EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000021651 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-271b14.1
Alias: si:ch211-271b14.1|zgc:152816
Full Name: matrin-3
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 28494 bases
Position: chrLG07:7814430-7842923
Accession: 105010870
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000022624	zf-met	PF12874.7	0.00051	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000042374	-	2842	-	ENSELUP00000022680	691 (aa)	-	-
ENSELUT00000042397	-	981	-	ENSELUP00000040989	326 (aa)	-	-
ENSELUT00000033630	-	2391	-	ENSELUP00000022624	796 (aa)	-	-
ENSELUT00000033680	-	2158	-	ENSELUP00000022657	463 (aa)	-	-
ENSELUT00000033609	-	1998	XM_010870527	ENSELUP00000040921	665 (aa)	XP_010868829	-
ENSELUT00000033650	-	1815	-	ENSELUP00000040933	595 (aa)	-	-

Gene Model

Click here to download ENSELUG00000021651's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000021651's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000021651	si:ch211-271b14.1	80	50.980	ENSELUG00000021848	matr3l1.1	84	45.946

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000021651	si:ch211-271b14.1	86	41.748	ENSG00000015479	MATR3	76	41.748	Homo_sapiens
ENSELUG00000021651	si:ch211-271b14.1	95	42.718	ENSAMEG00000011347	-	81	42.718	Ailuropoda_melanoleuca
ENSELUG00000021651	si:ch211-271b14.1	94	46.535	ENSAPLG00000008118	-	81	46.535	Anas_platyrhynchos
ENSELUG00000021651	si:ch211-271b14.1	90	54.286	ENSACAG00000016233	-	73	50.667	Anolis_carolinensis
ENSELUG00000021651	si:ch211-271b14.1	95	44.118	ENSANAG00000022951	-	81	44.118	Aotus_nancymaae
ENSELUG00000021651	si:ch211-271b14.1	89	41.975	ENSAMXG00000010681	matr3l1.1	89	41.975	Astyanax_mexicanus
ENSELUG00000021651	si:ch211-271b14.1	84	64.444	ENSAMXG00000010685	matr3l1.1	72	64.444	Astyanax_mexicanus
ENSELUG00000021651	si:ch211-271b14.1	81	32.117	ENSBTAG00000006756	MATR3	75	32.117	Bos_taurus
ENSELUG00000021651	si:ch211-271b14.1	86	42.718	ENSCJAG00000006888	-	82	42.718	Callithrix_jacchus
ENSELUG00000021651	si:ch211-271b14.1	96	42.718	ENSCAFG00000001345	MATR3	86	42.718	Canis_familiaris
ENSELUG00000021651	si:ch211-271b14.1	96	44.118	ENSCAFG00020010504	-	86	44.118	Canis_lupus_dingo
ENSELUG00000021651	si:ch211-271b14.1	86	42.718	ENSCHIG00000025746	-	76	42.718	Capra_hircus
ENSELUG00000021651	si:ch211-271b14.1	86	42.718	ENSTSYG00000011028	-	76	42.718	Carlito_syrichta
ENSELUG00000021651	si:ch211-271b14.1	86	42.718	ENSCPOG00000014076	-	77	42.718	Cavia_porcellus
ENSELUG00000021651	si:ch211-271b14.1	86	42.718	ENSCCAG00000025074	-	74	42.718	Cebus_capucinus
ENSELUG00000021651	si:ch211-271b14.1	64	42.718	ENSCATG00000041304	-	65	42.718	Cercocebus_atys
ENSELUG00000021651	si:ch211-271b14.1	86	42.718	ENSCLAG00000015998	-	78	42.718	Chinchilla_lanigera
ENSELUG00000021651	si:ch211-271b14.1	86	41.748	ENSCSAG00000013075	-	76	41.748	Chlorocebus_sabaeus
ENSELUG00000021651	si:ch211-271b14.1	90	56.061	ENSCPBG00000006303	-	78	56.061	Chrysemys_picta_bellii
ENSELUG00000021651	si:ch211-271b14.1	95	42.718	ENSCANG00000028224	-	82	42.718	Colobus_angolensis_palliatus
ENSELUG00000021651	si:ch211-271b14.1	79	52.239	ENSCGRG00001020227	Matr3	72	53.030	Cricetulus_griseus_chok1gshd
ENSELUG00000021651	si:ch211-271b14.1	79	52.239	ENSCGRG00000011298	Matr3	72	53.030	Cricetulus_griseus_crigri
ENSELUG00000021651	si:ch211-271b14.1	87	53.333	ENSCSEG00000012682	matr3l1.1	77	53.333	Cynoglossus_semilaevis
ENSELUG00000021651	si:ch211-271b14.1	94	32.381	ENSCVAG00000005337	matr3l1.1	91	30.909	Cyprinodon_variegatus
ENSELUG00000021651	si:ch211-271b14.1	86	42.718	ENSDNOG00000037723	-	71	42.718	Dasypus_novemcinctus
ENSELUG00000021651	si:ch211-271b14.1	88	42.241	ENSEASG00005020857	-	76	42.718	Equus_asinus_asinus
ENSELUG00000021651	si:ch211-271b14.1	83	42.718	ENSECAG00000012882	MATR3	76	42.718	Equus_caballus
ENSELUG00000021651	si:ch211-271b14.1	83	42.718	ENSFCAG00000021911	-	76	42.718	Felis_catus
ENSELUG00000021651	si:ch211-271b14.1	95	40.800	ENSFALG00000003071	-	84	40.800	Ficedula_albicollis
ENSELUG00000021651	si:ch211-271b14.1	86	42.718	ENSFDAG00000017675	-	76	42.718	Fukomys_damarensis
ENSELUG00000021651	si:ch211-271b14.1	96	38.793	ENSGALG00000002478	MATR3	84	38.462	Gallus_gallus
ENSELUG00000021651	si:ch211-271b14.1	90	56.061	ENSGAGG00000011386	-	78	56.061	Gopherus_agassizii
ENSELUG00000021651	si:ch211-271b14.1	95	42.718	ENSGGOG00000007308	-	82	42.718	Gorilla_gorilla
ENSELUG00000021651	si:ch211-271b14.1	86	42.718	ENSHGLG00000004673	MATR3	77	42.718	Heterocephalus_glaber_female
ENSELUG00000021651	si:ch211-271b14.1	64	42.718	ENSHGLG00100006442	-	72	42.718	Heterocephalus_glaber_male
ENSELUG00000021651	si:ch211-271b14.1	87	41.667	ENSHCOG00000013223	matr3l1.1	77	48.485	Hippocampus_comes
ENSELUG00000021651	si:ch211-271b14.1	76	54.435	ENSIPUG00000020686	MATR3	97	54.435	Ictalurus_punctatus
ENSELUG00000021651	si:ch211-271b14.1	83	43.689	ENSSTOG00000014746	-	76	43.689	Ictidomys_tridecemlineatus
ENSELUG00000021651	si:ch211-271b14.1	86	37.288	ENSJJAG00000021710	-	76	37.288	Jaculus_jaculus
ENSELUG00000021651	si:ch211-271b14.1	64	49.020	ENSLBEG00000018267	matr3l1.1	81	49.020	Labrus_bergylta
ENSELUG00000021651	si:ch211-271b14.1	90	55.714	ENSLACG00000006743	-	52	55.714	Latimeria_chalumnae
ENSELUG00000021651	si:ch211-271b14.1	95	42.718	ENSMFAG00000000634	-	82	42.718	Macaca_fascicularis
ENSELUG00000021651	si:ch211-271b14.1	50	32.117	ENSMMUG00000015963	-	61	32.117	Macaca_mulatta
ENSELUG00000021651	si:ch211-271b14.1	95	42.718	ENSMMUG00000016741	MATR3	82	42.718	Macaca_mulatta
ENSELUG00000021651	si:ch211-271b14.1	95	42.718	ENSMNEG00000042856	-	82	42.718	Macaca_nemestrina
ENSELUG00000021651	si:ch211-271b14.1	95	42.718	ENSMLEG00000041178	-	82	42.718	Mandrillus_leucophaeus
ENSELUG00000021651	si:ch211-271b14.1	80	46.154	ENSMAMG00000013840	matr3l1.1	55	49.020	Mastacembelus_armatus
ENSELUG00000021651	si:ch211-271b14.1	96	39.655	ENSMGAG00000001331	-	84	39.316	Meleagris_gallopavo
ENSELUG00000021651	si:ch211-271b14.1	82	52.239	ENSMAUG00000011647	Matr3	74	53.030	Mesocricetus_auratus
ENSELUG00000021651	si:ch211-271b14.1	64	44.118	ENSMICG00000012438	-	72	44.037	Microcebus_murinus
ENSELUG00000021651	si:ch211-271b14.1	83	43.689	ENSMOCG00000015711	Matr3	76	43.689	Microtus_ochrogaster
ENSELUG00000021651	si:ch211-271b14.1	86	52.941	ENSMODG00000011925	-	71	52.941	Monodelphis_domestica
ENSELUG00000021651	si:ch211-271b14.1	82	42.718	MGP_CAROLIEiJ_G0022108	Matr3	75	42.718	Mus_caroli
ENSELUG00000021651	si:ch211-271b14.1	82	42.718	ENSMUSG00000037236	Matr3	75	42.718	Mus_musculus
ENSELUG00000021651	si:ch211-271b14.1	84	42.718	MGP_PahariEiJ_G0018842	Matr3	75	42.718	Mus_pahari
ENSELUG00000021651	si:ch211-271b14.1	82	40.196	MGP_SPRETEiJ_G0023020	Matr3	75	40.196	Mus_spretus
ENSELUG00000021651	si:ch211-271b14.1	96	42.718	ENSMPUG00000009297	-	86	42.718	Mustela_putorius_furo
ENSELUG00000021651	si:ch211-271b14.1	82	42.718	ENSMLUG00000005798	-	67	42.718	Myotis_lucifugus
ENSELUG00000021651	si:ch211-271b14.1	86	42.718	ENSNGAG00000017452	Matr3	76	42.718	Nannospalax_galili
ENSELUG00000021651	si:ch211-271b14.1	86	42.718	ENSNLEG00000009093	-	76	42.718	Nomascus_leucogenys
ENSELUG00000021651	si:ch211-271b14.1	83	41.748	ENSOPRG00000016511	-	74	41.748	Ochotona_princeps
ENSELUG00000021651	si:ch211-271b14.1	84	43.689	ENSODEG00000003015	-	75	43.689	Octodon_degus
ENSELUG00000021651	si:ch211-271b14.1	83	42.718	ENSOCUG00000026311	MATR3	76	42.718	Oryctolagus_cuniculus
ENSELUG00000021651	si:ch211-271b14.1	83	42.718	ENSOGAG00000010607	-	76	42.718	Otolemur_garnettii
ENSELUG00000021651	si:ch211-271b14.1	86	42.718	ENSOARG00000016931	-	76	42.718	Ovis_aries
ENSELUG00000021651	si:ch211-271b14.1	64	43.434	ENSPPAG00000026720	-	67	43.434	Pan_paniscus
ENSELUG00000021651	si:ch211-271b14.1	95	42.718	ENSPPAG00000001418	-	82	42.718	Pan_paniscus
ENSELUG00000021651	si:ch211-271b14.1	83	42.718	ENSPPRG00000008004	-	76	42.718	Panthera_pardus
ENSELUG00000021651	si:ch211-271b14.1	83	42.718	ENSPTIG00000010711	-	80	42.718	Panthera_tigris_altaica
ENSELUG00000021651	si:ch211-271b14.1	95	42.718	ENSPTRG00000017294	MATR3	82	42.718	Pan_troglodytes
ENSELUG00000021651	si:ch211-271b14.1	64	42.718	ENSPANG00000032489	-	66	42.718	Papio_anubis
ENSELUG00000021651	si:ch211-271b14.1	95	42.718	ENSPANG00000012018	-	82	42.718	Papio_anubis
ENSELUG00000021651	si:ch211-271b14.1	75	65.909	ENSPKIG00000000333	matr3l1.1	56	62.264	Paramormyrops_kingsleyae
ENSELUG00000021651	si:ch211-271b14.1	80	56.061	ENSPSIG00000014598	-	78	56.061	Pelodiscus_sinensis
ENSELUG00000021651	si:ch211-271b14.1	83	42.718	ENSPEMG00000020679	Matr3	76	42.718	Peromyscus_maniculatus_bairdii
ENSELUG00000021651	si:ch211-271b14.1	95	42.718	ENSPPYG00000015835	-	82	42.718	Pongo_abelii
ENSELUG00000021651	si:ch211-271b14.1	83	42.718	ENSPCOG00000025718	-	76	42.718	Propithecus_coquereli
ENSELUG00000021651	si:ch211-271b14.1	94	44.898	ENSPVAG00000015431	-	83	44.898	Pteropus_vampyrus
ENSELUG00000021651	si:ch211-271b14.1	58	43.860	ENSPNYG00000015855	-	78	43.860	Pundamilia_nyererei
ENSELUG00000021651	si:ch211-271b14.1	79	52.632	ENSPNAG00000030007	si:ch211-271b14.1	99	52.632	Pygocentrus_nattereri
ENSELUG00000021651	si:ch211-271b14.1	82	39.216	ENSRNOG00000019875	Matr3	75	39.216	Rattus_norvegicus
ENSELUG00000021651	si:ch211-271b14.1	64	42.718	ENSRBIG00000034713	-	65	42.718	Rhinopithecus_bieti
ENSELUG00000021651	si:ch211-271b14.1	92	42.718	ENSRROG00000039415	-	81	42.718	Rhinopithecus_roxellana
ENSELUG00000021651	si:ch211-271b14.1	83	42.718	ENSRROG00000043949	-	75	42.718	Rhinopithecus_roxellana
ENSELUG00000021651	si:ch211-271b14.1	95	44.118	ENSSBOG00000030159	-	81	44.118	Saimiri_boliviensis_boliviensis
ENSELUG00000021651	si:ch211-271b14.1	85	52.941	ENSSHAG00000010331	-	72	52.941	Sarcophilus_harrisii
ENSELUG00000021651	si:ch211-271b14.1	50	32.547	ENSSFOG00015001838	-	55	32.787	Scleropages_formosus
ENSELUG00000021651	si:ch211-271b14.1	81	43.860	ENSSDUG00000015369	matr3l1.1	92	43.860	Seriola_dumerili
ENSELUG00000021651	si:ch211-271b14.1	70	53.521	ENSSPUG00000019236	-	51	53.521	Sphenodon_punctatus
ENSELUG00000021651	si:ch211-271b14.1	96	42.718	ENSSSCG00000014343	-	86	42.718	Sus_scrofa
ENSELUG00000021651	si:ch211-271b14.1	75	56.061	ENSTGUG00000014568	MATR3	78	60.714	Taeniopygia_guttata
ENSELUG00000021651	si:ch211-271b14.1	58	30.216	ENSTRUG00000001692	-	85	33.333	Takifugu_rubripes
ENSELUG00000021651	si:ch211-271b14.1	65	30.640	ENSTNIG00000003166	matr3l1.1	99	33.333	Tetraodon_nigroviridis
ENSELUG00000021651	si:ch211-271b14.1	71	32.117	ENSUAMG00000000097	-	74	32.117	Ursus_americanus
ENSELUG00000021651	si:ch211-271b14.1	96	42.718	ENSUMAG00000015808	-	87	42.718	Ursus_maritimus
ENSELUG00000021651	si:ch211-271b14.1	95	43.689	ENSVPAG00000006337	-	82	43.689	Vicugna_pacos
ENSELUG00000021651	si:ch211-271b14.1	83	45.455	ENSVVUG00000020287	-	76	42.718	Vulpes_vulpes
ENSELUG00000021651	si:ch211-271b14.1	87	65.455	ENSXETG00000003838	matr3	77	65.455	Xenopus_tropicalis
ENSELUG00000021651	si:ch211-271b14.1	73	34.483	ENSXMAG00000014107	-	79	34.066	Xiphophorus_maculatus