EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000022190 (Gene tree)
Gene ID: 105022197
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 13998 bases
Position: chrLG19:20285974-20299971
Accession: 105022197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000041352	PRP4	PF08799.11	3.4e-11	1	1
ENSELUP00000023314	PRP4	PF08799.11	3.5e-11	1	1
ENSELUP00000041352	Prp18	PF02840.15	7.2e-62	1	1
ENSELUP00000023314	Prp18	PF02840.15	7.6e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000034494	-	5313	XM_010890411	ENSELUP00000041352	343 (aa)	XP_010888713	UPI000576D660
ENSELUT00000034459	-	5340	XM_010890410	ENSELUP00000023314	352 (aa)	XP_010888712	UPI0005760446

Gene Model

Click here to download ENSELUG00000022190's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000022190's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000022190	prpf18	100	82.507	ENSG00000165630	PRPF18	100	82.507	Homo_sapiens
ENSELUG00000022190	prpf18	100	89.504	ENSAPOG00000024177	prpf18	100	89.504	Acanthochromis_polyacanthus
ENSELUG00000022190	prpf18	100	81.924	ENSAMEG00000013591	-	100	81.924	Ailuropoda_melanoleuca
ENSELUG00000022190	prpf18	100	89.213	ENSACIG00000001186	prpf18	100	89.213	Amphilophus_citrinellus
ENSELUG00000022190	prpf18	98	88.988	ENSAOCG00000006572	prpf18	94	88.663	Amphiprion_ocellaris
ENSELUG00000022190	prpf18	100	89.213	ENSAPEG00000004564	prpf18	100	89.213	Amphiprion_percula
ENSELUG00000022190	prpf18	100	88.338	ENSATEG00000000303	prpf18	100	88.338	Anabas_testudineus
ENSELUG00000022190	prpf18	99	80.645	ENSAPLG00000003387	-	99	80.645	Anas_platyrhynchos
ENSELUG00000022190	prpf18	100	82.029	ENSACAG00000000818	-	100	82.029	Anolis_carolinensis
ENSELUG00000022190	prpf18	100	82.216	ENSANAG00000037445	-	100	82.216	Aotus_nancymaae
ENSELUG00000022190	prpf18	100	88.047	ENSACLG00000026296	prpf18	100	88.047	Astatotilapia_calliptera
ENSELUG00000022190	prpf18	100	88.636	ENSAMXG00000012848	prpf18	100	88.636	Astyanax_mexicanus
ENSELUG00000022190	prpf18	100	81.924	ENSBTAG00000017244	PRPF18	100	81.924	Bos_taurus
ENSELUG00000022190	prpf18	98	38.527	WBGene00009320	F32B6.3	97	38.527	Caenorhabditis_elegans
ENSELUG00000022190	prpf18	100	82.216	ENSCJAG00000009432	-	100	82.216	Callithrix_jacchus
ENSELUG00000022190	prpf18	100	81.924	ENSCAFG00000004735	-	100	81.924	Canis_familiaris
ENSELUG00000022190	prpf18	100	81.924	ENSCAFG00020007712	-	100	81.924	Canis_lupus_dingo
ENSELUG00000022190	prpf18	100	81.924	ENSCHIG00000000499	-	100	81.924	Capra_hircus
ENSELUG00000022190	prpf18	100	81.633	ENSTSYG00000003517	-	100	81.633	Carlito_syrichta
ENSELUG00000022190	prpf18	100	82.507	ENSCPOG00000021069	-	100	82.507	Cavia_porcellus
ENSELUG00000022190	prpf18	100	82.216	ENSCCAG00000036822	-	100	82.216	Cebus_capucinus
ENSELUG00000022190	prpf18	100	72.886	ENSCATG00000016633	-	100	72.886	Cercocebus_atys
ENSELUG00000022190	prpf18	100	82.216	ENSCLAG00000011770	-	100	82.216	Chinchilla_lanigera
ENSELUG00000022190	prpf18	100	80.966	ENSCSAG00000013109	-	100	80.966	Chlorocebus_sabaeus
ENSELUG00000022190	prpf18	100	78.992	ENSCPBG00000003100	-	100	79.552	Chrysemys_picta_bellii
ENSELUG00000022190	prpf18	99	56.936	ENSCING00000020481	-	97	56.936	Ciona_intestinalis
ENSELUG00000022190	prpf18	99	56.232	ENSCSAVG00000010546	-	99	56.232	Ciona_savignyi
ENSELUG00000022190	prpf18	100	82.507	ENSCANG00000034900	-	100	82.507	Colobus_angolensis_palliatus
ENSELUG00000022190	prpf18	100	82.216	ENSCGRG00001023665	Prpf18	100	82.216	Cricetulus_griseus_chok1gshd
ENSELUG00000022190	prpf18	100	82.216	ENSCGRG00000014690	Prpf18	100	82.216	Cricetulus_griseus_crigri
ENSELUG00000022190	prpf18	100	87.464	ENSCSEG00000005536	prpf18	99	87.464	Cynoglossus_semilaevis
ENSELUG00000022190	prpf18	100	87.172	ENSCVAG00000012401	prpf18	100	87.172	Cyprinodon_variegatus
ENSELUG00000022190	prpf18	100	88.047	ENSDARG00000058306	prpf18	100	88.047	Danio_rerio
ENSELUG00000022190	prpf18	100	82.216	ENSDNOG00000035607	-	100	82.216	Dasypus_novemcinctus
ENSELUG00000022190	prpf18	100	81.633	ENSDORG00000000858	Prpf18	100	81.633	Dipodomys_ordii
ENSELUG00000022190	prpf18	99	53.235	FBgn0027784	Prp18	98	53.235	Drosophila_melanogaster
ENSELUG00000022190	prpf18	100	73.469	ENSETEG00000015060	-	100	73.469	Echinops_telfairi
ENSELUG00000022190	prpf18	100	68.481	ENSEBUG00000016502	prpf18	99	68.481	Eptatretus_burgeri
ENSELUG00000022190	prpf18	100	82.216	ENSEASG00005019373	-	100	82.216	Equus_asinus_asinus
ENSELUG00000022190	prpf18	100	82.216	ENSECAG00000006997	PRPF18	100	82.216	Equus_caballus
ENSELUG00000022190	prpf18	92	49.527	ENSEEUG00000001171	-	100	49.527	Erinaceus_europaeus
ENSELUG00000022190	prpf18	100	81.924	ENSFCAG00000004436	-	100	81.924	Felis_catus
ENSELUG00000022190	prpf18	93	78.221	ENSFALG00000001912	-	97	78.221	Ficedula_albicollis
ENSELUG00000022190	prpf18	99	55.491	ENSFDAG00000010713	-	97	55.491	Fukomys_damarensis
ENSELUG00000022190	prpf18	94	84.112	ENSFDAG00000014026	-	100	84.112	Fukomys_damarensis
ENSELUG00000022190	prpf18	80	89.781	ENSFHEG00000020125	prpf18	100	89.781	Fundulus_heteroclitus
ENSELUG00000022190	prpf18	99	87.427	ENSGMOG00000012210	prpf18	99	87.427	Gadus_morhua
ENSELUG00000022190	prpf18	100	81.633	ENSGALG00000043593	-	100	81.633	Gallus_gallus
ENSELUG00000022190	prpf18	100	87.464	ENSGAFG00000006034	prpf18	100	87.464	Gambusia_affinis
ENSELUG00000022190	prpf18	100	88.630	ENSGACG00000012232	prpf18	100	88.630	Gasterosteus_aculeatus
ENSELUG00000022190	prpf18	100	82.216	ENSGAGG00000016878	-	100	82.216	Gopherus_agassizii
ENSELUG00000022190	prpf18	92	81.388	ENSGGOG00000025188	-	96	81.388	Gorilla_gorilla
ENSELUG00000022190	prpf18	100	88.047	ENSHBUG00000010264	prpf18	100	88.047	Haplochromis_burtoni
ENSELUG00000022190	prpf18	100	81.924	ENSHGLG00000018534	PRPF18	100	81.924	Heterocephalus_glaber_female
ENSELUG00000022190	prpf18	94	83.801	ENSHGLG00100012161	-	98	83.801	Heterocephalus_glaber_male
ENSELUG00000022190	prpf18	100	88.630	ENSHCOG00000015987	prpf18	100	88.630	Hippocampus_comes
ENSELUG00000022190	prpf18	100	83.616	ENSIPUG00000007432	prpf18	100	83.898	Ictalurus_punctatus
ENSELUG00000022190	prpf18	100	81.633	ENSSTOG00000008735	-	100	81.633	Ictidomys_tridecemlineatus
ENSELUG00000022190	prpf18	100	82.507	ENSJJAG00000024041	-	100	82.507	Jaculus_jaculus
ENSELUG00000022190	prpf18	100	62.209	ENSJJAG00000015191	-	100	62.209	Jaculus_jaculus
ENSELUG00000022190	prpf18	100	88.047	ENSKMAG00000012124	prpf18	100	88.047	Kryptolebias_marmoratus
ENSELUG00000022190	prpf18	97	86.228	ENSLBEG00000028466	prpf18	98	86.228	Labrus_bergylta
ENSELUG00000022190	prpf18	100	82.799	ENSLACG00000009885	prpf18	100	82.799	Latimeria_chalumnae
ENSELUG00000022190	prpf18	100	87.172	ENSLOCG00000016736	prpf18	100	87.172	Lepisosteus_oculatus
ENSELUG00000022190	prpf18	100	82.507	ENSLAFG00000007753	-	100	82.507	Loxodonta_africana
ENSELUG00000022190	prpf18	100	82.507	ENSMFAG00000000540	-	100	82.507	Macaca_fascicularis
ENSELUG00000022190	prpf18	100	82.507	ENSMMUG00000015071	PRPF18	93	94.040	Macaca_mulatta
ENSELUG00000022190	prpf18	100	82.507	ENSMNEG00000024679	-	100	82.507	Macaca_nemestrina
ENSELUG00000022190	prpf18	100	67.347	ENSMLEG00000031715	-	100	67.347	Mandrillus_leucophaeus
ENSELUG00000022190	prpf18	100	88.921	ENSMAMG00000006610	prpf18	100	88.921	Mastacembelus_armatus
ENSELUG00000022190	prpf18	100	88.047	ENSMZEG00005019392	prpf18	100	88.047	Maylandia_zebra
ENSELUG00000022190	prpf18	100	81.633	ENSMGAG00000005023	-	100	81.633	Meleagris_gallopavo
ENSELUG00000022190	prpf18	100	82.799	ENSMICG00000006572	-	100	82.799	Microcebus_murinus
ENSELUG00000022190	prpf18	100	82.507	ENSMOCG00000021468	Prpf18	100	82.507	Microtus_ochrogaster
ENSELUG00000022190	prpf18	100	88.338	ENSMMOG00000013012	prpf18	100	88.338	Mola_mola
ENSELUG00000022190	prpf18	99	76.504	ENSMODG00000016902	-	95	76.504	Monodelphis_domestica
ENSELUG00000022190	prpf18	100	76.093	ENSMODG00000024043	-	100	76.093	Monodelphis_domestica
ENSELUG00000022190	prpf18	100	80.692	ENSMALG00000005486	prpf18	100	80.980	Monopterus_albus
ENSELUG00000022190	prpf18	100	81.924	MGP_CAROLIEiJ_G0023143	Prpf18	100	86.486	Mus_caroli
ENSELUG00000022190	prpf18	100	82.216	ENSMUSG00000039449	Prpf18	100	86.486	Mus_musculus
ENSELUG00000022190	prpf18	100	82.216	MGP_PahariEiJ_G0019203	Prpf18	100	86.486	Mus_pahari
ENSELUG00000022190	prpf18	100	81.924	MGP_SPRETEiJ_G0024061	Prpf18	100	86.486	Mus_spretus
ENSELUG00000022190	prpf18	100	81.633	ENSMPUG00000000938	-	100	81.633	Mustela_putorius_furo
ENSELUG00000022190	prpf18	100	81.633	ENSMLUG00000009200	-	100	81.633	Myotis_lucifugus
ENSELUG00000022190	prpf18	100	82.507	ENSNGAG00000012500	-	100	82.507	Nannospalax_galili
ENSELUG00000022190	prpf18	67	81.818	ENSNGAG00000023550	-	83	81.116	Nannospalax_galili
ENSELUG00000022190	prpf18	100	88.047	ENSNBRG00000001778	prpf18	100	88.047	Neolamprologus_brichardi
ENSELUG00000022190	prpf18	100	82.507	ENSNLEG00000012186	-	100	82.507	Nomascus_leucogenys
ENSELUG00000022190	prpf18	100	59.475	ENSMEUG00000005032	-	100	59.475	Notamacropus_eugenii
ENSELUG00000022190	prpf18	78	63.534	ENSOPRG00000002153	-	100	63.534	Ochotona_princeps
ENSELUG00000022190	prpf18	100	82.216	ENSODEG00000003770	-	100	82.216	Octodon_degus
ENSELUG00000022190	prpf18	98	88.095	ENSONIG00000014854	prpf18	96	88.095	Oreochromis_niloticus
ENSELUG00000022190	prpf18	100	83.673	ENSOANG00000015404	-	100	83.673	Ornithorhynchus_anatinus
ENSELUG00000022190	prpf18	100	82.216	ENSOCUG00000027756	-	96	82.927	Oryctolagus_cuniculus
ENSELUG00000022190	prpf18	100	87.216	ENSORLG00000010293	prpf18	100	87.216	Oryzias_latipes
ENSELUG00000022190	prpf18	100	87.216	ENSORLG00020001530	prpf18	100	87.216	Oryzias_latipes_hni
ENSELUG00000022190	prpf18	100	86.932	ENSORLG00015013705	prpf18	100	86.932	Oryzias_latipes_hsok
ENSELUG00000022190	prpf18	100	88.630	ENSOMEG00000009167	prpf18	100	88.630	Oryzias_melastigma
ENSELUG00000022190	prpf18	100	81.633	ENSOGAG00000007294	-	100	81.633	Otolemur_garnettii
ENSELUG00000022190	prpf18	100	80.398	ENSOARG00000006243	-	100	80.398	Ovis_aries
ENSELUG00000022190	prpf18	100	82.507	ENSPPAG00000041959	-	100	82.507	Pan_paniscus
ENSELUG00000022190	prpf18	100	81.924	ENSPPRG00000000107	-	100	81.924	Panthera_pardus
ENSELUG00000022190	prpf18	100	81.924	ENSPTIG00000021094	-	100	81.924	Panthera_tigris_altaica
ENSELUG00000022190	prpf18	100	82.507	ENSPTRG00000002306	PRPF18	100	82.507	Pan_troglodytes
ENSELUG00000022190	prpf18	100	82.216	ENSPANG00000023346	-	100	82.216	Papio_anubis
ENSELUG00000022190	prpf18	100	86.080	ENSPKIG00000014128	prpf18	96	86.080	Paramormyrops_kingsleyae
ENSELUG00000022190	prpf18	100	81.633	ENSPSIG00000016064	-	100	81.633	Pelodiscus_sinensis
ENSELUG00000022190	prpf18	100	80.175	ENSPMGG00000016486	prpf18	100	80.175	Periophthalmus_magnuspinnatus
ENSELUG00000022190	prpf18	100	82.216	ENSPEMG00000013704	Prpf18	100	82.216	Peromyscus_maniculatus_bairdii
ENSELUG00000022190	prpf18	100	72.727	ENSPMAG00000000204	prpf18	100	72.727	Petromyzon_marinus
ENSELUG00000022190	prpf18	92	82.019	ENSPCIG00000012963	-	99	82.019	Phascolarctos_cinereus
ENSELUG00000022190	prpf18	100	86.080	ENSPFOG00000017611	prpf18	100	86.080	Poecilia_formosa
ENSELUG00000022190	prpf18	100	86.589	ENSPLAG00000000369	prpf18	100	86.589	Poecilia_latipinna
ENSELUG00000022190	prpf18	100	86.880	ENSPMEG00000005183	prpf18	100	86.880	Poecilia_mexicana
ENSELUG00000022190	prpf18	100	87.172	ENSPREG00000015232	prpf18	100	87.172	Poecilia_reticulata
ENSELUG00000022190	prpf18	100	82.216	ENSPPYG00000002101	PRPF18	100	82.216	Pongo_abelii
ENSELUG00000022190	prpf18	100	64.431	ENSPCAG00000010833	-	100	64.431	Procavia_capensis
ENSELUG00000022190	prpf18	100	76.968	ENSPCOG00000013057	-	100	76.968	Propithecus_coquereli
ENSELUG00000022190	prpf18	100	50.729	ENSPVAG00000002947	-	100	50.729	Pteropus_vampyrus
ENSELUG00000022190	prpf18	100	88.338	ENSPNYG00000003554	prpf18	100	88.338	Pundamilia_nyererei
ENSELUG00000022190	prpf18	100	88.068	ENSPNAG00000023151	prpf18	100	88.068	Pygocentrus_nattereri
ENSELUG00000022190	prpf18	100	82.507	ENSRNOG00000018396	Prpf18	100	82.507	Rattus_norvegicus
ENSELUG00000022190	prpf18	100	82.799	ENSRBIG00000028028	-	100	82.799	Rhinopithecus_bieti
ENSELUG00000022190	prpf18	100	82.507	ENSRROG00000040695	-	100	82.507	Rhinopithecus_roxellana
ENSELUG00000022190	prpf18	100	82.216	ENSSBOG00000034482	-	100	82.216	Saimiri_boliviensis_boliviensis
ENSELUG00000022190	prpf18	100	69.388	ENSSHAG00000009669	-	100	69.388	Sarcophilus_harrisii
ENSELUG00000022190	prpf18	100	83.382	ENSSHAG00000016463	-	100	83.382	Sarcophilus_harrisii
ENSELUG00000022190	prpf18	78	45.489	ENSSFOG00015021154	-	89	50.000	Scleropages_formosus
ENSELUG00000022190	prpf18	98	84.682	ENSSFOG00015022118	prpf18	100	78.448	Scleropages_formosus
ENSELUG00000022190	prpf18	100	88.630	ENSSMAG00000005308	prpf18	100	88.630	Scophthalmus_maximus
ENSELUG00000022190	prpf18	100	90.379	ENSSDUG00000015428	prpf18	100	90.379	Seriola_dumerili
ENSELUG00000022190	prpf18	100	90.087	ENSSLDG00000023989	prpf18	100	90.087	Seriola_lalandi_dorsalis
ENSELUG00000022190	prpf18	100	54.519	ENSSARG00000005307	-	100	54.519	Sorex_araneus
ENSELUG00000022190	prpf18	100	83.090	ENSSPUG00000002619	-	100	83.090	Sphenodon_punctatus
ENSELUG00000022190	prpf18	100	89.504	ENSSPAG00000019502	prpf18	100	89.504	Stegastes_partitus
ENSELUG00000022190	prpf18	100	81.924	ENSSSCG00000026354	-	100	81.924	Sus_scrofa
ENSELUG00000022190	prpf18	100	81.050	ENSTGUG00000002286	-	100	81.050	Taeniopygia_guttata
ENSELUG00000022190	prpf18	100	86.880	ENSTRUG00000011278	prpf18	100	86.880	Takifugu_rubripes
ENSELUG00000022190	prpf18	100	86.880	ENSTNIG00000000911	prpf18	100	86.880	Tetraodon_nigroviridis
ENSELUG00000022190	prpf18	80	98.718	ENSTBEG00000013011	-	79	98.718	Tupaia_belangeri
ENSELUG00000022190	prpf18	100	82.507	ENSTTRG00000011117	PRPF18	100	82.507	Tursiops_truncatus
ENSELUG00000022190	prpf18	91	84.295	ENSUAMG00000001815	-	93	84.295	Ursus_americanus
ENSELUG00000022190	prpf18	100	77.259	ENSUMAG00000012329	-	100	77.259	Ursus_maritimus
ENSELUG00000022190	prpf18	100	76.385	ENSVPAG00000011486	-	100	76.385	Vicugna_pacos
ENSELUG00000022190	prpf18	100	81.924	ENSVVUG00000005453	-	100	81.924	Vulpes_vulpes
ENSELUG00000022190	prpf18	100	77.233	ENSXETG00000024057	prpf18	100	77.233	Xenopus_tropicalis
ENSELUG00000022190	prpf18	100	86.667	ENSXCOG00000020414	prpf18	100	86.667	Xiphophorus_couchianus
ENSELUG00000022190	prpf18	100	87.464	ENSXMAG00000004713	prpf18	91	87.464	Xiphophorus_maculatus