EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000021706 (Gene tree)
Gene ID: 105020316
Gene Symbol: apex1
Alias: hm:zehn1532|wu:fc13d11|zap1|zgc:66204
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 2150 bases
Position: chrLG23:17169779-17171928
Accession: 105020316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000022798	Exo_endo_phos	PF03372.23	2.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000042422	-	1270	XM_010887250	ENSELUP00000022798	312 (aa)	XP_010885552	UPI000576650D

Gene Model

Click here to download ENSELUG00000021706's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000021706's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000021706	apex1	100	65.938	ENSG00000100823	APEX1	100	65.517	Homo_sapiens
ENSELUG00000021706	apex1	99	81.935	ENSAPOG00000017002	apex1	99	80.000	Acanthochromis_polyacanthus
ENSELUG00000021706	apex1	100	65.409	ENSAMEG00000005418	APEX1	100	64.465	Ailuropoda_melanoleuca
ENSELUG00000021706	apex1	89	87.004	ENSACIG00000010653	apex1	94	87.004	Amphilophus_citrinellus
ENSELUG00000021706	apex1	99	83.871	ENSAOCG00000009649	apex1	99	81.935	Amphiprion_ocellaris
ENSELUG00000021706	apex1	99	84.194	ENSAPEG00000021453	apex1	99	82.258	Amphiprion_percula
ENSELUG00000021706	apex1	99	83.495	ENSATEG00000002883	apex1	97	84.142	Anabas_testudineus
ENSELUG00000021706	apex1	80	30.492	ENSACAG00000011201	APEX2	59	30.464	Anolis_carolinensis
ENSELUG00000021706	apex1	100	66.246	ENSACAG00000008099	APEX1	87	72.101	Anolis_carolinensis
ENSELUG00000021706	apex1	100	65.723	ENSANAG00000030117	APEX1	100	65.723	Aotus_nancymaae
ENSELUG00000021706	apex1	88	87.636	ENSACLG00000018441	apex1	99	82.258	Astatotilapia_calliptera
ENSELUG00000021706	apex1	100	87.821	ENSAMXG00000034699	apex1	100	87.821	Astyanax_mexicanus
ENSELUG00000021706	apex1	100	64.151	ENSBTAG00000002745	APEX1	100	64.151	Bos_taurus
ENSELUG00000021706	apex1	90	43.007	WBGene00001372	exo-3	92	44.195	Caenorhabditis_elegans
ENSELUG00000021706	apex1	100	65.723	ENSCJAG00000009726	APEX1	100	65.723	Callithrix_jacchus
ENSELUG00000021706	apex1	100	66.562	ENSCAFG00000032033	APEX1	100	65.723	Canis_familiaris
ENSELUG00000021706	apex1	100	66.562	ENSCAFG00020014377	-	100	65.723	Canis_lupus_dingo
ENSELUG00000021706	apex1	54	59.770	ENSCAFG00020023002	-	96	58.140	Canis_lupus_dingo
ENSELUG00000021706	apex1	100	64.151	ENSCHIG00000007298	-	100	64.151	Capra_hircus
ENSELUG00000021706	apex1	88	54.545	ENSCHIG00000014537	-	87	54.545	Capra_hircus
ENSELUG00000021706	apex1	100	65.312	ENSTSYG00000034813	APEX1	100	64.465	Carlito_syrichta
ENSELUG00000021706	apex1	87	63.504	ENSCAPG00000016235	APEX1	91	69.492	Cavia_aperea
ENSELUG00000021706	apex1	100	65.723	ENSCPOG00000030909	APEX1	100	64.780	Cavia_porcellus
ENSELUG00000021706	apex1	100	65.723	ENSCCAG00000033056	-	100	65.723	Cebus_capucinus
ENSELUG00000021706	apex1	100	57.547	ENSCCAG00000031931	-	100	57.547	Cebus_capucinus
ENSELUG00000021706	apex1	100	65.204	ENSCATG00000015580	APEX1	100	65.204	Cercocebus_atys
ENSELUG00000021706	apex1	100	65.409	ENSCLAG00000001002	APEX1	100	65.409	Chinchilla_lanigera
ENSELUG00000021706	apex1	100	65.517	ENSCSAG00000016670	-	100	65.517	Chlorocebus_sabaeus
ENSELUG00000021706	apex1	100	65.517	ENSCSAG00000016685	-	100	65.517	Chlorocebus_sabaeus
ENSELUG00000021706	apex1	100	70.846	ENSCPBG00000009567	APEX1	100	70.846	Chrysemys_picta_bellii
ENSELUG00000021706	apex1	98	52.941	ENSCING00000008137	-	85	57.678	Ciona_intestinalis
ENSELUG00000021706	apex1	93	46.580	ENSCSAVG00000007144	-	100	51.938	Ciona_savignyi
ENSELUG00000021706	apex1	100	65.517	ENSCANG00000030726	APEX1	100	65.517	Colobus_angolensis_palliatus
ENSELUG00000021706	apex1	100	64.038	ENSCGRG00001017046	Apex1	100	63.722	Cricetulus_griseus_chok1gshd
ENSELUG00000021706	apex1	100	64.038	ENSCGRG00000008984	Apex1	100	63.722	Cricetulus_griseus_crigri
ENSELUG00000021706	apex1	99	81.613	ENSCSEG00000017499	apex1	99	81.290	Cynoglossus_semilaevis
ENSELUG00000021706	apex1	99	84.194	ENSCVAG00000022075	apex1	99	82.258	Cyprinodon_variegatus
ENSELUG00000021706	apex1	100	83.333	ENSDARG00000045843	apex1	100	83.013	Danio_rerio
ENSELUG00000021706	apex1	100	63.522	ENSDNOG00000042234	APEX1	95	62.579	Dasypus_novemcinctus
ENSELUG00000021706	apex1	100	66.038	ENSDORG00000001616	Apex1	100	65.094	Dipodomys_ordii
ENSELUG00000021706	apex1	100	66.667	ENSETEG00000004855	-	100	65.723	Echinops_telfairi
ENSELUG00000021706	apex1	76	60.084	ENSEBUG00000000622	-	92	60.084	Eptatretus_burgeri
ENSELUG00000021706	apex1	100	66.352	ENSEASG00005017489	APEX1	74	66.352	Equus_asinus_asinus
ENSELUG00000021706	apex1	100	66.352	ENSECAG00000022325	APEX1	82	66.352	Equus_caballus
ENSELUG00000021706	apex1	86	68.773	ENSEEUG00000012569	APEX1	93	68.914	Erinaceus_europaeus
ENSELUG00000021706	apex1	100	66.038	ENSFCAG00000030869	APEX1	100	65.094	Felis_catus
ENSELUG00000021706	apex1	100	66.667	ENSFDAG00000006120	APEX1	100	66.667	Fukomys_damarensis
ENSELUG00000021706	apex1	99	85.161	ENSFHEG00000009031	apex1	83	83.226	Fundulus_heteroclitus
ENSELUG00000021706	apex1	99	80.386	ENSGMOG00000007943	apex1	99	78.457	Gadus_morhua
ENSELUG00000021706	apex1	99	84.194	ENSGAFG00000005311	apex1	99	82.258	Gambusia_affinis
ENSELUG00000021706	apex1	99	85.161	ENSGACG00000019497	apex1	99	87.970	Gasterosteus_aculeatus
ENSELUG00000021706	apex1	100	70.846	ENSGAGG00000014999	APEX1	87	76.087	Gopherus_agassizii
ENSELUG00000021706	apex1	100	65.625	ENSGGOG00000002128	APEX1	100	65.204	Gorilla_gorilla
ENSELUG00000021706	apex1	99	81.613	ENSHBUG00000005894	apex1	99	82.258	Haplochromis_burtoni
ENSELUG00000021706	apex1	100	66.352	ENSHGLG00000002848	APEX1	100	66.352	Heterocephalus_glaber_female
ENSELUG00000021706	apex1	100	66.352	ENSHGLG00100017878	APEX1	100	66.352	Heterocephalus_glaber_male
ENSELUG00000021706	apex1	99	83.548	ENSHCOG00000009961	apex1	99	83.548	Hippocampus_comes
ENSELUG00000021706	apex1	100	83.974	ENSIPUG00000005799	apex1	100	83.974	Ictalurus_punctatus
ENSELUG00000021706	apex1	100	65.312	ENSSTOG00000010096	APEX1	100	65.094	Ictidomys_tridecemlineatus
ENSELUG00000021706	apex1	89	61.290	ENSJJAG00000020465	-	89	61.372	Jaculus_jaculus
ENSELUG00000021706	apex1	100	64.375	ENSJJAG00000012067	-	87	68.953	Jaculus_jaculus
ENSELUG00000021706	apex1	100	56.604	ENSJJAG00000003660	-	100	56.604	Jaculus_jaculus
ENSELUG00000021706	apex1	99	83.226	ENSKMAG00000021171	apex1	99	81.290	Kryptolebias_marmoratus
ENSELUG00000021706	apex1	99	83.871	ENSLBEG00000010248	apex1	99	82.524	Labrus_bergylta
ENSELUG00000021706	apex1	100	73.734	ENSLACG00000008617	APEX1	100	71.835	Latimeria_chalumnae
ENSELUG00000021706	apex1	100	80.000	ENSLOCG00000015516	apex1	99	78.730	Lepisosteus_oculatus
ENSELUG00000021706	apex1	100	65.723	ENSLAFG00000021872	APEX1	100	65.723	Loxodonta_africana
ENSELUG00000021706	apex1	100	64.890	ENSMFAG00000002565	APEX1	100	64.890	Macaca_fascicularis
ENSELUG00000021706	apex1	100	64.890	ENSMMUG00000048039	APEX1	100	64.890	Macaca_mulatta
ENSELUG00000021706	apex1	100	65.000	ENSMNEG00000036944	APEX1	100	64.890	Macaca_nemestrina
ENSELUG00000021706	apex1	100	65.204	ENSMLEG00000042125	APEX1	100	65.204	Mandrillus_leucophaeus
ENSELUG00000021706	apex1	99	83.871	ENSMAMG00000023526	apex1	99	81.935	Mastacembelus_armatus
ENSELUG00000021706	apex1	88	87.636	ENSMZEG00005014187	apex1	99	82.258	Maylandia_zebra
ENSELUG00000021706	apex1	100	63.950	ENSMAUG00000013994	Apex1	100	63.291	Mesocricetus_auratus
ENSELUG00000021706	apex1	100	65.312	ENSMICG00000043554	APEX1	100	64.151	Microcebus_murinus
ENSELUG00000021706	apex1	100	64.669	ENSMOCG00000013721	Apex1	100	64.353	Microtus_ochrogaster
ENSELUG00000021706	apex1	99	82.958	ENSMMOG00000010031	apex1	97	81.350	Mola_mola
ENSELUG00000021706	apex1	89	68.817	ENSMODG00000007125	APEX1	100	62.813	Monodelphis_domestica
ENSELUG00000021706	apex1	90	80.357	ENSMALG00000011699	apex1	74	80.144	Monopterus_albus
ENSELUG00000021706	apex1	99	66.139	MGP_CAROLIEiJ_G0019209	Apex1	99	65.823	Mus_caroli
ENSELUG00000021706	apex1	100	65.931	ENSMUSG00000035960	Apex1	100	65.300	Mus_musculus
ENSELUG00000021706	apex1	88	70.397	MGP_PahariEiJ_G0030232	Apex1	100	65.300	Mus_pahari
ENSELUG00000021706	apex1	100	65.931	MGP_SPRETEiJ_G0020101	Apex1	100	65.300	Mus_spretus
ENSELUG00000021706	apex1	100	64.174	ENSMLUG00000028957	APEX1	86	69.565	Myotis_lucifugus
ENSELUG00000021706	apex1	100	65.409	ENSNGAG00000002725	-	100	64.465	Nannospalax_galili
ENSELUG00000021706	apex1	88	52.313	ENSNGAG00000021748	-	86	51.613	Nannospalax_galili
ENSELUG00000021706	apex1	88	87.636	ENSNBRG00000005334	apex1	91	82.258	Neolamprologus_brichardi
ENSELUG00000021706	apex1	100	65.625	ENSNLEG00000010839	APEX1	100	65.204	Nomascus_leucogenys
ENSELUG00000021706	apex1	100	64.669	ENSMEUG00000014519	APEX1	100	63.376	Notamacropus_eugenii
ENSELUG00000021706	apex1	100	64.890	ENSOPRG00000014029	APEX1	100	64.780	Ochotona_princeps
ENSELUG00000021706	apex1	100	51.852	ENSODEG00000006583	-	86	54.417	Octodon_degus
ENSELUG00000021706	apex1	97	50.825	ENSODEG00000004777	-	83	56.349	Octodon_degus
ENSELUG00000021706	apex1	100	65.723	ENSODEG00000001703	-	100	65.723	Octodon_degus
ENSELUG00000021706	apex1	88	88.043	ENSONIG00000012089	apex1	99	82.258	Oreochromis_niloticus
ENSELUG00000021706	apex1	88	71.273	ENSOANG00000008836	APEX1	80	65.123	Ornithorhynchus_anatinus
ENSELUG00000021706	apex1	100	66.250	ENSOCUG00000005022	APEX1	100	65.723	Oryctolagus_cuniculus
ENSELUG00000021706	apex1	99	86.817	ENSORLG00000012378	apex1	99	84.887	Oryzias_latipes
ENSELUG00000021706	apex1	99	86.817	ENSORLG00020021371	apex1	99	84.887	Oryzias_latipes_hni
ENSELUG00000021706	apex1	99	86.817	ENSORLG00015020089	apex1	99	84.887	Oryzias_latipes_hsok
ENSELUG00000021706	apex1	99	85.852	ENSOMEG00000018876	apex1	99	83.923	Oryzias_melastigma
ENSELUG00000021706	apex1	89	61.290	ENSOGAG00000029355	-	88	61.372	Otolemur_garnettii
ENSELUG00000021706	apex1	100	65.625	ENSOGAG00000013335	-	100	65.409	Otolemur_garnettii
ENSELUG00000021706	apex1	97	61.364	ENSOARG00000001876	-	100	61.364	Ovis_aries
ENSELUG00000021706	apex1	95	56.667	ENSOARG00000014424	-	87	58.242	Ovis_aries
ENSELUG00000021706	apex1	100	64.465	ENSOARG00000019740	-	100	64.465	Ovis_aries
ENSELUG00000021706	apex1	100	65.938	ENSPPAG00000038760	APEX1	100	65.517	Pan_paniscus
ENSELUG00000021706	apex1	100	65.723	ENSPPRG00000011794	APEX1	100	65.409	Panthera_pardus
ENSELUG00000021706	apex1	100	66.038	ENSPTIG00000014829	APEX1	100	65.094	Panthera_tigris_altaica
ENSELUG00000021706	apex1	100	65.938	ENSPTRG00000006093	APEX1	100	65.517	Pan_troglodytes
ENSELUG00000021706	apex1	100	65.204	ENSPANG00000022757	APEX1	100	65.204	Papio_anubis
ENSELUG00000021706	apex1	94	87.075	ENSPKIG00000003504	apex1	100	85.669	Paramormyrops_kingsleyae
ENSELUG00000021706	apex1	86	75.093	ENSPMGG00000016596	apex1	79	75.093	Periophthalmus_magnuspinnatus
ENSELUG00000021706	apex1	100	64.669	ENSPEMG00000019097	Apex1	100	64.353	Peromyscus_maniculatus_bairdii
ENSELUG00000021706	apex1	93	72.014	ENSPMAG00000007275	-	94	72.924	Petromyzon_marinus
ENSELUG00000021706	apex1	89	67.742	ENSPCIG00000023274	APEX1	86	68.613	Phascolarctos_cinereus
ENSELUG00000021706	apex1	99	84.839	ENSPFOG00000004178	apex1	99	82.903	Poecilia_formosa
ENSELUG00000021706	apex1	99	84.516	ENSPLAG00000012779	apex1	99	82.581	Poecilia_latipinna
ENSELUG00000021706	apex1	99	84.839	ENSPMEG00000019623	apex1	99	82.903	Poecilia_mexicana
ENSELUG00000021706	apex1	99	84.194	ENSPREG00000014298	apex1	99	82.258	Poecilia_reticulata
ENSELUG00000021706	apex1	100	65.312	ENSPPYG00000005565	APEX1	100	64.890	Pongo_abelii
ENSELUG00000021706	apex1	100	63.208	ENSPCAG00000010376	APEX1	100	63.208	Procavia_capensis
ENSELUG00000021706	apex1	100	65.625	ENSPCOG00000021564	APEX1	100	64.465	Propithecus_coquereli
ENSELUG00000021706	apex1	100	65.839	ENSPVAG00000010736	APEX1	87	69.675	Pteropus_vampyrus
ENSELUG00000021706	apex1	88	88.000	ENSPNYG00000023940	apex1	99	82.581	Pundamilia_nyererei
ENSELUG00000021706	apex1	96	84.667	ENSPNAG00000020897	apex1	96	87.153	Pygocentrus_nattereri
ENSELUG00000021706	apex1	100	65.300	ENSRNOG00000009663	Apex1	100	64.984	Rattus_norvegicus
ENSELUG00000021706	apex1	100	65.517	ENSRBIG00000038325	APEX1	99	65.517	Rhinopithecus_bieti
ENSELUG00000021706	apex1	100	65.723	ENSSBOG00000018921	-	100	65.723	Saimiri_boliviensis_boliviensis
ENSELUG00000021706	apex1	100	58.466	ENSSBOG00000031372	-	90	61.733	Saimiri_boliviensis_boliviensis
ENSELUG00000021706	apex1	100	61.846	ENSSHAG00000013524	APEX1	100	61.846	Sarcophilus_harrisii
ENSELUG00000021706	apex1	100	84.295	ENSSFOG00015001948	apex1	100	84.295	Scleropages_formosus
ENSELUG00000021706	apex1	99	82.540	ENSSMAG00000013348	apex1	99	82.222	Scophthalmus_maximus
ENSELUG00000021706	apex1	99	85.484	ENSSDUG00000016377	apex1	99	83.226	Seriola_dumerili
ENSELUG00000021706	apex1	99	85.161	ENSSLDG00000023005	apex1	99	82.903	Seriola_lalandi_dorsalis
ENSELUG00000021706	apex1	99	68.489	ENSSPUG00000000531	APEX1	93	73.455	Sphenodon_punctatus
ENSELUG00000021706	apex1	99	83.923	ENSSPAG00000000458	apex1	99	81.994	Stegastes_partitus
ENSELUG00000021706	apex1	100	65.723	ENSSSCG00000040060	-	100	65.723	Sus_scrofa
ENSELUG00000021706	apex1	87	41.155	ENSSSCG00000039705	-	89	41.155	Sus_scrofa
ENSELUG00000021706	apex1	75	56.170	ENSTGUG00000014378	APEX1	100	56.170	Taeniopygia_guttata
ENSELUG00000021706	apex1	89	86.282	ENSTRUG00000004268	apex1	95	81.270	Takifugu_rubripes
ENSELUG00000021706	apex1	99	83.871	ENSTNIG00000005778	apex1	99	82.258	Tetraodon_nigroviridis
ENSELUG00000021706	apex1	100	62.893	ENSTBEG00000006405	APEX1	100	61.950	Tupaia_belangeri
ENSELUG00000021706	apex1	75	68.511	ENSTTRG00000007860	APEX1	100	68.511	Tursiops_truncatus
ENSELUG00000021706	apex1	100	65.409	ENSUAMG00000010457	APEX1	100	64.151	Ursus_americanus
ENSELUG00000021706	apex1	100	65.409	ENSUMAG00000009178	APEX1	100	64.151	Ursus_maritimus
ENSELUG00000021706	apex1	75	64.255	ENSVPAG00000005083	APEX1	100	64.255	Vicugna_pacos
ENSELUG00000021706	apex1	100	66.562	ENSVVUG00000009010	APEX1	100	65.723	Vulpes_vulpes
ENSELUG00000021706	apex1	100	69.085	ENSXETG00000024773	apex1	100	67.722	Xenopus_tropicalis
ENSELUG00000021706	apex1	99	84.516	ENSXCOG00000015233	apex1	99	82.581	Xiphophorus_couchianus
ENSELUG00000021706	apex1	99	84.516	ENSXMAG00000006195	apex1	99	82.581	Xiphophorus_maculatus