EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000022228 (Gene tree)
Gene ID: 105022838
Gene Symbol: scrt1a
Alias: sb:eu669|zgc:172288
Full Name: scratch family transcriptional repressor 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 3968 bases
Position: chrLG10:20449446-20453413
Accession: 105022838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000023379	zf-C2H2	PF00096.26	7.5e-25	1	4
ENSELUP00000023379	zf-C2H2	PF00096.26	7.5e-25	2	4
ENSELUP00000023379	zf-C2H2	PF00096.26	7.5e-25	3	4
ENSELUP00000023379	zf-C2H2	PF00096.26	7.5e-25	4	4
ENSELUP00000023379	zf-met	PF12874.7	2.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000042661	-	2968	XM_010891562	ENSELUP00000023379	279 (aa)	XP_010889864	UPI0005764BDD

Gene Model

Click here to download ENSELUG00000022228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000022228's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000022228	scrt1a	50	33.333	ENSELUG00000021560	-	57	37.589
ENSELUG00000022228	scrt1a	50	55.396	ENSELUG00000018742	-	50	55.396
ENSELUG00000022228	scrt1a	99	91.636	ENSELUG00000005435	scrt1b	98	91.636
ENSELUG00000022228	scrt1a	95	40.072	ENSELUG00000021795	SNAI2	78	42.279
ENSELUG00000022228	scrt1a	55	33.929	ENSELUG00000001909	-	76	31.169
ENSELUG00000022228	scrt1a	96	64.548	ENSELUG00000023883	scrt2	96	65.705
ENSELUG00000022228	scrt1a	52	48.387	ENSELUG00000002056	SNAI1	98	35.612
ENSELUG00000022228	scrt1a	58	36.697	ENSELUG00000000281	-	61	36.697

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000022228	scrt1a	96	70.545	ENSAPOG00000003680	scrt2	96	70.545	Acanthochromis_polyacanthus
ENSELUG00000022228	scrt1a	100	77.972	ENSAPOG00000015197	-	100	77.972	Acanthochromis_polyacanthus
ENSELUG00000022228	scrt1a	99	87.500	ENSAPOG00000009279	scrt1b	99	87.500	Acanthochromis_polyacanthus
ENSELUG00000022228	scrt1a	96	69.455	ENSACIG00000012604	scrt2	96	69.455	Amphilophus_citrinellus
ENSELUG00000022228	scrt1a	100	77.333	ENSACIG00000006586	-	100	77.333	Amphilophus_citrinellus
ENSELUG00000022228	scrt1a	99	85.053	ENSACIG00000013613	scrt1b	99	85.053	Amphilophus_citrinellus
ENSELUG00000022228	scrt1a	97	57.475	ENSACIG00000001296	-	97	57.807	Amphilophus_citrinellus
ENSELUG00000022228	scrt1a	96	70.545	ENSAOCG00000021557	scrt2	96	70.545	Amphiprion_ocellaris
ENSELUG00000022228	scrt1a	100	77.667	ENSAOCG00000023304	-	100	77.667	Amphiprion_ocellaris
ENSELUG00000022228	scrt1a	99	87.500	ENSAOCG00000003910	scrt1b	99	87.500	Amphiprion_ocellaris
ENSELUG00000022228	scrt1a	99	87.500	ENSAPEG00000000869	scrt1b	99	87.500	Amphiprion_percula
ENSELUG00000022228	scrt1a	96	70.545	ENSAPEG00000022558	scrt2	96	70.545	Amphiprion_percula
ENSELUG00000022228	scrt1a	100	77.667	ENSAPEG00000005677	-	100	77.667	Amphiprion_percula
ENSELUG00000022228	scrt1a	96	55.380	ENSATEG00000003195	-	97	55.380	Anabas_testudineus
ENSELUG00000022228	scrt1a	100	78.671	ENSATEG00000011660	-	100	78.671	Anabas_testudineus
ENSELUG00000022228	scrt1a	96	66.558	ENSATEG00000023998	scrt2	97	66.558	Anabas_testudineus
ENSELUG00000022228	scrt1a	99	87.857	ENSATEG00000002302	scrt1b	99	87.857	Anabas_testudineus
ENSELUG00000022228	scrt1a	76	76.995	ENSACAG00000016109	SCRT2	95	76.995	Anolis_carolinensis
ENSELUG00000022228	scrt1a	99	87.143	ENSACLG00000007162	scrt1b	99	87.143	Astatotilapia_calliptera
ENSELUG00000022228	scrt1a	100	75.578	ENSACLG00000012046	-	100	75.578	Astatotilapia_calliptera
ENSELUG00000022228	scrt1a	99	86.691	ENSAMXG00000038085	scrt1a	99	86.691	Astyanax_mexicanus
ENSELUG00000022228	scrt1a	87	70.238	ENSAMXG00000034158	scrt2	91	70.238	Astyanax_mexicanus
ENSELUG00000022228	scrt1a	99	81.655	ENSAMXG00000042624	SCRT1	100	81.655	Astyanax_mexicanus
ENSELUG00000022228	scrt1a	58	59.877	WBGene00000468	ces-1	61	58.683	Caenorhabditis_elegans
ENSELUG00000022228	scrt1a	86	63.200	ENSCPBG00000027613	SCRT2	100	63.200	Chrysemys_picta_bellii
ENSELUG00000022228	scrt1a	99	84.532	ENSCPBG00000018899	SCRT1	99	84.532	Chrysemys_picta_bellii
ENSELUG00000022228	scrt1a	88	48.571	ENSCGRG00000001380	Scrt2	100	48.571	Cricetulus_griseus_crigri
ENSELUG00000022228	scrt1a	99	86.786	ENSCSEG00000008596	scrt1b	99	86.786	Cynoglossus_semilaevis
ENSELUG00000022228	scrt1a	96	67.219	ENSCSEG00000021542	scrt2	96	67.219	Cynoglossus_semilaevis
ENSELUG00000022228	scrt1a	99	76.431	ENSCSEG00000014892	-	99	76.431	Cynoglossus_semilaevis
ENSELUG00000022228	scrt1a	100	77.667	ENSCVAG00000003190	-	100	77.667	Cyprinodon_variegatus
ENSELUG00000022228	scrt1a	99	86.429	ENSCVAG00000009561	scrt1b	99	86.429	Cyprinodon_variegatus
ENSELUG00000022228	scrt1a	96	65.584	ENSCVAG00000021038	scrt2	97	65.584	Cyprinodon_variegatus
ENSELUG00000022228	scrt1a	99	92.446	ENSDARG00000100821	scrt1a	99	92.446	Danio_rerio
ENSELUG00000022228	scrt1a	99	89.928	ENSDARG00000040214	scrt1b	99	89.928	Danio_rerio
ENSELUG00000022228	scrt1a	83	71.983	ENSFALG00000005718	SCRT2	96	71.983	Ficedula_albicollis
ENSELUG00000022228	scrt1a	96	60.967	ENSFDAG00000008733	SCRT1	97	60.967	Fukomys_damarensis
ENSELUG00000022228	scrt1a	99	86.786	ENSFHEG00000014820	scrt1b	99	86.786	Fundulus_heteroclitus
ENSELUG00000022228	scrt1a	96	71.273	ENSFHEG00000005732	scrt2	96	71.273	Fundulus_heteroclitus
ENSELUG00000022228	scrt1a	100	76.667	ENSFHEG00000009794	-	100	76.667	Fundulus_heteroclitus
ENSELUG00000022228	scrt1a	99	86.022	ENSGMOG00000000629	scrt1b	99	86.022	Gadus_morhua
ENSELUG00000022228	scrt1a	96	61.688	ENSGMOG00000019519	scrt2	95	61.688	Gadus_morhua
ENSELUG00000022228	scrt1a	58	93.651	ENSGMOG00000013833	-	55	93.651	Gadus_morhua
ENSELUG00000022228	scrt1a	96	65.074	ENSGALG00000028912	SCRT2	97	64.982	Gallus_gallus
ENSELUG00000022228	scrt1a	99	85.305	ENSGAFG00000007636	scrt1b	99	85.305	Gambusia_affinis
ENSELUG00000022228	scrt1a	100	78.246	ENSGAFG00000009650	-	100	78.246	Gambusia_affinis
ENSELUG00000022228	scrt1a	96	66.892	ENSGAFG00000003093	scrt2	96	66.892	Gambusia_affinis
ENSELUG00000022228	scrt1a	99	85.252	ENSGACG00000008982	scrt1b	99	85.252	Gasterosteus_aculeatus
ENSELUG00000022228	scrt1a	100	76.689	ENSGACG00000004072	-	100	76.689	Gasterosteus_aculeatus
ENSELUG00000022228	scrt1a	66	79.235	ENSGAGG00000020760	-	71	79.235	Gopherus_agassizii
ENSELUG00000022228	scrt1a	96	65.683	ENSGAGG00000020761	SCRT2	96	64.855	Gopherus_agassizii
ENSELUG00000022228	scrt1a	99	86.182	ENSGAGG00000011736	SCRT1	99	86.182	Gopherus_agassizii
ENSELUG00000022228	scrt1a	100	77.667	ENSHBUG00000019101	-	100	77.667	Haplochromis_burtoni
ENSELUG00000022228	scrt1a	99	87.143	ENSHBUG00000016621	scrt1b	99	87.143	Haplochromis_burtoni
ENSELUG00000022228	scrt1a	96	69.818	ENSHBUG00000012492	scrt2	96	69.818	Haplochromis_burtoni
ENSELUG00000022228	scrt1a	99	85.714	ENSHCOG00000016704	scrt1b	99	85.714	Hippocampus_comes
ENSELUG00000022228	scrt1a	100	71.575	ENSHCOG00000016179	-	100	71.575	Hippocampus_comes
ENSELUG00000022228	scrt1a	96	67.808	ENSHCOG00000008116	scrt2	96	67.808	Hippocampus_comes
ENSELUG00000022228	scrt1a	98	89.493	ENSIPUG00000004551	scrt1a	99	89.493	Ictalurus_punctatus
ENSELUG00000022228	scrt1a	99	75.362	ENSIPUG00000005547	-	100	75.362	Ictalurus_punctatus
ENSELUG00000022228	scrt1a	51	82.979	ENSSTOG00000032944	SCRT2	80	80.000	Ictidomys_tridecemlineatus
ENSELUG00000022228	scrt1a	100	75.083	ENSKMAG00000009489	-	100	77.076	Kryptolebias_marmoratus
ENSELUG00000022228	scrt1a	96	66.234	ENSKMAG00000018087	scrt2	97	66.234	Kryptolebias_marmoratus
ENSELUG00000022228	scrt1a	99	86.786	ENSKMAG00000005484	scrt1b	99	86.786	Kryptolebias_marmoratus
ENSELUG00000022228	scrt1a	96	66.019	ENSLBEG00000015419	scrt2	97	66.019	Labrus_bergylta
ENSELUG00000022228	scrt1a	100	76.333	ENSLBEG00000023388	-	100	77.000	Labrus_bergylta
ENSELUG00000022228	scrt1a	99	87.410	ENSLACG00000003588	SCRT1	99	87.410	Latimeria_chalumnae
ENSELUG00000022228	scrt1a	96	55.161	ENSLOCG00000002246	scrt2	97	55.806	Lepisosteus_oculatus
ENSELUG00000022228	scrt1a	99	91.727	ENSLOCG00000007573	scrt1b	99	91.727	Lepisosteus_oculatus
ENSELUG00000022228	scrt1a	96	90.370	ENSMFAG00000035496	SCRT1	66	89.362	Macaca_fascicularis
ENSELUG00000022228	scrt1a	96	65.909	ENSMAMG00000001291	scrt2	97	65.909	Mastacembelus_armatus
ENSELUG00000022228	scrt1a	99	86.786	ENSMAMG00000011698	scrt1b	99	86.786	Mastacembelus_armatus
ENSELUG00000022228	scrt1a	99	87.143	ENSMZEG00005005627	scrt1b	99	87.143	Maylandia_zebra
ENSELUG00000022228	scrt1a	96	69.818	ENSMZEG00005026445	scrt2	96	69.818	Maylandia_zebra
ENSELUG00000022228	scrt1a	100	77.667	ENSMZEG00005026702	-	100	77.667	Maylandia_zebra
ENSELUG00000022228	scrt1a	83	70.563	ENSMGAG00000016579	SCRT2	96	70.563	Meleagris_gallopavo
ENSELUG00000022228	scrt1a	96	65.902	ENSMMOG00000009272	scrt2	97	65.902	Mola_mola
ENSELUG00000022228	scrt1a	99	85.714	ENSMMOG00000003327	scrt1b	99	85.714	Mola_mola
ENSELUG00000022228	scrt1a	100	77.667	ENSMMOG00000018345	-	100	77.667	Mola_mola
ENSELUG00000022228	scrt1a	99	87.143	ENSMALG00000012704	scrt1b	99	87.143	Monopterus_albus
ENSELUG00000022228	scrt1a	96	69.065	ENSMALG00000013656	scrt2	96	69.065	Monopterus_albus
ENSELUG00000022228	scrt1a	51	82.979	ENSNGAG00000020815	Scrt2	70	81.379	Nannospalax_galili
ENSELUG00000022228	scrt1a	100	77.333	ENSNBRG00000014882	-	100	77.333	Neolamprologus_brichardi
ENSELUG00000022228	scrt1a	96	69.455	ENSNBRG00000007221	scrt2	96	69.455	Neolamprologus_brichardi
ENSELUG00000022228	scrt1a	99	83.333	ENSNBRG00000013983	scrt1b	99	83.333	Neolamprologus_brichardi
ENSELUG00000022228	scrt1a	96	65.584	ENSONIG00000016758	scrt2	97	65.584	Oreochromis_niloticus
ENSELUG00000022228	scrt1a	96	73.770	ENSONIG00000019809	-	99	73.770	Oreochromis_niloticus
ENSELUG00000022228	scrt1a	97	61.011	ENSONIG00000003152	-	97	61.011	Oreochromis_niloticus
ENSELUG00000022228	scrt1a	99	86.429	ENSONIG00000006007	scrt1b	99	86.429	Oreochromis_niloticus
ENSELUG00000022228	scrt1a	99	86.786	ENSORLG00000025651	scrt1b	99	86.786	Oryzias_latipes
ENSELUG00000022228	scrt1a	96	66.234	ENSORLG00000024051	scrt2	97	66.234	Oryzias_latipes
ENSELUG00000022228	scrt1a	100	75.497	ENSORLG00000022825	-	100	75.497	Oryzias_latipes
ENSELUG00000022228	scrt1a	96	66.234	ENSORLG00020011478	scrt2	97	66.234	Oryzias_latipes_hni
ENSELUG00000022228	scrt1a	99	86.786	ENSORLG00020012967	scrt1b	99	86.786	Oryzias_latipes_hni
ENSELUG00000022228	scrt1a	100	75.166	ENSORLG00015010104	-	100	75.166	Oryzias_latipes_hsok
ENSELUG00000022228	scrt1a	96	66.234	ENSORLG00015005524	scrt2	97	66.234	Oryzias_latipes_hsok
ENSELUG00000022228	scrt1a	99	86.786	ENSORLG00015019165	scrt1b	99	86.786	Oryzias_latipes_hsok
ENSELUG00000022228	scrt1a	99	86.786	ENSOMEG00000003925	scrt1b	99	86.786	Oryzias_melastigma
ENSELUG00000022228	scrt1a	100	77.926	ENSOMEG00000000286	-	100	77.926	Oryzias_melastigma
ENSELUG00000022228	scrt1a	96	66.558	ENSOMEG00000002661	scrt2	97	66.558	Oryzias_melastigma
ENSELUG00000022228	scrt1a	99	91.727	ENSPKIG00000020085	scrt1a	99	91.727	Paramormyrops_kingsleyae
ENSELUG00000022228	scrt1a	99	89.209	ENSPKIG00000022303	SCRT1	99	89.209	Paramormyrops_kingsleyae
ENSELUG00000022228	scrt1a	100	76.610	ENSPMGG00000021402	-	100	76.610	Periophthalmus_magnuspinnatus
ENSELUG00000022228	scrt1a	96	72.662	ENSPMGG00000016561	scrt2	96	72.662	Periophthalmus_magnuspinnatus
ENSELUG00000022228	scrt1a	99	84.946	ENSPMGG00000002260	scrt1b	99	84.946	Periophthalmus_magnuspinnatus
ENSELUG00000022228	scrt1a	100	77.258	ENSPFOG00000005616	-	100	77.258	Poecilia_formosa
ENSELUG00000022228	scrt1a	99	85.305	ENSPFOG00000017719	scrt1b	99	85.305	Poecilia_formosa
ENSELUG00000022228	scrt1a	96	65.909	ENSPFOG00000007738	scrt2	97	65.909	Poecilia_formosa
ENSELUG00000022228	scrt1a	96	71.377	ENSPLAG00000005765	scrt2	96	71.377	Poecilia_latipinna
ENSELUG00000022228	scrt1a	99	85.305	ENSPLAG00000009876	scrt1b	99	85.305	Poecilia_latipinna
ENSELUG00000022228	scrt1a	100	77.258	ENSPLAG00000011718	-	100	77.258	Poecilia_latipinna
ENSELUG00000022228	scrt1a	100	77.258	ENSPMEG00000011706	-	100	77.258	Poecilia_mexicana
ENSELUG00000022228	scrt1a	99	85.305	ENSPMEG00000013274	scrt1b	99	85.305	Poecilia_mexicana
ENSELUG00000022228	scrt1a	96	71.377	ENSPMEG00000001538	scrt2	96	71.377	Poecilia_mexicana
ENSELUG00000022228	scrt1a	100	77.258	ENSPREG00000012166	-	100	77.258	Poecilia_reticulata
ENSELUG00000022228	scrt1a	99	85.305	ENSPREG00000018985	scrt1b	99	85.305	Poecilia_reticulata
ENSELUG00000022228	scrt1a	96	65.909	ENSPREG00000001147	scrt2	97	65.909	Poecilia_reticulata
ENSELUG00000022228	scrt1a	96	69.818	ENSPNYG00000013109	scrt2	96	69.818	Pundamilia_nyererei
ENSELUG00000022228	scrt1a	100	78.000	ENSPNYG00000008865	-	100	78.000	Pundamilia_nyererei
ENSELUG00000022228	scrt1a	99	87.143	ENSPNYG00000017733	scrt1b	99	87.143	Pundamilia_nyererei
ENSELUG00000022228	scrt1a	99	81.949	ENSPNAG00000027880	-	100	81.949	Pygocentrus_nattereri
ENSELUG00000022228	scrt1a	99	88.849	ENSPNAG00000017415	scrt1a	99	88.849	Pygocentrus_nattereri
ENSELUG00000022228	scrt1a	99	86.691	ENSSFOG00015001195	SCRT1	99	86.691	Scleropages_formosus
ENSELUG00000022228	scrt1a	100	76.821	ENSSMAG00000005122	-	100	76.821	Scophthalmus_maximus
ENSELUG00000022228	scrt1a	100	85.765	ENSSMAG00000019207	scrt1b	100	85.765	Scophthalmus_maximus
ENSELUG00000022228	scrt1a	100	78.000	ENSSDUG00000013215	-	100	78.000	Seriola_dumerili
ENSELUG00000022228	scrt1a	99	87.500	ENSSDUG00000007752	scrt1b	99	87.500	Seriola_dumerili
ENSELUG00000022228	scrt1a	98	66.330	ENSSDUG00000001637	scrt2	96	66.330	Seriola_dumerili
ENSELUG00000022228	scrt1a	100	78.000	ENSSLDG00000016454	-	100	78.000	Seriola_lalandi_dorsalis
ENSELUG00000022228	scrt1a	99	87.500	ENSSLDG00000017166	scrt1b	99	87.500	Seriola_lalandi_dorsalis
ENSELUG00000022228	scrt1a	96	65.909	ENSSLDG00000013565	scrt2	97	65.909	Seriola_lalandi_dorsalis
ENSELUG00000022228	scrt1a	96	67.037	ENSSPUG00000018637	SCRT2	97	67.037	Sphenodon_punctatus
ENSELUG00000022228	scrt1a	96	70.545	ENSSPAG00000014018	scrt2	96	70.545	Stegastes_partitus
ENSELUG00000022228	scrt1a	100	76.333	ENSSPAG00000006788	-	100	78.333	Stegastes_partitus
ENSELUG00000022228	scrt1a	99	87.500	ENSSPAG00000002200	scrt1b	99	87.500	Stegastes_partitus
ENSELUG00000022228	scrt1a	83	71.861	ENSTGUG00000006801	SCRT2	99	71.861	Taeniopygia_guttata
ENSELUG00000022228	scrt1a	96	68.621	ENSTRUG00000007620	scrt2	96	68.621	Takifugu_rubripes
ENSELUG00000022228	scrt1a	100	77.592	ENSTRUG00000012719	-	100	77.592	Takifugu_rubripes
ENSELUG00000022228	scrt1a	99	85.252	ENSTRUG00000011637	scrt1b	100	85.252	Takifugu_rubripes
ENSELUG00000022228	scrt1a	86	77.551	ENSTRUG00000019558	-	82	77.551	Takifugu_rubripes
ENSELUG00000022228	scrt1a	96	71.942	ENSTNIG00000012473	scrt2	97	71.942	Tetraodon_nigroviridis
ENSELUG00000022228	scrt1a	99	85.000	ENSTNIG00000018384	scrt1b	99	85.000	Tetraodon_nigroviridis
ENSELUG00000022228	scrt1a	96	67.568	ENSXCOG00000014367	scrt2	96	67.568	Xiphophorus_couchianus
ENSELUG00000022228	scrt1a	99	84.946	ENSXCOG00000019675	scrt1b	99	84.946	Xiphophorus_couchianus
ENSELUG00000022228	scrt1a	100	76.842	ENSXCOG00000019861	-	100	76.842	Xiphophorus_couchianus
ENSELUG00000022228	scrt1a	100	76.923	ENSXMAG00000015353	-	100	76.923	Xiphophorus_maculatus
ENSELUG00000022228	scrt1a	99	84.946	ENSXMAG00000027885	scrt1b	99	84.946	Xiphophorus_maculatus
ENSELUG00000022228	scrt1a	96	66.234	ENSXMAG00000028567	scrt2	97	66.234	Xiphophorus_maculatus