG00000033245	SMPD2	99	53.140	Gallus_gallus
ENSELUG00000021534	smpd2b	100	74.041	ENSGAFG00000016345	smpd2b	100	74.041	Gambusia_affinis
ENSELUG00000021534	smpd2b	95	73.223	ENSGACG00000005132	smpd2b	97	73.223	Gasterosteus_aculeatus
ENSELUG00000021534	smpd2b	92	58.088	ENSGAGG00000023942	SMPD2	99	57.664	Gopherus_agassizii
ENSELUG00000021534	smpd2b	95	43.602	ENSGGOG00000003394	SMPD2	96	44.313	Gorilla_gorilla
ENSELUG00000021534	smpd2b	76	47.024	ENSHGLG00000000226	SMPD2	78	47.024	Heterocephalus_glaber_female
ENSELUG00000021534	smpd2b	76	47.024	ENSHGLG00100016698	SMPD2	78	47.024	Heterocephalus_glaber_male
ENSELUG00000021534	smpd2b	95	71.090	ENSHCOG00000001358	smpd2b	97	71.090	Hippocampus_comes
ENSELUG00000021534	smpd2b	97	50.117	ENSIPUG00000017284	smpd2a	98	47.733	Ictalurus_punctatus
ENSELUG00000021534	smpd2b	99	70.413	ENSIPUG00000024794	smpd2b	99	70.413	Ictalurus_punctatus
ENSELUG00000021534	smpd2b	94	40.133	ENSSTOG00000028661	SMPD2	95	45.411	Ictidomys_tridecemlineatus
ENSELUG00000021534	smpd2b	93	44.068	ENSJJAG00000019368	Smpd2	95	44.068	Jaculus_jaculus
ENSELUG00000021534	smpd2b	100	73.363	ENSKMAG00000015753	smpd2b	100	73.363	Kryptolebias_marmoratus
ENSELUG00000021534	smpd2b	99	72.936	ENSLBEG00000024878	smpd2b	99	72.936	Labrus_bergylta
ENSELUG00000021534	smpd2b	92	60.591	ENSLACG00000016351	smpd2b	97	60.591	Latimeria_chalumnae
ENSELUG00000021534	smpd2b	94	71.531	ENSLOCG00000009741	smpd2b	96	71.531	Lepisosteus_oculatus
ENSELUG00000021534	smpd2b	98	41.761	ENSLAFG00000003298	SMPD2	99	41.379	Loxodonta_africana
ENSELUG00000021534	smpd2b	95	44.681	ENSMFAG00000033236	SMPD2	96	44.917	Macaca_fascicularis
ENSELUG00000021534	smpd2b	95	44.681	ENSMNEG00000042401	SMPD2	96	44.917	Macaca_nemestrina
ENSELUG00000021534	smpd2b	84	43.583	ENSMLEG00000039457	SMPD2	96	44.118	Mandrillus_leucophaeus
ENSELUG00000021534	smpd2b	100	74.266	ENSMAMG00000004710	smpd2b	100	74.266	Mastacembelus_armatus
ENSELUG00000021534	smpd2b	100	74.266	ENSMZEG00005002958	smpd2b	100	74.266	Maylandia_zebra
ENSELUG00000021534	smpd2b	93	52.899	ENSMGAG00000006821	SMPD2	99	53.976	Meleagris_gallopavo
ENSELUG00000021534	smpd2b	76	49.107	ENSMAUG00000008721	Smpd2	93	45.209	Mesocricetus_auratus
ENSELUG00000021534	smpd2b	96	45.070	ENSMICG00000014442	SMPD2	97	46.136	Microcebus_murinus
ENSELUG00000021534	smpd2b	90	46.212	ENSMOCG00000019666	Smpd2	92	46.212	Microtus_ochrogaster
ENSELUG00000021534	smpd2b	93	74.818	ENSMMOG00000012679	smpd2b	94	74.818	Mola_mola
ENSELUG00000021534	smpd2b	92	44.313	ENSMODG00000017971	SMPD2	93	43.839	Monodelphis_domestica
ENSELUG00000021534	smpd2b	100	73.874	ENSMALG00000000267	smpd2b	99	75.952	Monopterus_albus
ENSELUG00000021534	smpd2b	90	43.890	MGP_CAROLIEiJ_G0015268	Smpd2	92	44.389	Mus_caroli
ENSELUG00000021534	smpd2b	90	44.221	ENSMUSG00000019822	Smpd2	92	43.970	Mus_musculus
ENSELUG00000021534	smpd2b	94	42.548	MGP_PahariEiJ_G0030686	Smpd2	92	44.221	Mus_pahari
ENSELUG00000021534	smpd2b	90	44.472	MGP_SPRETEiJ_G0016077	Smpd2	92	44.975	Mus_spretus
ENSELUG00000021534	smpd2b	95	44.313	ENSMPUG00000010005	SMPD2	96	45.261	Mustela_putorius_furo
ENSELUG00000021534	smpd2b	96	45.540	ENSMLUG00000003793	SMPD2	97	45.305	Myotis_lucifugus
ENSELUG00000021534	smpd2b	56	56.557	ENSNGAG00000013670	Smpd2	93	56.557	Nannospalax_galili
ENSELUG00000021534	smpd2b	97	74.299	ENSNBRG00000008403	smpd2b	99	74.246	Neolamprologus_brichardi
ENSELUG00000021534	smpd2b	95	43.602	ENSNLEG00000012570	SMPD2	96	44.787	Nomascus_leucogenys
ENSELUG00000021534	smpd2b	93	41.304	ENSMEUG00000004602	SMPD2	94	41.304	Notamacropus_eugenii
ENSELUG00000021534	smpd2b	93	42.718	ENSOPRG00000012612	SMPD2	94	42.961	Ochotona_princeps
ENSELUG00000021534	smpd2b	100	74.041	ENSONIG00000014702	smpd2b	100	74.041	Oreochromis_niloticus
ENSELUG00000021534	smpd2b	93	45.631	ENSOCUG00000008607	SMPD2	94	45.874	Oryctolagus_cuniculus
ENSELUG00000021534	smpd2b	100	72.686	ENSORLG00000006334	smpd2b	100	72.686	Oryzias_latipes
ENSELUG00000021534	smpd2b	100	72.912	ENSORLG00020015231	smpd2b	100	72.912	Oryzias_latipes_hni
ENSELUG00000021534	smpd2b	100	72.460	ENSORLG00015010424	smpd2b	100	72.460	Oryzias_latipes_hsok
ENSELUG00000021534	smpd2b	100	73.363	ENSOMEG00000016121	smpd2b	100	73.363	Oryzias_melastigma
ENSELUG00000021534	smpd2b	93	45.631	ENSOGAG00000015505	SMPD2	94	44.903	Otolemur_garnettii
ENSELUG00000021534	smpd2b	93	41.587	ENSOARG00000010409	SMPD2	94	41.587	Ovis_aries
ENSELUG00000021534	smpd2b	95	43.365	ENSPPAG00000031363	SMPD2	96	44.313	Pan_paniscus
ENSELUG00000021534	smpd2b	73	50.311	ENSPPRG00000000099	SMPD2	94	44.175	Panthera_pardus
ENSELUG00000021534	smpd2b	93	43.689	ENSPTIG00000008954	SMPD2	94	44.660	Panthera_tigris_altaica
ENSELUG00000021534	smpd2b	95	43.365	ENSPTRG00000018484	SMPD2	96	44.313	Pan_troglodytes
ENSELUG00000021534	smpd2b	95	44.681	ENSPANG00000024480	SMPD2	96	44.917	Papio_anubis
ENSELUG00000021534	smpd2b	96	70.023	ENSPKIG00000011322	smpd2a	92	69.953	Paramormyrops_kingsleyae
ENSELUG00000021534	smpd2b	90	76.692	ENSPMGG00000000230	smpd2b	95	76.190	Periophthalmus_magnuspinnatus
ENSELUG00000021534	smpd2b	76	50.000	ENSPEMG00000018109	Smpd2	98	45.305	Peromyscus_maniculatus_bairdii
ENSELUG00000021534	smpd2b	74	51.672	ENSPMAG00000002460	smpd2b	94	51.351	Petromyzon_marinus
ENSELUG00000021534	smpd2b	92	44.444	ENSPCIG00000005984	SMPD2	97	41.492	Phascolarctos_cinereus
ENSELUG00000021534	smpd2b	100	74.266	ENSPFOG00000014164	smpd2b	100	74.266	Poecilia_formosa
ENSELUG00000021534	smpd2b	100	74.266	ENSPLAG00000014950	smpd2b	100	74.266	Poecilia_latipinna
ENSELUG00000021534	smpd2b	100	74.266	ENSPMEG00000002286	smpd2b	100	74.266	Poecilia_mexicana
ENSELUG00000021534	smpd2b	100	74.718	ENSPREG00000012181	smpd2b	100	74.718	Poecilia_reticulata
ENSELUG00000021534	smpd2b	95	43.365	ENSPPYG00000016908	-	71	43.839	Pongo_abelii
ENSELUG00000021534	smpd2b	73	50.311	ENSPCAG00000011808	SMPD2	76	50.311	Procavia_capensis
ENSELUG00000021534	smpd2b	76	50.298	ENSPCOG00000001714	SMPD2	97	44.836	Propithecus_coquereli
ENSELUG00000021534	smpd2b	95	44.787	ENSPVAG00000006556	SMPD2	96	44.000	Pteropus_vampyrus
ENSELUG00000021534	smpd2b	100	73.874	ENSPNYG00000005567	smpd2b	100	73.874	Pundamilia_nyererei
ENSELUG00000021534	smpd2b	99	70.642	ENSPNAG00000007986	smpd2b	99	70.642	Pygocentrus_nattereri
ENSELUG00000021534	smpd2b	97	43.387	ENSRNOG00000000306	Smpd2	98	43.387	Rattus_norvegicus
ENSELUG00000021534	smpd2b	95	44.313	ENSRBIG00000033388	SMPD2	96	44.550	Rhinopithecus_bieti
ENSELUG00000021534	smpd2b	95	44.313	ENSRROG00000037705	SMPD2	96	44.550	Rhinopithecus_roxellana
ENSELUG00000021534	smpd2b	95	44.313	ENSSBOG00000033929	SMPD2	97	44.550	Saimiri_boliviensis_boliviensis
ENSELUG00000021534	smpd2b	100	70.814	ENSSFOG00015022890	smpd2	100	70.814	Scleropages_formosus
ENSELUG00000021534	smpd2b	100	74.944	ENSSMAG00000008963	smpd2b	100	74.944	Scophthalmus_maximus
ENSELUG00000021534	smpd2b	100	73.874	ENSSDUG00000000098	smpd2b	100	73.874	Seriola_dumerili
ENSELUG00000021534	smpd2b	100	73.649	ENSSLDG00000009497	smpd2b	100	73.649	Seriola_lalandi_dorsalis
ENSELUG00000021534	smpd2b	95	43.972	ENSSARG00000006192	SMPD2	96	44.076	Sorex_araneus
ENSELUG00000021534	smpd2b	94	56.522	ENSSPUG00000013852	SMPD2	99	56.522	Sphenodon_punctatus
ENSELUG00000021534	smpd2b	100	75.621	ENSSPAG00000001844	smpd2b	100	75.621	Stegastes_partitus
ENSELUG00000021534	smpd2b	94	43.230	ENSSSCG00000004408	SMPD2	95	44.471	Sus_scrofa
ENSELUG00000021534	smpd2b	93	54.237	ENSTGUG00000001713	SMPD2	99	54.237	Taeniopygia_guttata
ENSELUG00000021534	smpd2b	95	75.120	ENSTRUG00000025701	smpd2b	96	75.120	Takifugu_rubripes
ENSELUG00000021534	smpd2b	93	74.453	ENSTNIG00000018297	smpd2b	100	74.453	Tetraodon_nigroviridis
ENSELUG00000021534	smpd2b	73	50.932	ENSTBEG00000009336	SMPD2	75	50.932	Tupaia_belangeri
ENSELUG00000021534	smpd2b	93	41.990	ENSTTRG00000004183	SMPD2	94	42.476	Tursiops_truncatus
ENSELUG00000021534	smpd2b	98	44.009	ENSUAMG00000018011	SMPD2	98	44.931	Ursus_americanus
ENSELUG00000021534	smpd2b	88	42.674	ENSUMAG00000025505	SMPD2	91	43.782	Ursus_maritimus
ENSELUG00000021534	smpd2b	81	45.983	ENSXETG00000000421	smpd2	99	44.472	Xenopus_tropicalis
ENSELUG00000021534	smpd2b	96	72.471	ENSXCOG00000015987	smpd2b	99	72.471	Xiphophorus_couchianus
ENSELUG00000021534	smpd2b	100	73.138	ENSXMAG00000018088	smpd2b	100	73.138	Xiphophorus_maculatus