EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000021848 (Gene tree)
Gene ID: 105030671
Gene Symbol: matr3l1.1
Alias: matr3l|si:bz1d10.2|wu:fb78d04|wu:fc09f04|wu:fe36a04
Full Name: matrin-3
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 13440 bases
Position: chrLG04:22881258-22894697
Accession: 105030671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000022909	RRM_5	PF13893.6	9.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000042460	-	5120	XM_010904666	ENSELUP00000022909	1137 (aa)	XP_010902968	UPI0005771EA3
ENSELUT00000042469	-	2106	-	ENSELUP00000022927	701 (aa)	-	-

Gene Model

Click here to download ENSELUG00000021848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000021848's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000021848	matr3l1.1	84	45.946	ENSELUG00000021651	si:ch211-271b14.1	80	50.980
ENSELUG00000021848	matr3l1.1	52	47.826	ENSELUG00000022000	-	71	33.677

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000021848	matr3l1.1	74	52.381	ENSG00000015479	MATR3	99	36.585	Homo_sapiens
ENSELUG00000021848	matr3l1.1	74	51.515	ENSAMEG00000011347	-	69	49.123	Ailuropoda_melanoleuca
ENSELUG00000021848	matr3l1.1	94	51.515	ENSAPLG00000008118	-	88	51.923	Anas_platyrhynchos
ENSELUG00000021848	matr3l1.1	87	60.377	ENSACAG00000016233	-	88	58.333	Anolis_carolinensis
ENSELUG00000021848	matr3l1.1	75	51.515	ENSANAG00000022951	-	94	30.176	Aotus_nancymaae
ENSELUG00000021848	matr3l1.1	62	35.294	ENSANAG00000024654	-	80	35.294	Aotus_nancymaae
ENSELUG00000021848	matr3l1.1	63	49.770	ENSACLG00000015903	matr3l1.1	82	50.939	Astatotilapia_calliptera
ENSELUG00000021848	matr3l1.1	95	54.959	ENSAMXG00000010685	matr3l1.1	99	59.341	Astyanax_mexicanus
ENSELUG00000021848	matr3l1.1	99	51.416	ENSAMXG00000010681	matr3l1.1	99	51.839	Astyanax_mexicanus
ENSELUG00000021848	matr3l1.1	68	36.471	ENSBTAG00000006756	MATR3	66	36.471	Bos_taurus
ENSELUG00000021848	matr3l1.1	75	51.515	ENSCJAG00000006888	-	74	49.123	Callithrix_jacchus
ENSELUG00000021848	matr3l1.1	74	51.515	ENSCAFG00000001345	MATR3	73	49.123	Canis_familiaris
ENSELUG00000021848	matr3l1.1	75	50.000	ENSCAFG00020010504	-	74	49.123	Canis_lupus_dingo
ENSELUG00000021848	matr3l1.1	86	51.515	ENSCHIG00000025746	-	73	49.123	Capra_hircus
ENSELUG00000021848	matr3l1.1	60	51.515	ENSTSYG00000011028	-	86	30.539	Carlito_syrichta
ENSELUG00000021848	matr3l1.1	74	52.381	ENSCPOG00000014076	-	94	30.396	Cavia_porcellus
ENSELUG00000021848	matr3l1.1	75	51.515	ENSCCAG00000025074	-	94	30.176	Cebus_capucinus
ENSELUG00000021848	matr3l1.1	58	51.515	ENSCATG00000041304	-	73	49.123	Cercocebus_atys
ENSELUG00000021848	matr3l1.1	59	52.381	ENSCLAG00000015998	-	86	36.471	Chinchilla_lanigera
ENSELUG00000021848	matr3l1.1	76	51.515	ENSCSAG00000013075	-	86	36.471	Chlorocebus_sabaeus
ENSELUG00000021848	matr3l1.1	93	35.032	ENSCPBG00000006303	-	87	33.208	Chrysemys_picta_bellii
ENSELUG00000021848	matr3l1.1	76	51.515	ENSCANG00000028224	-	69	49.123	Colobus_angolensis_palliatus
ENSELUG00000021848	matr3l1.1	60	51.515	ENSCGRG00001020227	Matr3	86	36.471	Cricetulus_griseus_chok1gshd
ENSELUG00000021848	matr3l1.1	60	51.515	ENSCGRG00000011298	Matr3	86	36.471	Cricetulus_griseus_crigri
ENSELUG00000021848	matr3l1.1	99	46.872	ENSCSEG00000012682	matr3l1.1	99	47.245	Cynoglossus_semilaevis
ENSELUG00000021848	matr3l1.1	99	46.101	ENSCVAG00000005337	matr3l1.1	99	46.926	Cyprinodon_variegatus
ENSELUG00000021848	matr3l1.1	75	53.030	ENSDNOG00000037723	-	69	50.877	Dasypus_novemcinctus
ENSELUG00000021848	matr3l1.1	74	51.515	ENSEASG00005020857	-	83	36.471	Equus_asinus_asinus
ENSELUG00000021848	matr3l1.1	74	51.515	ENSECAG00000012882	MATR3	83	36.471	Equus_caballus
ENSELUG00000021848	matr3l1.1	86	51.515	ENSFCAG00000021911	-	88	32.886	Felis_catus
ENSELUG00000021848	matr3l1.1	90	54.098	ENSFALG00000003071	-	76	51.923	Ficedula_albicollis
ENSELUG00000021848	matr3l1.1	60	51.515	ENSFDAG00000017675	-	73	49.123	Fukomys_damarensis
ENSELUG00000021848	matr3l1.1	93	54.098	ENSGALG00000002478	MATR3	73	51.923	Gallus_gallus
ENSELUG00000021848	matr3l1.1	93	34.395	ENSGAGG00000011386	-	87	33.208	Gopherus_agassizii
ENSELUG00000021848	matr3l1.1	75	51.515	ENSGGOG00000007308	-	75	49.123	Gorilla_gorilla
ENSELUG00000021848	matr3l1.1	60	51.515	ENSHGLG00000004673	MATR3	94	30.310	Heterocephalus_glaber_female
ENSELUG00000021848	matr3l1.1	76	51.515	ENSSTOG00000014746	-	73	49.123	Ictidomys_tridecemlineatus
ENSELUG00000021848	matr3l1.1	75	51.515	ENSJJAG00000021710	-	94	30.243	Jaculus_jaculus
ENSELUG00000021848	matr3l1.1	75	51.515	ENSMFAG00000000634	-	73	49.123	Macaca_fascicularis
ENSELUG00000021848	matr3l1.1	75	51.515	ENSMMUG00000016741	MATR3	73	49.123	Macaca_mulatta
ENSELUG00000021848	matr3l1.1	63	33.891	ENSMMUG00000015963	-	98	33.891	Macaca_mulatta
ENSELUG00000021848	matr3l1.1	76	51.515	ENSMNEG00000042856	-	94	30.022	Macaca_nemestrina
ENSELUG00000021848	matr3l1.1	76	51.515	ENSMLEG00000041178	-	94	30.022	Mandrillus_leucophaeus
ENSELUG00000021848	matr3l1.1	98	35.185	ENSMGAG00000001331	-	96	34.296	Meleagris_gallopavo
ENSELUG00000021848	matr3l1.1	75	51.515	ENSMAUG00000011647	Matr3	86	36.471	Mesocricetus_auratus
ENSELUG00000021848	matr3l1.1	55	50.000	ENSMICG00000012438	-	97	30.396	Microcebus_murinus
ENSELUG00000021848	matr3l1.1	59	58.491	ENSMOCG00000015711	Matr3	94	30.617	Microtus_ochrogaster
ENSELUG00000021848	matr3l1.1	76	52.459	ENSMODG00000011925	-	86	30.739	Monodelphis_domestica
ENSELUG00000021848	matr3l1.1	66	51.515	MGP_CAROLIEiJ_G0022108	Matr3	94	30.837	Mus_caroli
ENSELUG00000021848	matr3l1.1	66	51.515	ENSMUSG00000037236	Matr3	86	30.973	Mus_musculus
ENSELUG00000021848	matr3l1.1	73	51.515	MGP_PahariEiJ_G0018842	Matr3	94	30.088	Mus_pahari
ENSELUG00000021848	matr3l1.1	66	53.030	MGP_SPRETEiJ_G0023020	Matr3	94	30.837	Mus_spretus
ENSELUG00000021848	matr3l1.1	74	51.515	ENSMPUG00000009297	-	72	49.123	Mustela_putorius_furo
ENSELUG00000021848	matr3l1.1	77	38.462	ENSMLUG00000005798	-	86	30.219	Myotis_lucifugus
ENSELUG00000021848	matr3l1.1	75	51.515	ENSNGAG00000017452	Matr3	72	49.123	Nannospalax_galili
ENSELUG00000021848	matr3l1.1	76	51.515	ENSNLEG00000009093	-	75	49.123	Nomascus_leucogenys
ENSELUG00000021848	matr3l1.1	76	51.515	ENSOPRG00000016511	-	70	49.123	Ochotona_princeps
ENSELUG00000021848	matr3l1.1	59	58.491	ENSODEG00000003015	-	94	30.088	Octodon_degus
ENSELUG00000021848	matr3l1.1	73	51.515	ENSOCUG00000026311	MATR3	86	30.539	Oryctolagus_cuniculus
ENSELUG00000021848	matr3l1.1	68	45.823	ENSORLG00000025674	matr3l1.1	97	46.460	Oryzias_latipes
ENSELUG00000021848	matr3l1.1	99	48.303	ENSORLG00020009362	matr3l1.1	98	49.563	Oryzias_latipes_hni
ENSELUG00000021848	matr3l1.1	99	48.038	ENSORLG00015018551	matr3l1.1	98	49.298	Oryzias_latipes_hsok
ENSELUG00000021848	matr3l1.1	76	51.515	ENSOGAG00000010607	-	73	49.123	Otolemur_garnettii
ENSELUG00000021848	matr3l1.1	86	51.515	ENSOARG00000016931	-	72	49.123	Ovis_aries
ENSELUG00000021848	matr3l1.1	61	30.958	ENSPPAG00000026720	-	95	30.645	Pan_paniscus
ENSELUG00000021848	matr3l1.1	75	51.515	ENSPPAG00000001418	-	69	49.123	Pan_paniscus
ENSELUG00000021848	matr3l1.1	74	51.515	ENSPPRG00000008004	-	73	49.123	Panthera_pardus
ENSELUG00000021848	matr3l1.1	75	51.515	ENSPTIG00000010711	-	76	49.123	Panthera_tigris_altaica
ENSELUG00000021848	matr3l1.1	75	51.515	ENSPTRG00000017294	MATR3	69	49.123	Pan_troglodytes
ENSELUG00000021848	matr3l1.1	75	51.515	ENSPANG00000012018	-	94	30.022	Papio_anubis
ENSELUG00000021848	matr3l1.1	59	51.515	ENSPANG00000032489	-	75	49.123	Papio_anubis
ENSELUG00000021848	matr3l1.1	99	54.446	ENSPKIG00000000333	matr3l1.1	99	55.137	Paramormyrops_kingsleyae
ENSELUG00000021848	matr3l1.1	93	34.395	ENSPSIG00000014598	-	87	32.601	Pelodiscus_sinensis
ENSELUG00000021848	matr3l1.1	78	51.515	ENSPEMG00000020679	Matr3	86	30.539	Peromyscus_maniculatus_bairdii
ENSELUG00000021848	matr3l1.1	75	51.515	ENSPPYG00000015835	-	69	49.123	Pongo_abelii
ENSELUG00000021848	matr3l1.1	79	30.714	ENSPCOG00000025718	-	86	30.539	Propithecus_coquereli
ENSELUG00000021848	matr3l1.1	74	50.820	ENSPVAG00000015431	-	69	49.123	Pteropus_vampyrus
ENSELUG00000021848	matr3l1.1	57	50.781	ENSPNYG00000015855	-	98	52.128	Pundamilia_nyererei
ENSELUG00000021848	matr3l1.1	73	51.515	ENSRNOG00000019875	Matr3	86	30.539	Rattus_norvegicus
ENSELUG00000021848	matr3l1.1	58	51.515	ENSRBIG00000034713	-	73	49.123	Rhinopithecus_bieti
ENSELUG00000021848	matr3l1.1	74	51.515	ENSRROG00000043949	-	74	49.123	Rhinopithecus_roxellana
ENSELUG00000021848	matr3l1.1	74	51.515	ENSRROG00000039415	-	77	49.123	Rhinopithecus_roxellana
ENSELUG00000021848	matr3l1.1	75	51.515	ENSSBOG00000030159	-	86	36.471	Saimiri_boliviensis_boliviensis
ENSELUG00000021848	matr3l1.1	79	30.998	ENSSHAG00000010331	-	86	30.739	Sarcophilus_harrisii
ENSELUG00000021848	matr3l1.1	89	37.705	ENSSPUG00000019236	-	95	35.398	Sphenodon_punctatus
ENSELUG00000021848	matr3l1.1	74	51.515	ENSSSCG00000014343	-	71	49.123	Sus_scrofa
ENSELUG00000021848	matr3l1.1	81	36.806	ENSTGUG00000014568	MATR3	85	34.815	Taeniopygia_guttata
ENSELUG00000021848	matr3l1.1	61	47.280	ENSTRUG00000001692	-	88	45.583	Takifugu_rubripes
ENSELUG00000021848	matr3l1.1	76	57.746	ENSTNIG00000003166	matr3l1.1	100	48.108	Tetraodon_nigroviridis
ENSELUG00000021848	matr3l1.1	69	32.624	ENSUAMG00000000097	-	76	31.650	Ursus_americanus
ENSELUG00000021848	matr3l1.1	86	51.515	ENSUMAG00000015808	-	73	49.123	Ursus_maritimus
ENSELUG00000021848	matr3l1.1	78	37.607	ENSVPAG00000006337	-	71	36.471	Vicugna_pacos
ENSELUG00000021848	matr3l1.1	88	50.000	ENSVVUG00000020287	-	73	49.123	Vulpes_vulpes
ENSELUG00000021848	matr3l1.1	92	59.615	ENSXETG00000003838	matr3	75	58.333	Xenopus_tropicalis
ENSELUG00000021848	matr3l1.1	63	43.694	ENSXMAG00000014107	-	79	45.274	Xiphophorus_maculatus