EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000021677 (Gene tree)
Gene ID: 105011489
Gene Symbol: larp6b
Alias: im:7142825|wu:fa55b04|zgc:162969
Full Name: la-related protein 6
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 4615 bases
Position: chrLG08:10697676-10702290
Accession: 105011489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000041009	La	PF05383.17	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000033802	-	4297	XM_010871544	ENSELUP00000041009	468 (aa)	XP_010869846	UPI0005762237

Gene Model

Click here to download ENSELUG00000021677's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000021677's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000021677	larp6b	91	34.194	ENSELUG00000018609	-	94	36.034
ENSELUG00000021677	larp6b	88	40.181	ENSELUG00000007341	larp6a	62	40.181

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000021677	larp6b	83	36.000	ENSAPOG00000003568	-	88	36.000	Acanthochromis_polyacanthus
ENSELUG00000021677	larp6b	83	36.725	ENSACIG00000008349	-	79	36.725	Amphilophus_citrinellus
ENSELUG00000021677	larp6b	86	36.471	ENSAOCG00000004646	larp6b	92	36.471	Amphiprion_ocellaris
ENSELUG00000021677	larp6b	86	36.385	ENSAPEG00000022748	-	91	36.385	Amphiprion_percula
ENSELUG00000021677	larp6b	86	37.408	ENSATEG00000021222	-	89	37.408	Anabas_testudineus
ENSELUG00000021677	larp6b	83	36.090	ENSACLG00000009988	larp6b	86	36.090	Astatotilapia_calliptera
ENSELUG00000021677	larp6b	99	60.123	ENSAMXG00000018956	larp6b	99	61.777	Astyanax_mexicanus
ENSELUG00000021677	larp6b	85	33.254	ENSCING00000008613	-	91	32.909	Ciona_intestinalis
ENSELUG00000021677	larp6b	50	40.254	ENSCSAVG00000011718	-	84	40.254	Ciona_savignyi
ENSELUG00000021677	larp6b	83	33.000	ENSCVAG00000012145	-	84	33.000	Cyprinodon_variegatus
ENSELUG00000021677	larp6b	100	63.825	ENSDARG00000003968	larp6b	100	65.217	Danio_rerio
ENSELUG00000021677	larp6b	83	35.840	ENSHBUG00000012344	larp6b	85	35.840	Haplochromis_burtoni
ENSELUG00000021677	larp6b	100	61.169	ENSIPUG00000007609	larp6b	100	61.169	Ictalurus_punctatus
ENSELUG00000021677	larp6b	58	50.769	ENSLBEG00000016460	-	75	50.769	Labrus_bergylta
ENSELUG00000021677	larp6b	89	36.806	ENSMAMG00000005509	-	92	36.806	Mastacembelus_armatus
ENSELUG00000021677	larp6b	83	35.840	ENSMZEG00005024390	larp6b	86	35.840	Maylandia_zebra
ENSELUG00000021677	larp6b	83	36.250	ENSNBRG00000012748	larp6b	86	36.250	Neolamprologus_brichardi
ENSELUG00000021677	larp6b	99	59.588	ENSPKIG00000025605	larp6b	97	60.124	Paramormyrops_kingsleyae
ENSELUG00000021677	larp6b	83	35.075	ENSPLAG00000005133	-	91	35.075	Poecilia_latipinna
ENSELUG00000021677	larp6b	83	35.572	ENSPMEG00000019947	-	92	35.572	Poecilia_mexicana
ENSELUG00000021677	larp6b	83	35.062	ENSPNYG00000007025	larp6b	83	35.062	Pundamilia_nyererei
ENSELUG00000021677	larp6b	99	64.033	ENSPNAG00000023854	larp6b	99	64.033	Pygocentrus_nattereri
ENSELUG00000021677	larp6b	85	38.177	ENSSLDG00000017081	-	80	38.177	Seriola_lalandi_dorsalis
ENSELUG00000021677	larp6b	83	37.530	ENSSPAG00000014320	-	85	39.901	Stegastes_partitus