EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000021847 (Gene tree)
Gene ID: 105015939
Gene Symbol: rbm25a
Alias: si:ch211-12d10.5
Full Name: RNA-binding protein 25
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 11241 bases
Position: chrLG15:25519237-25530477
Accession: 105015939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000041102	RRM_1	PF00076.22	7.1e-07	1	1
ENSELUP00000041102	PWI	PF01480.17	1.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000033969	-	2358	XM_013137560	ENSELUP00000041102	785 (aa)	XP_012993014	-

Gene Model

Click here to download ENSELUG00000021847's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000021847's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000021847	rbm25a	65	79.920	ENSELUG00000007730	rbm25b	89	72.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000021847	rbm25a	52	62.955	ENSAPOG00000015321	rbm25b	57	66.164	Acanthochromis_polyacanthus
ENSELUG00000021847	rbm25a	51	72.979	ENSAPOG00000017757	rbm25a	56	74.134	Acanthochromis_polyacanthus
ENSELUG00000021847	rbm25a	52	67.627	ENSACIG00000014178	rbm25b	56	68.080	Amphilophus_citrinellus
ENSELUG00000021847	rbm25a	51	69.163	ENSACIG00000019482	rbm25a	56	70.130	Amphilophus_citrinellus
ENSELUG00000021847	rbm25a	53	66.816	ENSAOCG00000019308	rbm25b	56	67.882	Amphiprion_ocellaris
ENSELUG00000021847	rbm25a	51	73.934	ENSAOCG00000013695	rbm25a	55	74.478	Amphiprion_ocellaris
ENSELUG00000021847	rbm25a	51	73.934	ENSAPEG00000007514	rbm25a	56	74.478	Amphiprion_percula
ENSELUG00000021847	rbm25a	54	67.478	ENSAPEG00000009666	rbm25b	59	66.307	Amphiprion_percula
ENSELUG00000021847	rbm25a	52	69.181	ENSATEG00000020676	rbm25a	64	73.370	Anabas_testudineus
ENSELUG00000021847	rbm25a	53	67.946	ENSATEG00000017312	rbm25b	58	68.326	Anabas_testudineus
ENSELUG00000021847	rbm25a	52	64.693	ENSACLG00000024359	rbm25b	57	65.733	Astatotilapia_calliptera
ENSELUG00000021847	rbm25a	85	74.766	ENSACLG00000027482	rbm25a	86	76.168	Astatotilapia_calliptera
ENSELUG00000021847	rbm25a	65	77.959	ENSAMXG00000024525	rbm25b	55	70.044	Astyanax_mexicanus
ENSELUG00000021847	rbm25a	56	90.000	ENSCHOG00000008903	RBM25	61	89.796	Choloepus_hoffmanni
ENSELUG00000021847	rbm25a	52	66.900	ENSCSEG00000020737	rbm25b	54	68.150	Cynoglossus_semilaevis
ENSELUG00000021847	rbm25a	51	67.174	ENSCSEG00000009430	rbm25a	57	67.532	Cynoglossus_semilaevis
ENSELUG00000021847	rbm25a	53	61.277	ENSCVAG00000003478	rbm25b	57	62.876	Cyprinodon_variegatus
ENSELUG00000021847	rbm25a	52	75.096	ENSCVAG00000005498	rbm25a	93	76.331	Cyprinodon_variegatus
ENSELUG00000021847	rbm25a	82	67.726	ENSEEUG00000007350	RBM25	83	69.805	Erinaceus_europaeus
ENSELUG00000021847	rbm25a	53	64.768	ENSFHEG00000003513	rbm25b	58	65.385	Fundulus_heteroclitus
ENSELUG00000021847	rbm25a	85	68.571	ENSGMOG00000014097	rbm25b	91	68.443	Gadus_morhua
ENSELUG00000021847	rbm25a	78	78.070	ENSGMOG00000014070	rbm25a	87	77.533	Gadus_morhua
ENSELUG00000021847	rbm25a	52	70.880	ENSGAFG00000018036	rbm25a	55	78.947	Gambusia_affinis
ENSELUG00000021847	rbm25a	100	57.952	ENSGAFG00000001092	rbm25b	50	64.905	Gambusia_affinis
ENSELUG00000021847	rbm25a	51	74.766	ENSHBUG00000016908	rbm25a	53	76.168	Haplochromis_burtoni
ENSELUG00000021847	rbm25a	52	64.912	ENSHBUG00000018499	rbm25b	57	65.948	Haplochromis_burtoni
ENSELUG00000021847	rbm25a	100	60.291	ENSHCOG00000000142	rbm25b	59	73.488	Hippocampus_comes
ENSELUG00000021847	rbm25a	51	65.094	ENSKMAG00000018826	rbm25b	57	65.086	Kryptolebias_marmoratus
ENSELUG00000021847	rbm25a	55	64.905	ENSKMAG00000016242	rbm25a	61	76.016	Kryptolebias_marmoratus
ENSELUG00000021847	rbm25a	54	70.270	ENSLBEG00000010667	rbm25b	55	71.163	Labrus_bergylta
ENSELUG00000021847	rbm25a	54	67.421	ENSMAMG00000004524	rbm25b	54	68.360	Mastacembelus_armatus
ENSELUG00000021847	rbm25a	52	64.693	ENSMZEG00005001453	rbm25b	57	65.733	Maylandia_zebra
ENSELUG00000021847	rbm25a	51	74.766	ENSMZEG00005011183	rbm25a	56	76.168	Maylandia_zebra
ENSELUG00000021847	rbm25a	52	72.603	ENSMMOG00000009065	rbm25a	56	73.684	Mola_mola
ENSELUG00000021847	rbm25a	50	64.811	ENSMALG00000020441	rbm25b	91	62.917	Monopterus_albus
ENSELUG00000021847	rbm25a	50	63.895	ENSMLUG00000024167	-	51	64.055	Myotis_lucifugus
ENSELUG00000021847	rbm25a	52	69.178	ENSMLUG00000015434	-	51	70.118	Myotis_lucifugus
ENSELUG00000021847	rbm25a	51	69.757	ENSNBRG00000003761	rbm25a	56	70.933	Neolamprologus_brichardi
ENSELUG00000021847	rbm25a	52	64.474	ENSNBRG00000022192	rbm25b	55	64.381	Neolamprologus_brichardi
ENSELUG00000021847	rbm25a	100	60.400	ENSOCUG00000013737	RBM25	50	69.355	Oryctolagus_cuniculus
ENSELUG00000021847	rbm25a	52	64.668	ENSORLG00000011874	rbm25b	56	64.224	Oryzias_latipes
ENSELUG00000021847	rbm25a	52	67.606	ENSORLG00020016422	rbm25b	53	68.720	Oryzias_latipes_hni
ENSELUG00000021847	rbm25a	52	64.240	ENSORLG00015011269	rbm25b	56	63.793	Oryzias_latipes_hsok
ENSELUG00000021847	rbm25a	52	64.978	ENSOMEG00000023172	rbm25b	56	65.939	Oryzias_melastigma
ENSELUG00000021847	rbm25a	53	68.308	ENSPKIG00000003203	rbm25b	56	69.783	Paramormyrops_kingsleyae
ENSELUG00000021847	rbm25a	50	63.516	ENSPFOG00000018808	rbm25b	88	66.790	Poecilia_formosa
ENSELUG00000021847	rbm25a	52	72.686	ENSPLAG00000018338	rbm25a	54	75.291	Poecilia_latipinna
ENSELUG00000021847	rbm25a	50	63.516	ENSPMEG00000019161	rbm25b	88	67.159	Poecilia_mexicana
ENSELUG00000021847	rbm25a	52	72.686	ENSPMEG00000024470	rbm25a	54	75.291	Poecilia_mexicana
ENSELUG00000021847	rbm25a	51	73.770	ENSPREG00000009228	rbm25a	56	74.312	Poecilia_reticulata
ENSELUG00000021847	rbm25a	78	68.765	ENSPCAG00000006226	RBM25	78	72.458	Procavia_capensis
ENSELUG00000021847	rbm25a	51	74.766	ENSPNYG00000022596	rbm25a	53	76.168	Pundamilia_nyererei
ENSELUG00000021847	rbm25a	52	64.693	ENSPNYG00000023303	rbm25b	55	64.602	Pundamilia_nyererei
ENSELUG00000021847	rbm25a	51	69.383	ENSSDUG00000017984	rbm25a	58	69.978	Seriola_dumerili
ENSELUG00000021847	rbm25a	51	69.383	ENSSLDG00000010342	rbm25a	57	69.978	Seriola_lalandi_dorsalis
ENSELUG00000021847	rbm25a	51	65.076	ENSSLDG00000024573	rbm25b	100	65.510	Seriola_lalandi_dorsalis
ENSELUG00000021847	rbm25a	54	65.136	ENSSPAG00000016168	rbm25b	57	65.880	Stegastes_partitus
ENSELUG00000021847	rbm25a	51	67.452	ENSSPAG00000011114	rbm25a	90	74.275	Stegastes_partitus
ENSELUG00000021847	rbm25a	52	68.372	ENSTRUG00000017964	rbm25b	54	68.650	Takifugu_rubripes
ENSELUG00000021847	rbm25a	52	64.163	ENSTRUG00000003076	rbm25a	59	64.706	Takifugu_rubripes
ENSELUG00000021847	rbm25a	95	59.799	ENSTNIG00000012222	rbm25b	69	68.721	Tetraodon_nigroviridis
ENSELUG00000021847	rbm25a	56	76.984	ENSTBEG00000010538	-	56	76.000	Tupaia_belangeri
ENSELUG00000021847	rbm25a	78	68.765	ENSVPAG00000009052	RBM25	89	69.492	Vicugna_pacos
ENSELUG00000021847	rbm25a	95	61.118	ENSXETG00000021857	rbm25	56	70.481	Xenopus_tropicalis
ENSELUG00000021847	rbm25a	53	70.222	ENSXCOG00000004043	RBM25	55	73.441	Xiphophorus_couchianus
ENSELUG00000021847	rbm25a	100	58.100	ENSXMAG00000017290	rbm25b	57	64.421	Xiphophorus_maculatus