EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000021817 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 42506 bases
Position: chrLG06:19324941-19367446
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000041094	zf-met	PF12874.7	8.9e-15	1	2
ENSELUP00000041094	zf-met	PF12874.7	8.9e-15	2	2
ENSELUP00000041090	zf-met	PF12874.7	1.7e-12	1	2
ENSELUP00000041090	zf-met	PF12874.7	1.7e-12	2	2
ENSELUP00000041094	zf-C2H2_jaz	PF12171.8	3.5e-10	1	1
ENSELUP00000041090	zf-C2H2_jaz	PF12171.8	4.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000042455	-	600	-	ENSELUP00000041090	199 (aa)	-	-
ENSELUT00000042459	-	836	-	ENSELUP00000041094	139 (aa)	-	-

Gene Model

Click here to download ENSELUG00000021817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000021817's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000021817	zgc:171482	91	47.863	ENSELUG00000011376	znf346	64	47.863
ENSELUG00000021817	zgc:171482	93	66.142	ENSELUG00000005097	zmat4a	74	69.828
ENSELUG00000021817	zgc:171482	97	64.706	ENSELUG00000017517	-	60	85.393

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000021817	zgc:171482	94	88.462	ENSAPOG00000019970	zgc:171482	79	93.443	Acanthochromis_polyacanthus
ENSELUG00000021817	zgc:171482	84	94.872	ENSACIG00000021512	zgc:171482	87	94.872	Amphilophus_citrinellus
ENSELUG00000021817	zgc:171482	98	86.765	ENSAOCG00000000751	zgc:171482	97	86.765	Amphiprion_ocellaris
ENSELUG00000021817	zgc:171482	96	88.722	ENSAPEG00000014154	zgc:171482	96	88.722	Amphiprion_percula
ENSELUG00000021817	zgc:171482	81	96.429	ENSATEG00000001371	zgc:171482	79	93.277	Anabas_testudineus
ENSELUG00000021817	zgc:171482	99	84.397	ENSACLG00000010511	zgc:171482	98	84.397	Astatotilapia_calliptera
ENSELUG00000021817	zgc:171482	93	87.597	ENSAMXG00000002299	zgc:171482	97	87.597	Astyanax_mexicanus
ENSELUG00000021817	zgc:171482	89	89.516	ENSCSEG00000006509	zgc:171482	73	96.396	Cynoglossus_semilaevis
ENSELUG00000021817	zgc:171482	85	94.068	ENSCVAG00000013606	zgc:171482	80	94.068	Cyprinodon_variegatus
ENSELUG00000021817	zgc:171482	90	88.000	ENSDARG00000074415	zgc:171482	98	83.969	Danio_rerio
ENSELUG00000021817	zgc:171482	93	89.922	ENSFHEG00000002233	zgc:171482	92	89.922	Fundulus_heteroclitus
ENSELUG00000021817	zgc:171482	90	93.600	ENSGMOG00000010508	zgc:171482	79	94.262	Gadus_morhua
ENSELUG00000021817	zgc:171482	85	94.915	ENSGAFG00000009398	zgc:171482	77	94.915	Gambusia_affinis
ENSELUG00000021817	zgc:171482	90	92.800	ENSGACG00000007680	zgc:171482	80	94.262	Gasterosteus_aculeatus
ENSELUG00000021817	zgc:171482	94	89.231	ENSHBUG00000023289	zgc:171482	98	89.231	Haplochromis_burtoni
ENSELUG00000021817	zgc:171482	96	82.836	ENSHCOG00000018086	zgc:171482	100	82.836	Hippocampus_comes
ENSELUG00000021817	zgc:171482	92	86.719	ENSIPUG00000000361	zgc:171482	93	86.719	Ictalurus_punctatus
ENSELUG00000021817	zgc:171482	96	87.970	ENSKMAG00000005077	zgc:171482	68	91.803	Kryptolebias_marmoratus
ENSELUG00000021817	zgc:171482	94	87.023	ENSLBEG00000023823	zgc:171482	94	87.023	Labrus_bergylta
ENSELUG00000021817	zgc:171482	87	89.256	ENSLOCG00000008863	zgc:171482	77	89.256	Lepisosteus_oculatus
ENSELUG00000021817	zgc:171482	94	90.000	ENSMAMG00000001031	zgc:171482	83	87.121	Mastacembelus_armatus
ENSELUG00000021817	zgc:171482	95	81.818	ENSMZEG00005027721	zgc:171482	79	89.831	Maylandia_zebra
ENSELUG00000021817	zgc:171482	93	90.698	ENSMMOG00000010523	zgc:171482	98	90.698	Mola_mola
ENSELUG00000021817	zgc:171482	94	87.786	ENSMALG00000017883	zgc:171482	80	92.683	Monopterus_albus
ENSELUG00000021817	zgc:171482	100	83.453	ENSNBRG00000021035	zgc:171482	83	98.198	Neolamprologus_brichardi
ENSELUG00000021817	zgc:171482	90	92.000	ENSONIG00000018365	zgc:171482	78	92.623	Oreochromis_niloticus
ENSELUG00000021817	zgc:171482	97	87.407	ENSORLG00000007607	zgc:171482	95	87.407	Oryzias_latipes
ENSELUG00000021817	zgc:171482	97	86.667	ENSORLG00020003563	zgc:171482	95	86.667	Oryzias_latipes_hni
ENSELUG00000021817	zgc:171482	97	87.407	ENSORLG00015008552	zgc:171482	95	87.407	Oryzias_latipes_hsok
ENSELUG00000021817	zgc:171482	92	90.625	ENSOMEG00000003526	zgc:171482	90	90.625	Oryzias_melastigma
ENSELUG00000021817	zgc:171482	79	90.000	ENSPKIG00000016244	zgc:171482	78	90.000	Paramormyrops_kingsleyae
ENSELUG00000021817	zgc:171482	86	92.500	ENSPKIG00000015911	-	83	92.500	Paramormyrops_kingsleyae
ENSELUG00000021817	zgc:171482	90	92.800	ENSPMGG00000020230	zgc:171482	82	93.443	Periophthalmus_magnuspinnatus
ENSELUG00000021817	zgc:171482	96	88.722	ENSPFOG00000001974	zgc:171482	78	92.623	Poecilia_formosa
ENSELUG00000021817	zgc:171482	91	90.551	ENSPLAG00000003327	zgc:171482	79	92.623	Poecilia_latipinna
ENSELUG00000021817	zgc:171482	91	90.551	ENSPMEG00000004988	zgc:171482	77	90.551	Poecilia_mexicana
ENSELUG00000021817	zgc:171482	99	86.131	ENSPREG00000019241	zgc:171482	97	86.131	Poecilia_reticulata
ENSELUG00000021817	zgc:171482	99	84.397	ENSPNYG00000007773	zgc:171482	98	84.397	Pundamilia_nyererei
ENSELUG00000021817	zgc:171482	80	96.396	ENSPNAG00000007619	zgc:171482	79	90.083	Pygocentrus_nattereri
ENSELUG00000021817	zgc:171482	84	86.325	ENSSFOG00015016149	zgc:171482	94	86.325	Scleropages_formosus
ENSELUG00000021817	zgc:171482	86	86.667	ENSSFOG00015021238	zgc:171482	81	86.667	Scleropages_formosus
ENSELUG00000021817	zgc:171482	97	87.407	ENSSMAG00000002715	zgc:171482	87	87.407	Scophthalmus_maximus
ENSELUG00000021817	zgc:171482	97	87.407	ENSSDUG00000008773	zgc:171482	95	87.407	Seriola_dumerili
ENSELUG00000021817	zgc:171482	90	92.800	ENSSLDG00000019510	zgc:171482	88	92.800	Seriola_lalandi_dorsalis
ENSELUG00000021817	zgc:171482	88	93.496	ENSSPAG00000013724	zgc:171482	98	93.496	Stegastes_partitus
ENSELUG00000021817	zgc:171482	80	96.396	ENSTRUG00000005705	zgc:171482	66	96.396	Takifugu_rubripes
ENSELUG00000021817	zgc:171482	88	66.667	ENSTNIG00000008679	zgc:171482	80	67.188	Tetraodon_nigroviridis
ENSELUG00000021817	zgc:171482	69	88.889	ENSXETG00000013525	zmat4	78	88.889	Xenopus_tropicalis
ENSELUG00000021817	zgc:171482	85	84.874	ENSXMAG00000002641	zgc:171482	77	83.898	Xiphophorus_maculatus