EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000022291 (Gene tree)
Gene ID
105025879
Gene Symbol
u2af2b
Alias
-
Full Name
splicing factor U2AF 65 kDa subunit-like
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Plus strand
Length
8833 bases
Position
chrLG10:5704559-5713391
Accession
105025879
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000041418RRM_1PF00076.221e-3413
ENSELUP00000041418RRM_1PF00076.221e-3423
ENSELUP00000041418RRM_1PF00076.221e-3433
ENSELUP00000023413RRM_1PF00076.221.2e-3413
ENSELUP00000023413RRM_1PF00076.221.2e-3423
ENSELUP00000023413RRM_1PF00076.221.2e-3433
ENSELUP00000023403RRM_1PF00076.222.8e-1712
ENSELUP00000023403RRM_1PF00076.222.8e-1722
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000034583-3608XM_020050007ENSELUP00000041418460 (aa)XP_019905566UPI0009732C0C
ENSELUT00000034591-3647XM_010896902ENSELUP00000023413473 (aa)XP_010895204UPI000576532B
ENSELUT00000034576-3524-ENSELUP00000023403432 (aa)--
Gene Model
Click here to download ENSELUG00000022291's gene model file
Pathways
Pathway IDPathway NameSource
els03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000022291's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000022291u2af2b10084.025ENSELUG00000015850u2af2a10086.722
ENSELUG00000022291u2af2b9970.913ENSELUG00000018459-10071.125
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000022291u2af2b10083.298ENSG00000063244U2AF210091.234Homo_sapiens
ENSELUG00000022291u2af2b6789.506ENSAPOG00000023155u2af2a10089.506Acanthochromis_polyacanthus
ENSELUG00000022291u2af2b9971.882ENSAPOG00000002208-10071.975Acanthochromis_polyacanthus
ENSELUG00000022291u2af2b7788.636ENSAMEG00000003864U2AF210081.401Ailuropoda_melanoleuca
ENSELUG00000022291u2af2b9970.488ENSACIG00000014173-10070.064Amphilophus_citrinellus
ENSELUG00000022291u2af2b8592.583ENSACIG00000005749u2af2a9491.912Amphilophus_citrinellus
ENSELUG00000022291u2af2b9971.882ENSAOCG00000003595-10071.975Amphiprion_ocellaris
ENSELUG00000022291u2af2b9986.047ENSAOCG00000015571u2af2a10089.154Amphiprion_ocellaris
ENSELUG00000022291u2af2b8592.839ENSAPEG00000009376u2af2a9592.118Amphiprion_percula
ENSELUG00000022291u2af2b9970.172ENSAPEG00000020062-9075.000Amphiprion_percula
ENSELUG00000022291u2af2b10085.053ENSATEG00000022332u2af2a10087.158Anabas_testudineus
ENSELUG00000022291u2af2b8778.446ENSATEG00000020577-9075.837Anabas_testudineus
ENSELUG00000022291u2af2b10083.439ENSACAG00000015489U2AF210083.864Anolis_carolinensis
ENSELUG00000022291u2af2b10081.944ENSANAG00000028042U2AF210081.944Aotus_nancymaae
ENSELUG00000022291u2af2b10085.865ENSACLG00000022181u2af2a10086.947Astatotilapia_calliptera
ENSELUG00000022291u2af2b9971.882ENSACLG00000020793-10071.975Astatotilapia_calliptera
ENSELUG00000022291u2af2b10084.958ENSAMXG00000033347u2af2a10085.835Astyanax_mexicanus
ENSELUG00000022291u2af2b9987.146ENSAMXG00000039454u2af2b9986.928Astyanax_mexicanus
ENSELUG00000022291u2af2b10085.435ENSBTAG00000002830U2AF210085.652Bos_taurus
ENSELUG00000022291u2af2b8758.000WBGene00006697uaf-110053.020Caenorhabditis_elegans
ENSELUG00000022291u2af2b10082.600ENSCJAG00000017128U2AF210082.600Callithrix_jacchus
ENSELUG00000022291u2af2b10083.298ENSCAFG00000002551U2AF210083.298Canis_familiaris
ENSELUG00000022291u2af2b8689.027ENSCAFG00020015445U2AF29781.720Canis_lupus_dingo
ENSELUG00000022291u2af2b8674.436ENSCHIG00000023595U2AF29370.824Capra_hircus
ENSELUG00000022291u2af2b10082.600ENSTSYG00000007432U2AF210082.600Carlito_syrichta
ENSELUG00000022291u2af2b8689.223ENSCAPG00000008466U2AF210082.609Cavia_aperea
ENSELUG00000022291u2af2b10082.600ENSCPOG00000001582U2AF210082.600Cavia_porcellus
ENSELUG00000022291u2af2b10082.600ENSCCAG00000023336U2AF210082.600Cebus_capucinus
ENSELUG00000022291u2af2b10083.298ENSCATG00000004637U2AF210083.298Cercocebus_atys
ENSELUG00000022291u2af2b10083.298ENSCLAG00000000596U2AF210083.298Chinchilla_lanigera
ENSELUG00000022291u2af2b10083.298ENSCSAG00000001722U2AF210083.298Chlorocebus_sabaeus
ENSELUG00000022291u2af2b8587.970ENSCPBG00000004485U2AF210091.234Chrysemys_picta_bellii
ENSELUG00000022291u2af2b8570.483ENSCING00000003455-9264.667Ciona_intestinalis
ENSELUG00000022291u2af2b8569.744ENSCSAVG00000006813-9962.554Ciona_savignyi
ENSELUG00000022291u2af2b10076.261ENSCANG00000043845-10076.907Colobus_angolensis_palliatus
ENSELUG00000022291u2af2b9182.791ENSCANG00000031002-9682.791Colobus_angolensis_palliatus
ENSELUG00000022291u2af2b10085.652ENSCGRG00001003185-10085.870Cricetulus_griseus_chok1gshd
ENSELUG00000022291u2af2b9976.695ENSCGRG00001007486-9977.070Cricetulus_griseus_chok1gshd
ENSELUG00000022291u2af2b9976.695ENSCGRG00000018587-9977.070Cricetulus_griseus_crigri
ENSELUG00000022291u2af2b5090.043ENSCGRG00000004524-7986.122Cricetulus_griseus_crigri
ENSELUG00000022291u2af2b9969.510ENSCSEG00000020504-9372.792Cynoglossus_semilaevis
ENSELUG00000022291u2af2b7490.506ENSCSEG00000018709u2af2a9590.506Cynoglossus_semilaevis
ENSELUG00000022291u2af2b9971.822ENSCVAG00000023307-10072.187Cyprinodon_variegatus
ENSELUG00000022291u2af2b10085.654ENSCVAG00000001259u2af2a10088.745Cyprinodon_variegatus
ENSELUG00000022291u2af2b10082.292ENSDARG00000011740u2af2b10084.167Danio_rerio
ENSELUG00000022291u2af2b10082.906ENSDARG00000012505u2af2a10086.752Danio_rerio
ENSELUG00000022291u2af2b9182.791ENSDNOG00000047039U2AF29682.791Dasypus_novemcinctus
ENSELUG00000022291u2af2b10082.600ENSDORG00000003250U2af210082.600Dipodomys_ordii
ENSELUG00000022291u2af2b8469.975FBgn0005411U2af5010069.973Drosophila_melanogaster
ENSELUG00000022291u2af2b8750.117FBgn0034834LS29549.318Drosophila_melanogaster
ENSELUG00000022291u2af2b9073.077ENSEBUG00000010917U2AF210067.391Eptatretus_burgeri
ENSELUG00000022291u2af2b9556.120ENSEBUG00000001732U2AF29759.556Eptatretus_burgeri
ENSELUG00000022291u2af2b8788.424ENSEASG00005020708U2AF29083.224Equus_asinus_asinus
ENSELUG00000022291u2af2b10085.652ENSECAG00000010110U2AF210085.870Equus_caballus
ENSELUG00000022291u2af2b10082.600ENSFCAG00000011504U2AF210082.600Felis_catus
ENSELUG00000022291u2af2b8689.223ENSFDAG00000011264U2AF29981.104Fukomys_damarensis
ENSELUG00000022291u2af2b10085.249ENSFHEG00000016025u2af2a10088.745Fundulus_heteroclitus
ENSELUG00000022291u2af2b10088.095ENSGMOG00000004535u2af2a10088.578Gadus_morhua
ENSELUG00000022291u2af2b9882.789ENSGALG00000052748U2AF26583.224Gallus_gallus
ENSELUG00000022291u2af2b9972.163ENSGAFG00000005628-10071.922Gambusia_affinis
ENSELUG00000022291u2af2b10085.654ENSGAFG00000013626u2af2a8888.745Gambusia_affinis
ENSELUG00000022291u2af2b10086.334ENSGACG00000010632U2AF210088.769Gasterosteus_aculeatus
ENSELUG00000022291u2af2b9971.429ENSGACG00000014500-10071.429Gasterosteus_aculeatus
ENSELUG00000022291u2af2b6791.234ENSGAGG00000011849U2AF210091.234Gopherus_agassizii
ENSELUG00000022291u2af2b5679.457ENSGGOG00000036399-9679.457Gorilla_gorilla
ENSELUG00000022291u2af2b10085.865ENSHBUG00000013935u2af2a10086.947Haplochromis_burtoni
ENSELUG00000022291u2af2b9971.882ENSHBUG00000017424-10071.975Haplochromis_burtoni
ENSELUG00000022291u2af2b10082.600ENSHGLG00000005889U2AF210082.600Heterocephalus_glaber_female
ENSELUG00000022291u2af2b8689.223ENSHGLG00100004757U2AF210082.609Heterocephalus_glaber_male
ENSELUG00000022291u2af2b10084.582ENSHCOG00000019367u2af2a10085.075Hippocampus_comes
ENSELUG00000022291u2af2b9972.113ENSIPUG00000009844-10072.113Ictalurus_punctatus
ENSELUG00000022291u2af2b9983.691ENSIPUG00000009077u2af29985.622Ictalurus_punctatus
ENSELUG00000022291u2af2b10081.330ENSIPUG00000007717u2af2a10084.764Ictalurus_punctatus
ENSELUG00000022291u2af2b10082.600ENSSTOG00000019595U2AF210082.600Ictidomys_tridecemlineatus
ENSELUG00000022291u2af2b10082.600ENSJJAG00000017705U2af210082.600Jaculus_jaculus
ENSELUG00000022291u2af2b10084.421ENSKMAG00000005960u2af2a10088.964Kryptolebias_marmoratus
ENSELUG00000022291u2af2b9771.242ENSLBEG00000005001-9073.770Labrus_bergylta
ENSELUG00000022291u2af2b10085.683ENSLBEG00000016162u2af2a10089.177Labrus_bergylta
ENSELUG00000022291u2af2b8090.515ENSLACG00000001648U2AF210090.515Latimeria_chalumnae
ENSELUG00000022291u2af2b9971.882ENSLOCG00000010843-10072.553Lepisosteus_oculatus
ENSELUG00000022291u2af2b6092.419ENSLOCG00000008050u2af2b9388.073Lepisosteus_oculatus
ENSELUG00000022291u2af2b10083.368ENSLAFG00000018056-10082.600Loxodonta_africana
ENSELUG00000022291u2af2b10073.784ENSLAFG00000028496-10073.150Loxodonta_africana
ENSELUG00000022291u2af2b10082.600ENSMFAG00000038383U2AF210082.600Macaca_fascicularis
ENSELUG00000022291u2af2b10082.390ENSMMUG00000004810U2AF210082.390Macaca_mulatta
ENSELUG00000022291u2af2b10083.298ENSMNEG00000042096U2AF210083.298Macaca_nemestrina
ENSELUG00000022291u2af2b8690.127ENSMLEG00000032219U2AF28983.370Mandrillus_leucophaeus
ENSELUG00000022291u2af2b10087.179ENSMAMG00000019817u2af2a10087.607Mastacembelus_armatus
ENSELUG00000022291u2af2b9970.426ENSMAMG00000020158-10070.701Mastacembelus_armatus
ENSELUG00000022291u2af2b10085.865ENSMZEG00005016563u2af2a10088.961Maylandia_zebra
ENSELUG00000022291u2af2b9971.882ENSMZEG00005023318-10071.975Maylandia_zebra
ENSELUG00000022291u2af2b8689.223ENSMAUG00000008180U2af29982.013Mesocricetus_auratus
ENSELUG00000022291u2af2b10083.298ENSMICG00000027681U2AF210083.298Microcebus_murinus
ENSELUG00000022291u2af2b10076.110ENSMOCG00000007227-10076.110Microtus_ochrogaster
ENSELUG00000022291u2af2b6788.312ENSMOCG00000001018-10088.312Microtus_ochrogaster
ENSELUG00000022291u2af2b10082.600ENSMOCG00000013214-10082.600Microtus_ochrogaster
ENSELUG00000022291u2af2b9967.789ENSMMOG00000000531-10067.789Mola_mola
ENSELUG00000022291u2af2b8593.095ENSMMOG00000016600u2af2a9392.402Mola_mola
ENSELUG00000022291u2af2b10088.095ENSMALG00000009985u2af2a10088.095Monopterus_albus
ENSELUG00000022291u2af2b10083.298MGP_CAROLIEiJ_G0029150U2af210083.298Mus_caroli
ENSELUG00000022291u2af2b10083.298ENSMUSG00000030435U2af210091.234Mus_musculus
ENSELUG00000022291u2af2b10083.298MGP_PahariEiJ_G0021017U2af210083.298Mus_pahari
ENSELUG00000022291u2af2b10083.298MGP_SPRETEiJ_G0030203U2af210083.298Mus_spretus
ENSELUG00000022291u2af2b10083.298ENSMPUG00000007135U2AF210083.298Mustela_putorius_furo
ENSELUG00000022291u2af2b5283.884ENSMLUG00000011051-10083.884Myotis_lucifugus
ENSELUG00000022291u2af2b10082.600ENSNGAG00000020369U2af210082.600Nannospalax_galili
ENSELUG00000022291u2af2b9970.576ENSNBRG00000011100-9074.005Neolamprologus_brichardi
ENSELUG00000022291u2af2b10085.865ENSNBRG00000002568u2af2a10086.947Neolamprologus_brichardi
ENSELUG00000022291u2af2b10072.532ENSNLEG00000010562U2AF210091.234Nomascus_leucogenys
ENSELUG00000022291u2af2b8676.263ENSMEUG00000002346U2AF210071.491Notamacropus_eugenii
ENSELUG00000022291u2af2b10077.568ENSODEG00000012729-10077.568Octodon_degus
ENSELUG00000022291u2af2b9961.050ENSODEG00000009254-10060.426Octodon_degus
ENSELUG00000022291u2af2b9971.882ENSONIG00000009682-10071.975Oreochromis_niloticus
ENSELUG00000022291u2af2b10084.632ENSONIG00000012793u2af2a10086.737Oreochromis_niloticus
ENSELUG00000022291u2af2b10085.684ENSORLG00000011545u2af2a10088.939Oryzias_latipes
ENSELUG00000022291u2af2b10085.684ENSORLG00020006941u2af2a10088.939Oryzias_latipes_hni
ENSELUG00000022291u2af2b10085.684ENSORLG00015012843u2af2a10086.737Oryzias_latipes_hsok
ENSELUG00000022291u2af2b10084.177ENSOMEG00000011386u2af2a10086.287Oryzias_melastigma
ENSELUG00000022291u2af2b9752.484ENSOGAG00000034729-8060.695Otolemur_garnettii
ENSELUG00000022291u2af2b10082.600ENSOGAG00000007206-10082.600Otolemur_garnettii
ENSELUG00000022291u2af2b10074.486ENSOARG00000001091U2AF210075.103Ovis_aries
ENSELUG00000022291u2af2b10082.600ENSPPAG00000039782U2AF210082.600Pan_paniscus
ENSELUG00000022291u2af2b10082.600ENSPPRG00000013843U2AF210082.600Panthera_pardus
ENSELUG00000022291u2af2b9776.264ENSPTIG00000005489U2AF29876.044Panthera_tigris_altaica
ENSELUG00000022291u2af2b10082.600ENSPTRG00000011523U2AF210091.234Pan_troglodytes
ENSELUG00000022291u2af2b10083.298ENSPANG00000008459U2AF210083.298Papio_anubis
ENSELUG00000022291u2af2b9971.368ENSPKIG00000014878-10071.338Paramormyrops_kingsleyae
ENSELUG00000022291u2af2b10087.315ENSPKIG00000024346u2af2b10089.749Paramormyrops_kingsleyae
ENSELUG00000022291u2af2b8668.039ENSPSIG00000008014U2AF210064.482Pelodiscus_sinensis
ENSELUG00000022291u2af2b8584.788ENSPMGG00000022980u2af2a10082.379Periophthalmus_magnuspinnatus
ENSELUG00000022291u2af2b10082.600ENSPEMG00000007378U2af210091.234Peromyscus_maniculatus_bairdii
ENSELUG00000022291u2af2b8376.364ENSPMAG00000004097u2af2a10071.336Petromyzon_marinus
ENSELUG00000022291u2af2b10082.390ENSPCIG00000018013U2AF210082.390Phascolarctos_cinereus
ENSELUG00000022291u2af2b9985.624ENSPFOG00000010799u2af2a10086.709Poecilia_formosa
ENSELUG00000022291u2af2b9972.591ENSPFOG00000006433-10071.706Poecilia_formosa
ENSELUG00000022291u2af2b9574.023ENSPLAG00000003275-8878.109Poecilia_latipinna
ENSELUG00000022291u2af2b10085.654ENSPLAG00000014365u2af2a10088.745Poecilia_latipinna
ENSELUG00000022291u2af2b9574.483ENSPMEG00000003734-8877.612Poecilia_mexicana
ENSELUG00000022291u2af2b10085.654ENSPMEG00000002969u2af2a10088.745Poecilia_mexicana
ENSELUG00000022291u2af2b9971.097ENSPREG00000013036-10073.154Poecilia_reticulata
ENSELUG00000022291u2af2b10085.654ENSPREG00000008739u2af2a10089.414Poecilia_reticulata
ENSELUG00000022291u2af2b5989.818ENSPPYG00000010429-9489.818Pongo_abelii
ENSELUG00000022291u2af2b10067.782ENSPCAG00000014399-10067.782Procavia_capensis
ENSELUG00000022291u2af2b8675.696ENSPCAG00000003709-9675.696Procavia_capensis
ENSELUG00000022291u2af2b10082.600ENSPCOG00000025870U2AF210082.600Propithecus_coquereli
ENSELUG00000022291u2af2b10082.180ENSPVAG00000004540U2AF210082.180Pteropus_vampyrus
ENSELUG00000022291u2af2b10085.865ENSPNYG00000001438u2af2a10086.947Pundamilia_nyererei
ENSELUG00000022291u2af2b9971.882ENSPNYG00000011605-10071.975Pundamilia_nyererei
ENSELUG00000022291u2af2b10085.591ENSPNAG00000017620u2af2a10086.481Pygocentrus_nattereri
ENSELUG00000022291u2af2b9971.762ENSPNAG00000007182-10072.187Pygocentrus_nattereri
ENSELUG00000022291u2af2b9987.582ENSPNAG00000027289u2af2b9987.146Pygocentrus_nattereri
ENSELUG00000022291u2af2b10083.298ENSRNOG00000015914U2af210083.298Rattus_norvegicus
ENSELUG00000022291u2af2b10082.390ENSRBIG00000041018U2AF210082.390Rhinopithecus_bieti
ENSELUG00000022291u2af2b7689.577ENSRROG00000031103-10081.971Rhinopithecus_roxellana
ENSELUG00000022291u2af2b10080.000ENSRROG00000031238-10078.858Rhinopithecus_roxellana
ENSELUG00000022291u2af2b10083.298ENSSBOG00000023891U2AF210083.298Saimiri_boliviensis_boliviensis
ENSELUG00000022291u2af2b5277.465ENSSHAG00000001167U2AF26577.465Sarcophilus_harrisii
ENSELUG00000022291u2af2b8891.337ENSSFOG00015019182u2af2b9091.337Scleropages_formosus
ENSELUG00000022291u2af2b9971.789ENSSFOG00015003884-9577.889Scleropages_formosus
ENSELUG00000022291u2af2b9972.128ENSSMAG00000013779-10072.611Scophthalmus_maximus
ENSELUG00000022291u2af2b10087.419ENSSMAG00000012582u2af2a10088.769Scophthalmus_maximus
ENSELUG00000022291u2af2b9986.258ENSSDUG00000009457u2af2a10089.371Seriola_dumerili
ENSELUG00000022291u2af2b9568.399ENSSDUG00000021434-8673.660Seriola_dumerili
ENSELUG00000022291u2af2b10086.287ENSSLDG00000022742u2af2a10089.394Seriola_lalandi_dorsalis
ENSELUG00000022291u2af2b9470.299ENSSLDG00000016151-9073.660Seriola_lalandi_dorsalis
ENSELUG00000022291u2af2b10082.353ENSSPUG00000010229U2AF210082.773Sphenodon_punctatus
ENSELUG00000022291u2af2b10086.076ENSSPAG00000022519u2af2a10087.158Stegastes_partitus
ENSELUG00000022291u2af2b9972.093ENSSPAG00000005241-10072.187Stegastes_partitus
ENSELUG00000022291u2af2b10085.652ENSSSCG00000034815U2AF210085.870Sus_scrofa
ENSELUG00000022291u2af2b9784.009ENSTRUG00000005514u2af2a9887.640Takifugu_rubripes
ENSELUG00000022291u2af2b8778.055ENSTNIG00000011257-10072.354Tetraodon_nigroviridis
ENSELUG00000022291u2af2b10084.713ENSTNIG00000008106U2AF210086.837Tetraodon_nigroviridis
ENSELUG00000022291u2af2b7684.551ENSTBEG00000009104U2AF29686.236Tupaia_belangeri
ENSELUG00000022291u2af2b10082.600ENSTTRG00000000987U2AF210082.600Tursiops_truncatus
ENSELUG00000022291u2af2b8689.223ENSUAMG00000019883U2AF210082.276Ursus_americanus
ENSELUG00000022291u2af2b8689.223ENSUMAG00000024586U2AF210091.234Ursus_maritimus
ENSELUG00000022291u2af2b8690.127ENSVVUG00000006956U2AF26686.036Vulpes_vulpes
ENSELUG00000022291u2af2b10082.729ENSXETG00000019128u2af210083.582Xenopus_tropicalis
ENSELUG00000022291u2af2b8592.583ENSXCOG00000019406u2af2a10089.391Xiphophorus_couchianus
ENSELUG00000022291u2af2b10085.654ENSXMAG00000011979u2af2a10088.745Xiphophorus_maculatus
ENSELUG00000022291u2af2b9970.763ENSXMAG00000000768-9671.975Xiphophorus_maculatus

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