EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000022150 (Gene tree)
Gene ID: 105020594
Gene Symbol: rbm4.3 (1 of many)
Alias: fb55c03|fb78a04|fj36h04|wu:fb55c03|wu:fb78a04|wu:fj36h04|zgc:56141|zgc:77000
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 3191 bases
Position: chrLG24:9676936-9680126
Accession: 105020594
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000023284	RRM_5	PF13893.6	5.2e-11	1	2
ENSELUP00000023284	RRM_5	PF13893.6	5.2e-11	2	2
ENSELUP00000023284	RRM_1	PF00076.22	1.3e-26	1	2
ENSELUP00000023284	RRM_1	PF00076.22	1.3e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000034432	-	2368	XM_010887759	ENSELUP00000023284	348 (aa)	XP_010886061	UPI000661DA0F

Gene Model

Click here to download ENSELUG00000022150's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000022150's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000022150	rbm4.3	99	71.023	ENSELUG00000022168	rbm4.3	99	72.650
ENSELUG00000022150	rbm4.3	55	33.766	ENSELUG00000014357	SRSF3	70	33.766
ENSELUG00000022150	rbm4.3	100	94.857	ENSELUG00000022155	rbm4.3	100	94.857
ENSELUG00000022150	rbm4.3	78	50.000	ENSELUG00000013205	rbm4.1	64	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000022150	rbm4.3	97	67.847	ENSAPOG00000002991	rbm4.3	98	67.816	Acanthochromis_polyacanthus
ENSELUG00000022150	rbm4.3	97	72.353	ENSAPOG00000002953	rbm4.3	99	75.429	Acanthochromis_polyacanthus
ENSELUG00000022150	rbm4.3	97	69.501	ENSACIG00000021311	-	99	71.429	Amphilophus_citrinellus
ENSELUG00000022150	rbm4.3	99	67.816	ENSACIG00000021295	rbm4.3	99	69.341	Amphilophus_citrinellus
ENSELUG00000022150	rbm4.3	97	74.336	ENSAOCG00000008015	rbm4.3	99	75.645	Amphiprion_ocellaris
ENSELUG00000022150	rbm4.3	99	66.667	ENSAOCG00000007992	rbm4.3	99	67.045	Amphiprion_ocellaris
ENSELUG00000022150	rbm4.3	99	66.954	ENSAPEG00000017288	rbm4.3	99	67.045	Amphiprion_percula
ENSELUG00000022150	rbm4.3	97	74.631	ENSAPEG00000017324	rbm4.3	99	75.931	Amphiprion_percula
ENSELUG00000022150	rbm4.3	97	76.176	ENSATEG00000019375	rbm4.3	99	76.218	Anabas_testudineus
ENSELUG00000022150	rbm4.3	97	65.294	ENSATEG00000019395	rbm4.3	98	65.714	Anabas_testudineus
ENSELUG00000022150	rbm4.3	99	68.768	ENSACLG00000010620	-	99	71.714	Astatotilapia_calliptera
ENSELUG00000022150	rbm4.3	96	67.359	ENSACLG00000010642	rbm4.3	97	67.529	Astatotilapia_calliptera
ENSELUG00000022150	rbm4.3	55	75.393	ENSAMXG00000040224	rbm4.3	79	75.648	Astyanax_mexicanus
ENSELUG00000022150	rbm4.3	99	70.286	ENSCSEG00000013659	rbm4.3	99	71.510	Cynoglossus_semilaevis
ENSELUG00000022150	rbm4.3	99	63.401	ENSCVAG00000008502	rbm4.3	98	65.819	Cyprinodon_variegatus
ENSELUG00000022150	rbm4.3	97	70.058	ENSCVAG00000008508	rbm4.3	99	71.714	Cyprinodon_variegatus
ENSELUG00000022150	rbm4.3	95	68.060	ENSDARG00000022129	rbm4.3	100	71.225	Danio_rerio
ENSELUG00000022150	rbm4.3	81	70.213	ENSFHEG00000023137	rbm4.3	87	72.792	Fundulus_heteroclitus
ENSELUG00000022150	rbm4.3	97	61.047	ENSGAFG00000001935	rbm4.3	99	63.585	Gambusia_affinis
ENSELUG00000022150	rbm4.3	97	65.015	ENSGACG00000019980	rbm4.3	99	65.730	Gasterosteus_aculeatus
ENSELUG00000022150	rbm4.3	99	68.768	ENSHBUG00000009020	-	99	71.714	Haplochromis_burtoni
ENSELUG00000022150	rbm4.3	97	66.962	ENSHBUG00000009051	rbm4.3	97	68.103	Haplochromis_burtoni
ENSELUG00000022150	rbm4.3	95	66.071	ENSHCOG00000010349	rbm4.3	99	67.422	Hippocampus_comes
ENSELUG00000022150	rbm4.3	99	66.097	ENSIPUG00000022943	RBM4B	99	67.521	Ictalurus_punctatus
ENSELUG00000022150	rbm4.3	96	61.493	ENSKMAG00000014541	rbm4.3	97	63.897	Kryptolebias_marmoratus
ENSELUG00000022150	rbm4.3	99	62.535	ENSKMAG00000017468	rbm4.3	99	65.722	Kryptolebias_marmoratus
ENSELUG00000022150	rbm4.3	97	72.353	ENSLBEG00000001071	-	99	73.714	Labrus_bergylta
ENSELUG00000022150	rbm4.3	54	68.750	ENSLBEG00000001025	rbm4.3	85	68.750	Labrus_bergylta
ENSELUG00000022150	rbm4.3	95	61.413	ENSLOCG00000002755	rbm4.3	99	62.663	Lepisosteus_oculatus
ENSELUG00000022150	rbm4.3	97	76.176	ENSMAMG00000004715	-	83	76.218	Mastacembelus_armatus
ENSELUG00000022150	rbm4.3	97	66.372	ENSMAMG00000004701	rbm4.3	98	67.816	Mastacembelus_armatus
ENSELUG00000022150	rbm4.3	96	67.359	ENSMZEG00005028540	rbm4.3	97	67.529	Maylandia_zebra
ENSELUG00000022150	rbm4.3	86	67.000	ENSMZEG00005007441	rbm4.3	78	67.450	Maylandia_zebra
ENSELUG00000022150	rbm4.3	97	64.706	ENSMZEG00005007417	-	99	68.000	Maylandia_zebra
ENSELUG00000022150	rbm4.3	85	63.973	ENSMZEG00005028537	-	81	67.347	Maylandia_zebra
ENSELUG00000022150	rbm4.3	97	66.959	ENSMMOG00000012191	rbm4.3	99	67.139	Mola_mola
ENSELUG00000022150	rbm4.3	85	76.254	ENSMALG00000003001	rbm4.3	86	76.190	Monopterus_albus
ENSELUG00000022150	rbm4.3	97	64.095	ENSMALG00000015014	-	98	61.782	Monopterus_albus
ENSELUG00000022150	rbm4.3	99	61.236	ENSMALG00000003032	rbm4.3	95	62.422	Monopterus_albus
ENSELUG00000022150	rbm4.3	97	66.471	ENSNBRG00000012372	rbm4.3	97	67.529	Neolamprologus_brichardi
ENSELUG00000022150	rbm4.3	97	66.472	ENSONIG00000018378	rbm4.3	97	67.529	Oreochromis_niloticus
ENSELUG00000022150	rbm4.3	99	68.768	ENSONIG00000018380	-	99	71.714	Oreochromis_niloticus
ENSELUG00000022150	rbm4.3	97	60.588	ENSORLG00000024749	rbm4.3	97	59.366	Oryzias_latipes
ENSELUG00000022150	rbm4.3	97	64.000	ENSORLG00000012473	rbm4.3	99	66.111	Oryzias_latipes
ENSELUG00000022150	rbm4.3	97	65.429	ENSORLG00000011589	rbm4.3	99	67.500	Oryzias_latipes
ENSELUG00000022150	rbm4.3	97	65.143	ENSORLG00020012474	rbm4.3	99	67.222	Oryzias_latipes_hni
ENSELUG00000022150	rbm4.3	99	60.694	ENSORLG00020012482	rbm4.3	98	59.195	Oryzias_latipes_hni
ENSELUG00000022150	rbm4.3	97	64.000	ENSORLG00020012464	rbm4.3	99	66.111	Oryzias_latipes_hni
ENSELUG00000022150	rbm4.3	97	64.286	ENSORLG00015013686	rbm4.3	99	66.389	Oryzias_latipes_hsok
ENSELUG00000022150	rbm4.3	99	60.745	ENSORLG00015013721	rbm4.3	99	59.259	Oryzias_latipes_hsok
ENSELUG00000022150	rbm4.3	97	64.857	ENSORLG00015013698	rbm4.3	99	68.056	Oryzias_latipes_hsok
ENSELUG00000022150	rbm4.3	99	64.266	ENSOMEG00000005918	rbm4.3	99	67.500	Oryzias_melastigma
ENSELUG00000022150	rbm4.3	97	64.387	ENSOMEG00000005929	rbm4.3	99	67.867	Oryzias_melastigma
ENSELUG00000022150	rbm4.3	97	61.062	ENSOMEG00000005950	rbm4.3	99	63.533	Oryzias_melastigma
ENSELUG00000022150	rbm4.3	94	67.568	ENSPKIG00000007001	rbm4.3	99	65.143	Paramormyrops_kingsleyae
ENSELUG00000022150	rbm4.3	99	67.139	ENSPLAG00000006131	rbm4.3	99	68.644	Poecilia_latipinna
ENSELUG00000022150	rbm4.3	96	64.431	ENSPLAG00000006077	rbm4.3	98	65.341	Poecilia_latipinna
ENSELUG00000022150	rbm4.3	96	64.620	ENSPMEG00000024260	rbm4.3	98	65.527	Poecilia_mexicana
ENSELUG00000022150	rbm4.3	97	68.605	ENSPMEG00000024263	rbm4.3	99	70.339	Poecilia_mexicana
ENSELUG00000022150	rbm4.3	99	67.422	ENSPMEG00000024271	rbm4.3	99	68.927	Poecilia_mexicana
ENSELUG00000022150	rbm4.3	99	66.476	ENSPREG00000002156	rbm4.3	99	65.070	Poecilia_reticulata
ENSELUG00000022150	rbm4.3	99	64.103	ENSPREG00000002093	-	99	65.909	Poecilia_reticulata
ENSELUG00000022150	rbm4.3	99	68.768	ENSPNYG00000018541	rbm4.3	99	71.714	Pundamilia_nyererei
ENSELUG00000022150	rbm4.3	97	66.176	ENSPNYG00000018564	rbm4.3	97	66.957	Pundamilia_nyererei
ENSELUG00000022150	rbm4.3	99	66.667	ENSPNAG00000013053	rbm4.3	99	68.627	Pygocentrus_nattereri
ENSELUG00000022150	rbm4.3	99	65.014	ENSSFOG00015015563	rbm4.3	99	65.110	Scleropages_formosus
ENSELUG00000022150	rbm4.3	97	73.451	ENSSMAG00000013644	rbm4.3	99	74.785	Scophthalmus_maximus
ENSELUG00000022150	rbm4.3	97	64.497	ENSSMAG00000013653	rbm4.3	99	63.277	Scophthalmus_maximus
ENSELUG00000022150	rbm4.3	97	76.176	ENSSDUG00000018435	rbm4.3	99	76.218	Seriola_dumerili
ENSELUG00000022150	rbm4.3	99	66.952	ENSSDUG00000018422	rbm4.3	99	66.097	Seriola_dumerili
ENSELUG00000022150	rbm4.3	99	66.382	ENSSLDG00000017182	rbm4.3	99	65.812	Seriola_lalandi_dorsalis
ENSELUG00000022150	rbm4.3	97	76.176	ENSSLDG00000017204	rbm4.3	99	76.218	Seriola_lalandi_dorsalis
ENSELUG00000022150	rbm4.3	97	68.047	ENSSPAG00000008041	rbm4.3	84	66.856	Stegastes_partitus
ENSELUG00000022150	rbm4.3	99	73.276	ENSSPAG00000008062	rbm4.3	99	74.499	Stegastes_partitus
ENSELUG00000022150	rbm4.3	99	72.365	ENSTRUG00000020901	rbm4.3	99	72.650	Takifugu_rubripes
ENSELUG00000022150	rbm4.3	97	62.941	ENSTRUG00000023874	rbm4.3	99	66.856	Takifugu_rubripes
ENSELUG00000022150	rbm4.3	99	70.487	ENSTNIG00000005668	rbm4.3	99	70.201	Tetraodon_nigroviridis
ENSELUG00000022150	rbm4.3	96	64.307	ENSXCOG00000005996	rbm4.3	99	66.573	Xiphophorus_couchianus
ENSELUG00000022150	rbm4.3	97	68.605	ENSXCOG00000006001	rbm4.3	99	70.339	Xiphophorus_couchianus
ENSELUG00000022150	rbm4.3	96	64.223	ENSXMAG00000025173	rbm4.3	97	66.954	Xiphophorus_maculatus
ENSELUG00000022150	rbm4.3	97	68.605	ENSXMAG00000021997	rbm4.3	99	70.339	Xiphophorus_maculatus
ENSELUG00000022150	rbm4.3	99	67.989	ENSXMAG00000011698	rbm4.3	99	69.492	Xiphophorus_maculatus