EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000021650 (Gene tree)
Gene ID: 105010736
Gene Symbol: pprc1
Alias: cb478|sb:cb478|wu:fb72d09|wu:fj86g08
Full Name: peroxisome proliferator-activated receptor gamma%2C coactivator-related 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 16026 bases
Position: chrLG06:339461-355486
Accession: 105010736
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000022724	RRM_1	PF00076.22	1e-06	1	1
ENSELUP00000022746	RRM_1	PF00076.22	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000042396	-	5559	XM_010870290	ENSELUP00000022746	1389 (aa)	XP_010868592	UPI0005761F79
ENSELUT00000042393	-	5669	-	ENSELUP00000022724	1183 (aa)	-	-

Gene Model

Click here to download ENSELUG00000021650's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000021650's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000021650	pprc1	63	74.375	ENSACIG00000022532	pprc1	86	79.861	Amphilophus_citrinellus
ENSELUG00000021650	pprc1	52	33.704	ENSLBEG00000024075	-	51	46.032	Labrus_bergylta
ENSELUG00000021650	pprc1	82	41.898	ENSMALG00000016857	pprc1	82	41.528	Monopterus_albus
ENSELUG00000021650	pprc1	100	45.816	ENSPLAG00000010056	pprc1	82	41.541	Poecilia_latipinna
ENSELUG00000021650	pprc1	64	83.065	ENSPREG00000020657	pprc1	66	77.551	Poecilia_reticulata
ENSELUG00000021650	pprc1	61	67.442	ENSSMAG00000005915	si:dkey-93h22.8	72	62.238	Scophthalmus_maximus