EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000022168 (Gene tree)
Gene ID: 105020592
Gene Symbol: rbm4.3 (1 of many)
Alias: fb55c03|fb78a04|fj36h04|wu:fb55c03|wu:fb78a04|wu:fj36h04|zgc:56141|zgc:77000
Full Name: RNA-binding protein 4.1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 5129 bases
Position: chrLG24:9653256-9658384
Accession: 105020592
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000041349	RRM_5	PF13893.6	7.2e-11	1	2
ENSELUP00000041349	RRM_5	PF13893.6	7.2e-11	2	2
ENSELUP00000041353	RRM_5	PF13893.6	7.2e-11	1	2
ENSELUP00000041353	RRM_5	PF13893.6	7.2e-11	2	2
ENSELUP00000041349	RRM_1	PF00076.22	1.2e-26	1	2
ENSELUP00000041349	RRM_1	PF00076.22	1.2e-26	2	2
ENSELUP00000041353	RRM_1	PF00076.22	1.2e-26	1	2
ENSELUP00000041353	RRM_1	PF00076.22	1.2e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000042643	-	1153	-	ENSELUP00000041349	344 (aa)	-	UPI00057745FD
ENSELUT00000034510	-	3867	XM_020043302	ENSELUP00000041353	344 (aa)	XP_019898861	UPI00057745FD

Gene Model

Click here to download ENSELUG00000022168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000022168's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000022168	rbm4.3	99	73.789	ENSELUG00000022155	rbm4.3	99	73.295
ENSELUG00000022168	rbm4.3	99	72.650	ENSELUG00000022150	rbm4.3	99	71.023

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000022168	rbm4.3	100	70.940	ENSAPOG00000002953	rbm4.3	100	71.186	Acanthochromis_polyacanthus
ENSELUG00000022168	rbm4.3	97	70.958	ENSAPOG00000002991	rbm4.3	98	72.647	Acanthochromis_polyacanthus
ENSELUG00000022168	rbm4.3	97	70.414	ENSACIG00000021295	rbm4.3	98	69.971	Amphilophus_citrinellus
ENSELUG00000022168	rbm4.3	100	68.839	ENSACIG00000021311	-	100	67.514	Amphilophus_citrinellus
ENSELUG00000022168	rbm4.3	100	71.714	ENSAOCG00000008015	rbm4.3	100	72.238	Amphiprion_ocellaris
ENSELUG00000022168	rbm4.3	97	70.958	ENSAOCG00000007992	rbm4.3	98	69.341	Amphiprion_ocellaris
ENSELUG00000022168	rbm4.3	97	70.958	ENSAPEG00000017288	rbm4.3	98	69.341	Amphiprion_percula
ENSELUG00000022168	rbm4.3	100	73.352	ENSAPEG00000017324	rbm4.3	100	73.295	Amphiprion_percula
ENSELUG00000022168	rbm4.3	97	69.733	ENSATEG00000019395	rbm4.3	99	66.282	Anabas_testudineus
ENSELUG00000022168	rbm4.3	100	72.159	ENSATEG00000019375	rbm4.3	100	71.671	Anabas_testudineus
ENSELUG00000022168	rbm4.3	97	71.217	ENSACLG00000010642	rbm4.3	97	69.591	Astatotilapia_calliptera
ENSELUG00000022168	rbm4.3	100	68.661	ENSACLG00000010620	-	100	67.614	Astatotilapia_calliptera
ENSELUG00000022168	rbm4.3	60	77.143	ENSAMXG00000040224	rbm4.3	85	75.238	Astyanax_mexicanus
ENSELUG00000022168	rbm4.3	100	65.812	ENSCSEG00000013659	rbm4.3	100	64.689	Cynoglossus_semilaevis
ENSELUG00000022168	rbm4.3	99	64.756	ENSCVAG00000008502	rbm4.3	99	68.571	Cyprinodon_variegatus
ENSELUG00000022168	rbm4.3	100	65.156	ENSCVAG00000008508	rbm4.3	100	63.380	Cyprinodon_variegatus
ENSELUG00000022168	rbm4.3	95	66.862	ENSDARG00000022129	rbm4.3	99	67.887	Danio_rerio
ENSELUG00000022168	rbm4.3	81	67.260	ENSFHEG00000023137	rbm4.3	86	67.742	Fundulus_heteroclitus
ENSELUG00000022168	rbm4.3	64	75.455	ENSGMOG00000004032	rbm4.3	63	74.545	Gadus_morhua
ENSELUG00000022168	rbm4.3	100	65.714	ENSGAFG00000001935	rbm4.3	100	62.571	Gambusia_affinis
ENSELUG00000022168	rbm4.3	94	81.283	ENSGACG00000019980	rbm4.3	99	66.952	Gasterosteus_aculeatus
ENSELUG00000022168	rbm4.3	97	71.810	ENSHBUG00000009051	rbm4.3	97	70.175	Haplochromis_burtoni
ENSELUG00000022168	rbm4.3	100	68.661	ENSHBUG00000009020	-	100	67.614	Haplochromis_burtoni
ENSELUG00000022168	rbm4.3	95	64.095	ENSHCOG00000010349	rbm4.3	100	63.202	Hippocampus_comes
ENSELUG00000022168	rbm4.3	100	68.451	ENSIPUG00000022943	RBM4B	100	66.197	Ictalurus_punctatus
ENSELUG00000022168	rbm4.3	100	63.143	ENSKMAG00000017468	rbm4.3	100	60.563	Kryptolebias_marmoratus
ENSELUG00000022168	rbm4.3	100	69.801	ENSLBEG00000001071	-	100	70.339	Labrus_bergylta
ENSELUG00000022168	rbm4.3	55	76.316	ENSLBEG00000001025	rbm4.3	85	75.401	Labrus_bergylta
ENSELUG00000022168	rbm4.3	95	59.239	ENSLOCG00000002755	rbm4.3	100	59.530	Lepisosteus_oculatus
ENSELUG00000022168	rbm4.3	97	69.048	ENSMAMG00000004701	rbm4.3	99	68.012	Mastacembelus_armatus
ENSELUG00000022168	rbm4.3	100	71.875	ENSMAMG00000004715	-	84	71.671	Mastacembelus_armatus
ENSELUG00000022168	rbm4.3	86	71.717	ENSMZEG00005007441	rbm4.3	74	72.563	Maylandia_zebra
ENSELUG00000022168	rbm4.3	100	64.672	ENSMZEG00005007417	-	100	63.636	Maylandia_zebra
ENSELUG00000022168	rbm4.3	97	71.217	ENSMZEG00005028540	rbm4.3	97	69.591	Maylandia_zebra
ENSELUG00000022168	rbm4.3	85	62.876	ENSMZEG00005028537	-	77	63.571	Maylandia_zebra
ENSELUG00000022168	rbm4.3	97	68.235	ENSMMOG00000012191	rbm4.3	99	65.714	Mola_mola
ENSELUG00000022168	rbm4.3	85	70.667	ENSMALG00000003001	rbm4.3	81	73.050	Monopterus_albus
ENSELUG00000022168	rbm4.3	95	66.159	ENSMALG00000003032	rbm4.3	82	67.025	Monopterus_albus
ENSELUG00000022168	rbm4.3	97	67.164	ENSMALG00000015014	-	98	63.478	Monopterus_albus
ENSELUG00000022168	rbm4.3	97	71.217	ENSNBRG00000012372	rbm4.3	97	69.591	Neolamprologus_brichardi
ENSELUG00000022168	rbm4.3	97	69.501	ENSONIG00000018378	rbm4.3	97	67.919	Oreochromis_niloticus
ENSELUG00000022168	rbm4.3	100	68.661	ENSONIG00000018380	-	100	67.614	Oreochromis_niloticus
ENSELUG00000022168	rbm4.3	97	62.059	ENSORLG00000024749	rbm4.3	97	61.877	Oryzias_latipes
ENSELUG00000022168	rbm4.3	100	60.331	ENSORLG00000012473	rbm4.3	100	57.300	Oryzias_latipes
ENSELUG00000022168	rbm4.3	100	60.882	ENSORLG00000011589	rbm4.3	100	57.300	Oryzias_latipes
ENSELUG00000022168	rbm4.3	100	60.606	ENSORLG00020012474	rbm4.3	100	57.300	Oryzias_latipes_hni
ENSELUG00000022168	rbm4.3	99	62.464	ENSORLG00020012482	rbm4.3	99	61.739	Oryzias_latipes_hni
ENSELUG00000022168	rbm4.3	100	60.331	ENSORLG00020012464	rbm4.3	100	57.300	Oryzias_latipes_hni
ENSELUG00000022168	rbm4.3	100	60.331	ENSORLG00015013686	rbm4.3	100	57.300	Oryzias_latipes_hsok
ENSELUG00000022168	rbm4.3	100	59.504	ENSORLG00015013698	rbm4.3	100	57.576	Oryzias_latipes_hsok
ENSELUG00000022168	rbm4.3	97	62.059	ENSORLG00015013721	rbm4.3	99	61.850	Oryzias_latipes_hsok
ENSELUG00000022168	rbm4.3	100	59.504	ENSOMEG00000005918	rbm4.3	100	56.831	Oryzias_melastigma
ENSELUG00000022168	rbm4.3	97	58.807	ENSOMEG00000005929	rbm4.3	100	57.143	Oryzias_melastigma
ENSELUG00000022168	rbm4.3	97	63.717	ENSOMEG00000005950	rbm4.3	98	65.889	Oryzias_melastigma
ENSELUG00000022168	rbm4.3	94	69.436	ENSPKIG00000007001	rbm4.3	100	66.384	Paramormyrops_kingsleyae
ENSELUG00000022168	rbm4.3	99	64.804	ENSPLAG00000006077	rbm4.3	99	64.306	Poecilia_latipinna
ENSELUG00000022168	rbm4.3	100	65.156	ENSPLAG00000006131	rbm4.3	100	64.888	Poecilia_latipinna
ENSELUG00000022168	rbm4.3	100	64.326	ENSPMEG00000024271	rbm4.3	100	64.067	Poecilia_mexicana
ENSELUG00000022168	rbm4.3	100	66.289	ENSPMEG00000024263	rbm4.3	100	66.011	Poecilia_mexicana
ENSELUG00000022168	rbm4.3	99	64.986	ENSPMEG00000024260	rbm4.3	99	63.483	Poecilia_mexicana
ENSELUG00000022168	rbm4.3	100	62.931	ENSPREG00000002156	rbm4.3	100	63.897	Poecilia_reticulata
ENSELUG00000022168	rbm4.3	99	66.006	ENSPREG00000002093	-	99	65.341	Poecilia_reticulata
ENSELUG00000022168	rbm4.3	100	68.661	ENSPNYG00000018541	rbm4.3	100	67.614	Pundamilia_nyererei
ENSELUG00000022168	rbm4.3	97	70.414	ENSPNYG00000018564	rbm4.3	97	68.805	Pundamilia_nyererei
ENSELUG00000022168	rbm4.3	100	67.857	ENSPNAG00000013053	rbm4.3	100	67.945	Pygocentrus_nattereri
ENSELUG00000022168	rbm4.3	100	64.850	ENSSFOG00015015563	rbm4.3	100	63.043	Scleropages_formosus
ENSELUG00000022168	rbm4.3	100	70.000	ENSSMAG00000013644	rbm4.3	100	69.405	Scophthalmus_maximus
ENSELUG00000022168	rbm4.3	97	66.864	ENSSMAG00000013653	rbm4.3	99	63.506	Scophthalmus_maximus
ENSELUG00000022168	rbm4.3	100	71.023	ENSSDUG00000018435	rbm4.3	100	70.822	Seriola_dumerili
ENSELUG00000022168	rbm4.3	97	71.302	ENSSDUG00000018422	rbm4.3	98	68.222	Seriola_dumerili
ENSELUG00000022168	rbm4.3	100	71.023	ENSSLDG00000017204	rbm4.3	100	70.822	Seriola_lalandi_dorsalis
ENSELUG00000022168	rbm4.3	97	70.118	ENSSLDG00000017182	rbm4.3	98	67.055	Seriola_lalandi_dorsalis
ENSELUG00000022168	rbm4.3	100	70.857	ENSSPAG00000008062	rbm4.3	100	70.822	Stegastes_partitus
ENSELUG00000022168	rbm4.3	97	71.386	ENSSPAG00000008041	rbm4.3	85	72.464	Stegastes_partitus
ENSELUG00000022168	rbm4.3	100	68.644	ENSTRUG00000020901	rbm4.3	100	68.451	Takifugu_rubripes
ENSELUG00000022168	rbm4.3	97	68.343	ENSTRUG00000023874	rbm4.3	99	66.571	Takifugu_rubripes
ENSELUG00000022168	rbm4.3	100	67.236	ENSTNIG00000005668	rbm4.3	100	67.521	Tetraodon_nigroviridis
ENSELUG00000022168	rbm4.3	100	65.722	ENSXCOG00000006001	rbm4.3	100	65.449	Xiphophorus_couchianus
ENSELUG00000022168	rbm4.3	97	65.396	ENSXCOG00000005996	rbm4.3	100	65.156	Xiphophorus_couchianus
ENSELUG00000022168	rbm4.3	100	64.326	ENSXMAG00000011698	rbm4.3	100	64.345	Xiphophorus_maculatus
ENSELUG00000022168	rbm4.3	97	65.015	ENSXMAG00000025173	rbm4.3	99	65.242	Xiphophorus_maculatus
ENSELUG00000022168	rbm4.3	100	65.722	ENSXMAG00000021997	rbm4.3	100	65.449	Xiphophorus_maculatus