EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000022266 (Gene tree)
Gene ID: 105012107
Gene Symbol: SRL (1 of many)
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 15541 bases
Position: chrLG09:12907855-12923395
Accession: 105012107
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000041426	MMR_HSR1	PF01926.23	2.5e-08	1	1
ENSELUP00000041445	MMR_HSR1	PF01926.23	2.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000034602	SRL (1 of many)-202	3960	XM_010872738	ENSELUP00000041445	930 (aa)	XP_010871040	-
ENSELUT00000034594	SRL (1 of many)-201	3864	-	ENSELUP00000041426	898 (aa)	-	-

Gene Model

Click here to download ENSELUG00000022266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000022266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000022266	SRL	58	73.077	ENSATEG00000009643	SRL	57	76.447	Anabas_testudineus
ENSELUG00000022266	SRL	75	58.333	ENSACLG00000024674	SRL	70	80.201	Astatotilapia_calliptera
ENSELUG00000022266	SRL	51	76.797	ENSCVAG00000022465	SRL	89	70.197	Cyprinodon_variegatus
ENSELUG00000022266	SRL	57	72.037	ENSFHEG00000011854	SRL	99	80.044	Fundulus_heteroclitus
ENSELUG00000022266	SRL	52	76.506	ENSGAFG00000016984	SRL	99	79.646	Gambusia_affinis
ENSELUG00000022266	SRL	93	53.977	ENSHCOG00000001012	SRL	67	65.484	Hippocampus_comes
ENSELUG00000022266	SRL	55	74.212	ENSKMAG00000019537	SRL	99	81.532	Kryptolebias_marmoratus
ENSELUG00000022266	SRL	59	71.127	ENSMAMG00000013756	SRL	70	66.129	Mastacembelus_armatus
ENSELUG00000022266	SRL	54	73.633	ENSMZEG00005004010	SRL	71	62.276	Maylandia_zebra
ENSELUG00000022266	SRL	50	71.154	ENSMODG00000016380	-	52	70.299	Monodelphis_domestica
ENSELUG00000022266	SRL	51	69.199	MGP_CAROLIEiJ_G0020400	Srl	88	76.923	Mus_caroli
ENSELUG00000022266	SRL	51	69.199	ENSMUSG00000022519	Srl	88	76.923	Mus_musculus
ENSELUG00000022266	SRL	51	69.199	MGP_SPRETEiJ_G0021294	Srl	88	76.923	Mus_spretus
ENSELUG00000022266	SRL	50	73.036	ENSNBRG00000023775	srl	97	73.362	Neolamprologus_brichardi
ENSELUG00000022266	SRL	94	54.994	ENSNBRG00000002422	SRL	90	66.667	Neolamprologus_brichardi
ENSELUG00000022266	SRL	64	78.696	ENSORLG00000015064	SRL	98	79.601	Oryzias_latipes
ENSELUG00000022266	SRL	52	67.909	ENSPKIG00000024974	SRL	88	71.236	Paramormyrops_kingsleyae
ENSELUG00000022266	SRL	53	73.400	ENSPLAG00000002932	SRL	99	78.761	Poecilia_latipinna
ENSELUG00000022266	SRL	53	73.600	ENSPMEG00000005890	SRL	65	73.400	Poecilia_mexicana
ENSELUG00000022266	SRL	53	73.767	ENSPREG00000000315	SRL	99	79.646	Poecilia_reticulata
ENSELUG00000022266	SRL	54	73.633	ENSPNYG00000003423	SRL	71	62.114	Pundamilia_nyererei
ENSELUG00000022266	SRL	64	66.879	ENSSMAG00000002232	SRL	99	51.809	Scophthalmus_maximus
ENSELUG00000022266	SRL	50	73.276	ENSSPAG00000019105	srl	95	73.568	Stegastes_partitus
ENSELUG00000022266	SRL	50	76.017	ENSTRUG00000013310	SRL	81	63.766	Takifugu_rubripes
ENSELUG00000022266	SRL	53	74.000	ENSXMAG00000027598	SRL	68	74.044	Xiphophorus_maculatus