EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000022257 (Gene tree)
Gene ID: 105024363
Gene Symbol: eif3c
Alias: eif3s8|fi37c04|wu:fb34a08|wu:fi37c04|zgc:66128
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 24400 bases
Position: chrLG05:32832920-32857319
Accession: 105024363
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000023253	eIF-3c_N	PF05470.12	2.5e-245	1	1
ENSELUP00000041324	eIF-3c_N	PF05470.12	2.5e-245	1	1
ENSELUP00000041333	eIF-3c_N	PF05470.12	2.6e-245	1	1
ENSELUP00000041312	eIF-3c_N	PF05470.12	2.7e-245	1	1
ENSELUP00000023259	eIF-3c_N	PF05470.12	3.1e-245	1	1
ENSELUP00000041294	eIF-3c_N	PF05470.12	3.2e-243	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000042620	-	5755	XM_010894262	ENSELUP00000041324	997 (aa)	XP_010892564	UPI000576B2EF
ENSELUT00000034342	-	2490	-	ENSELUP00000041294	829 (aa)	-	-
ENSELUT00000034417	-	5797	XM_010894261	ENSELUP00000041333	1011 (aa)	XP_010892563	UPI000577419A
ENSELUT00000034377	-	3201	XM_010894266	ENSELUP00000041312	984 (aa)	XP_010892568	UPI000576A454
ENSELUT00000042606	-	3237	XM_010894263	ENSELUP00000023253	996 (aa)	XP_010892565	UPI0005765E5C
ENSELUT00000034393	-	5668	XM_010894267	ENSELUP00000023259	968 (aa)	XP_010892569	UPI0005777A76

Gene Model

Click here to download ENSELUG00000022257's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000022257's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000022257	eif3c	92	83.748	ENSG00000205609	EIF3CL	99	76.227	Homo_sapiens
ENSELUG00000022257	eif3c	92	83.748	ENSG00000184110	EIF3C	100	86.076	Homo_sapiens
ENSELUG00000022257	eif3c	99	88.822	ENSAPOG00000024092	eif3c	99	89.904	Acanthochromis_polyacanthus
ENSELUG00000022257	eif3c	92	83.914	ENSAMEG00000015454	-	99	75.952	Ailuropoda_melanoleuca
ENSELUG00000022257	eif3c	99	84.259	ENSACIG00000015082	eif3c	100	82.037	Amphilophus_citrinellus
ENSELUG00000022257	eif3c	92	96.273	ENSAOCG00000021466	eif3c	100	87.063	Amphiprion_ocellaris
ENSELUG00000022257	eif3c	92	96.273	ENSAPEG00000010521	eif3c	100	87.063	Amphiprion_percula
ENSELUG00000022257	eif3c	92	95.031	ENSATEG00000019001	eif3c	100	86.653	Anabas_testudineus
ENSELUG00000022257	eif3c	93	85.505	ENSACAG00000005937	-	99	77.149	Anolis_carolinensis
ENSELUG00000022257	eif3c	92	83.748	ENSANAG00000020640	-	99	76.009	Aotus_nancymaae
ENSELUG00000022257	eif3c	99	84.906	ENSACLG00000009347	eif3c	91	92.346	Astatotilapia_calliptera
ENSELUG00000022257	eif3c	99	82.697	ENSACLG00000009322	eif3c	99	82.816	Astatotilapia_calliptera
ENSELUG00000022257	eif3c	92	93.069	ENSAMXG00000020949	eif3c	100	86.674	Astyanax_mexicanus
ENSELUG00000022257	eif3c	92	83.914	ENSBTAG00000006543	EIF3CL	99	75.817	Bos_taurus
ENSELUG00000022257	eif3c	98	42.067	WBGene00001226	eif-3.C	99	42.239	Caenorhabditis_elegans
ENSELUG00000022257	eif3c	92	83.748	ENSCJAG00000006341	-	98	78.962	Callithrix_jacchus
ENSELUG00000022257	eif3c	92	83.914	ENSCAFG00000017143	-	99	76.061	Canis_familiaris
ENSELUG00000022257	eif3c	92	83.914	ENSCAFG00020017587	-	99	76.061	Canis_lupus_dingo
ENSELUG00000022257	eif3c	92	83.914	ENSCHIG00000024795	-	99	75.708	Capra_hircus
ENSELUG00000022257	eif3c	92	83.582	ENSTSYG00000003486	-	99	75.900	Carlito_syrichta
ENSELUG00000022257	eif3c	88	85.714	ENSCAPG00000015887	-	84	85.714	Cavia_aperea
ENSELUG00000022257	eif3c	92	83.416	ENSCPOG00000007533	-	99	75.734	Cavia_porcellus
ENSELUG00000022257	eif3c	97	75.889	ENSCCAG00000027724	-	99	71.164	Cebus_capucinus
ENSELUG00000022257	eif3c	92	83.748	ENSCCAG00000034928	-	99	75.682	Cebus_capucinus
ENSELUG00000022257	eif3c	93	71.870	ENSCCAG00000029099	-	98	64.088	Cebus_capucinus
ENSELUG00000022257	eif3c	92	83.748	ENSCATG00000032673	-	99	76.118	Cercocebus_atys
ENSELUG00000022257	eif3c	92	83.748	ENSCLAG00000011094	-	99	75.245	Chinchilla_lanigera
ENSELUG00000022257	eif3c	92	83.748	ENSCSAG00000006297	-	99	76.118	Chlorocebus_sabaeus
ENSELUG00000022257	eif3c	59	67.433	ENSCHOG00000003120	-	88	67.433	Choloepus_hoffmanni
ENSELUG00000022257	eif3c	76	82.407	ENSCPBG00000012407	-	87	82.407	Chrysemys_picta_bellii
ENSELUG00000022257	eif3c	93	52.005	ENSCSAVG00000006744	-	90	56.567	Ciona_savignyi
ENSELUG00000022257	eif3c	92	83.748	ENSCANG00000033626	-	99	76.118	Colobus_angolensis_palliatus
ENSELUG00000022257	eif3c	92	82.919	ENSCGRG00001015265	EIF3C	99	74.429	Cricetulus_griseus_chok1gshd
ENSELUG00000022257	eif3c	92	93.355	ENSCSEG00000017770	eif3c	100	83.864	Cynoglossus_semilaevis
ENSELUG00000022257	eif3c	92	94.410	ENSCVAG00000005402	eif3c	99	91.326	Cyprinodon_variegatus
ENSELUG00000022257	eif3c	92	95.530	ENSDARG00000016443	eif3c	100	87.300	Danio_rerio
ENSELUG00000022257	eif3c	92	83.914	ENSDNOG00000031497	-	99	75.952	Dasypus_novemcinctus
ENSELUG00000022257	eif3c	92	83.250	ENSDORG00000016471	Eif3c	99	75.517	Dipodomys_ordii
ENSELUG00000022257	eif3c	92	57.214	FBgn0034258	eIF3c	99	50.746	Drosophila_melanogaster
ENSELUG00000022257	eif3c	86	85.780	ENSETEG00000013527	-	91	85.845	Echinops_telfairi
ENSELUG00000022257	eif3c	93	71.111	ENSEBUG00000001629	eif3c	99	63.113	Eptatretus_burgeri
ENSELUG00000022257	eif3c	92	83.914	ENSECAG00000008746	-	99	76.486	Equus_caballus
ENSELUG00000022257	eif3c	79	84.921	ENSEEUG00000006148	-	99	76.185	Erinaceus_europaeus
ENSELUG00000022257	eif3c	68	55.732	ENSEEUG00000000726	-	64	54.839	Erinaceus_europaeus
ENSELUG00000022257	eif3c	92	83.802	ENSFCAG00000015782	-	99	75.843	Felis_catus
ENSELUG00000022257	eif3c	92	83.582	ENSFDAG00000003588	-	99	75.734	Fukomys_damarensis
ENSELUG00000022257	eif3c	94	94.410	ENSFHEG00000014154	EIF3C	100	85.079	Fundulus_heteroclitus
ENSELUG00000022257	eif3c	90	94.218	ENSGMOG00000016885	eif3c	100	87.514	Gadus_morhua
ENSELUG00000022257	eif3c	89	94.410	ENSGACG00000007652	eif3c	100	84.848	Gasterosteus_aculeatus
ENSELUG00000022257	eif3c	83	84.692	ENSGAGG00000006666	-	100	75.733	Gopherus_agassizii
ENSELUG00000022257	eif3c	50	77.778	ENSGGOG00000022677	-	99	77.778	Gorilla_gorilla
ENSELUG00000022257	eif3c	92	83.582	ENSGGOG00000026919	EIF3C	99	76.584	Gorilla_gorilla
ENSELUG00000022257	eif3c	92	83.748	ENSHGLG00000011445	EIF3C	99	75.734	Heterocephalus_glaber_female
ENSELUG00000022257	eif3c	92	83.748	ENSHGLG00100000217	EIF3C	99	75.734	Heterocephalus_glaber_male
ENSELUG00000022257	eif3c	92	95.031	ENSHCOG00000019694	eif3c	100	83.741	Hippocampus_comes
ENSELUG00000022257	eif3c	93	93.212	ENSIPUG00000016878	eif3c	100	85.790	Ictalurus_punctatus
ENSELUG00000022257	eif3c	92	83.582	ENSSTOG00000021278	-	99	75.791	Ictidomys_tridecemlineatus
ENSELUG00000022257	eif3c	92	82.090	ENSJJAG00000012722	Eif3c	99	74.538	Jaculus_jaculus
ENSELUG00000022257	eif3c	94	95.652	ENSKMAG00000021662	eif3c	99	85.881	Kryptolebias_marmoratus
ENSELUG00000022257	eif3c	92	96.894	ENSLBEG00000023370	eif3c	100	85.957	Labrus_bergylta
ENSELUG00000022257	eif3c	91	89.244	ENSLACG00000000770	eif3c	99	79.913	Latimeria_chalumnae
ENSELUG00000022257	eif3c	92	83.582	ENSLAFG00000027426	-	99	75.791	Loxodonta_africana
ENSELUG00000022257	eif3c	92	83.748	ENSMFAG00000041930	-	99	76.118	Macaca_fascicularis
ENSELUG00000022257	eif3c	92	83.748	ENSMMUG00000011798	-	99	76.118	Macaca_mulatta
ENSELUG00000022257	eif3c	92	83.748	ENSMNEG00000023915	-	99	76.118	Macaca_nemestrina
ENSELUG00000022257	eif3c	92	83.748	ENSMLEG00000027529	-	99	76.118	Mandrillus_leucophaeus
ENSELUG00000022257	eif3c	93	93.789	ENSMAMG00000012512	eif3c	100	86.214	Mastacembelus_armatus
ENSELUG00000022257	eif3c	94	92.346	ENSMZEG00005013699	eif3c	99	84.390	Maylandia_zebra
ENSELUG00000022257	eif3c	99	83.990	ENSMZEG00005013685	eif3c	99	82.915	Maylandia_zebra
ENSELUG00000022257	eif3c	92	82.919	ENSMAUG00000010621	Eif3c	99	74.538	Mesocricetus_auratus
ENSELUG00000022257	eif3c	92	83.914	ENSMICG00000036748	-	99	76.279	Microcebus_murinus
ENSELUG00000022257	eif3c	92	82.919	ENSMOCG00000004204	Eif3c	99	73.123	Microtus_ochrogaster
ENSELUG00000022257	eif3c	99	84.569	ENSMMOG00000001572	eif3c	99	84.754	Mola_mola
ENSELUG00000022257	eif3c	92	83.389	ENSMODG00000015579	-	99	76.009	Monodelphis_domestica
ENSELUG00000022257	eif3c	99	87.923	ENSMALG00000008907	eif3c	100	91.018	Monopterus_albus
ENSELUG00000022257	eif3c	92	82.421	MGP_CAROLIEiJ_G0030451	Eif3c	99	74.074	Mus_caroli
ENSELUG00000022257	eif3c	92	82.421	ENSMUSG00000030738	Eif3c	99	74.074	Mus_musculus
ENSELUG00000022257	eif3c	92	81.758	MGP_PahariEiJ_G0013661	Eif3c	99	73.747	Mus_pahari
ENSELUG00000022257	eif3c	92	82.421	MGP_SPRETEiJ_G0031565	Eif3c	99	74.074	Mus_spretus
ENSELUG00000022257	eif3c	88	83.594	ENSMPUG00000012732	-	99	76.584	Mustela_putorius_furo
ENSELUG00000022257	eif3c	92	83.582	ENSMLUG00000015558	-	99	75.847	Myotis_lucifugus
ENSELUG00000022257	eif3c	84	64.132	ENSNGAG00000010901	-	97	61.818	Nannospalax_galili
ENSELUG00000022257	eif3c	92	83.250	ENSNGAG00000007177	-	99	75.082	Nannospalax_galili
ENSELUG00000022257	eif3c	99	68.146	ENSNLEG00000001425	-	99	66.667	Nomascus_leucogenys
ENSELUG00000022257	eif3c	92	69.269	ENSMEUG00000009939	-	99	64.410	Notamacropus_eugenii
ENSELUG00000022257	eif3c	90	49.667	ENSMEUG00000005317	-	93	62.385	Notamacropus_eugenii
ENSELUG00000022257	eif3c	92	83.416	ENSOPRG00000000931	-	99	75.490	Ochotona_princeps
ENSELUG00000022257	eif3c	92	83.582	ENSODEG00000013508	-	99	75.517	Octodon_degus
ENSELUG00000022257	eif3c	72	68.937	ENSONIG00000011434	eif3c	99	69.421	Oreochromis_niloticus
ENSELUG00000022257	eif3c	92	81.366	ENSOANG00000011410	-	99	72.932	Ornithorhynchus_anatinus
ENSELUG00000022257	eif3c	92	83.914	ENSOCUG00000022489	-	99	75.843	Oryctolagus_cuniculus
ENSELUG00000022257	eif3c	92	94.410	ENSORLG00000006318	eif3c	90	93.857	Oryzias_latipes
ENSELUG00000022257	eif3c	92	94.410	ENSORLG00020015713	eif3c	99	84.339	Oryzias_latipes_hni
ENSELUG00000022257	eif3c	92	94.410	ENSORLG00015013772	eif3c	100	84.166	Oryzias_latipes_hsok
ENSELUG00000022257	eif3c	92	95.031	ENSOMEG00000020450	eif3c	100	84.771	Oryzias_melastigma
ENSELUG00000022257	eif3c	92	83.416	ENSOGAG00000012737	-	99	75.843	Otolemur_garnettii
ENSELUG00000022257	eif3c	92	83.914	ENSOARG00000002892	-	99	75.708	Ovis_aries
ENSELUG00000022257	eif3c	92	83.802	ENSPPRG00000012336	-	99	75.843	Panthera_pardus
ENSELUG00000022257	eif3c	92	83.802	ENSPTIG00000011712	-	99	75.843	Panthera_tigris_altaica
ENSELUG00000022257	eif3c	92	83.748	ENSPANG00000021151	-	99	76.118	Papio_anubis
ENSELUG00000022257	eif3c	98	90.683	ENSPKIG00000002049	eif3c	100	85.091	Paramormyrops_kingsleyae
ENSELUG00000022257	eif3c	99	84.994	ENSPMGG00000005409	eif3c	100	82.116	Periophthalmus_magnuspinnatus
ENSELUG00000022257	eif3c	92	82.919	ENSPEMG00000010899	Eif3c	99	74.320	Peromyscus_maniculatus_bairdii
ENSELUG00000022257	eif3c	92	83.056	ENSPCIG00000025206	-	99	76.503	Phascolarctos_cinereus
ENSELUG00000022257	eif3c	93	95.652	ENSPFOG00000004476	eif3c	100	85.487	Poecilia_formosa
ENSELUG00000022257	eif3c	99	85.395	ENSPLAG00000017480	eif3c	100	84.554	Poecilia_latipinna
ENSELUG00000022257	eif3c	93	95.652	ENSPMEG00000019512	eif3c	100	85.472	Poecilia_mexicana
ENSELUG00000022257	eif3c	99	85.765	ENSPREG00000023139	eif3c	100	81.311	Poecilia_reticulata
ENSELUG00000022257	eif3c	92	80.597	ENSPPYG00000007227	-	99	74.074	Pongo_abelii
ENSELUG00000022257	eif3c	71	83.474	ENSPCAG00000012710	-	99	83.195	Procavia_capensis
ENSELUG00000022257	eif3c	92	83.914	ENSPCOG00000019289	-	99	76.170	Propithecus_coquereli
ENSELUG00000022257	eif3c	92	83.748	ENSPVAG00000005804	-	99	75.952	Pteropus_vampyrus
ENSELUG00000022257	eif3c	62	76.027	ENSPNYG00000016530	eif3c	83	88.485	Pundamilia_nyererei
ENSELUG00000022257	eif3c	92	93.511	ENSPNAG00000024040	eif3c	96	90.299	Pygocentrus_nattereri
ENSELUG00000022257	eif3c	92	82.421	ENSRNOG00000018761	Eif3c	99	73.965	Rattus_norvegicus
ENSELUG00000022257	eif3c	92	82.638	ENSRBIG00000044009	-	98	74.834	Rhinopithecus_bieti
ENSELUG00000022257	eif3c	92	83.748	ENSRROG00000043626	-	99	76.118	Rhinopithecus_roxellana
ENSELUG00000022257	eif3c	78	31.239	YMR309C	-	81	31.532	Saccharomyces_cerevisiae
ENSELUG00000022257	eif3c	92	83.748	ENSSBOG00000032155	-	99	75.900	Saimiri_boliviensis_boliviensis
ENSELUG00000022257	eif3c	88	85.938	ENSSHAG00000011808	-	99	76.749	Sarcophilus_harrisii
ENSELUG00000022257	eif3c	99	91.925	ENSSFOG00015021823	eif3c	100	83.850	Scleropages_formosus
ENSELUG00000022257	eif3c	90	95.031	ENSSMAG00000016638	eif3c	97	87.054	Scophthalmus_maximus
ENSELUG00000022257	eif3c	92	95.062	ENSSDUG00000023117	eif3c	100	87.367	Seriola_dumerili
ENSELUG00000022257	eif3c	99	90.459	ENSSLDG00000009706	eif3c	99	90.459	Seriola_lalandi_dorsalis
ENSELUG00000022257	eif3c	93	84.528	ENSSPUG00000016470	-	99	76.554	Sphenodon_punctatus
ENSELUG00000022257	eif3c	92	95.652	ENSSPAG00000000426	eif3c	100	87.271	Stegastes_partitus
ENSELUG00000022257	eif3c	92	83.250	ENSSSCG00000034927	-	99	75.626	Sus_scrofa
ENSELUG00000022257	eif3c	92	93.789	ENSTRUG00000008951	eif3c	99	85.272	Takifugu_rubripes
ENSELUG00000022257	eif3c	93	93.789	ENSTNIG00000015210	eif3c	100	83.495	Tetraodon_nigroviridis
ENSELUG00000022257	eif3c	92	83.582	ENSTTRG00000005880	-	99	75.952	Tursiops_truncatus
ENSELUG00000022257	eif3c	73	83.914	ENSUAMG00000001127	-	91	92.675	Ursus_americanus
ENSELUG00000022257	eif3c	92	83.914	ENSUMAG00000010927	-	99	75.952	Ursus_maritimus
ENSELUG00000022257	eif3c	92	81.924	ENSVVUG00000025970	-	99	75.191	Vulpes_vulpes
ENSELUG00000022257	eif3c	92	84.236	ENSXETG00000002941	eif3c	100	77.419	Xenopus_tropicalis
ENSELUG00000022257	eif3c	93	95.031	ENSXMAG00000013796	eif3c	100	84.657	Xiphophorus_maculatus