EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000022519 (Gene tree)
Gene ID: 105028015
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 6892 bases
Position: chrLG04:5347955-5354846
Accession: 105028015
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000023672	MIF4G_like	PF09088.11	4.5e-36	1	1
ENSELUP00000023683	MIF4G_like	PF09088.11	4.9e-36	1	1
ENSELUP00000023672	MIF4G_like_2	PF09090.11	2e-88	1	1
ENSELUP00000023683	MIF4G_like_2	PF09090.11	3.6e-88	1	1
ENSELUP00000023683	MIF4G	PF02854.19	3e-27	1	1
ENSELUP00000023672	MIF4G	PF02854.19	9.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000034918	NCBP1-201	2491	-	ENSELUP00000023672	768 (aa)	-	-
ENSELUT00000034927	NCBP1-202	2391	XM_010900446	ENSELUP00000023683	796 (aa)	XP_010898748	UPI000577C564

Gene Model

Click here to download ENSELUG00000022519's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03013	RNA transport	KEGG
els03015	mRNA surveillance pathway	KEGG
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000022519's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000022519	NCBP1	99	81.635	ENSG00000136937	NCBP1	99	80.881	Homo_sapiens
ENSELUG00000022519	NCBP1	100	92.337	ENSAPOG00000008002	NCBP1	100	92.337	Acanthochromis_polyacanthus
ENSELUG00000022519	NCBP1	99	81.556	ENSAMEG00000004763	NCBP1	99	80.803	Ailuropoda_melanoleuca
ENSELUG00000022519	NCBP1	100	91.080	ENSACIG00000000274	NCBP1	100	91.080	Amphilophus_citrinellus
ENSELUG00000022519	NCBP1	100	91.960	ENSAOCG00000021148	NCBP1	100	91.960	Amphiprion_ocellaris
ENSELUG00000022519	NCBP1	100	91.960	ENSAPEG00000001701	NCBP1	100	91.960	Amphiprion_percula
ENSELUG00000022519	NCBP1	100	91.834	ENSATEG00000006929	NCBP1	100	91.834	Anabas_testudineus
ENSELUG00000022519	NCBP1	98	81.997	ENSAPLG00000016318	NCBP1	99	81.472	Anas_platyrhynchos
ENSELUG00000022519	NCBP1	99	82.000	ENSACAG00000004409	NCBP1	87	82.125	Anolis_carolinensis
ENSELUG00000022519	NCBP1	99	81.662	ENSANAG00000025744	NCBP1	99	80.441	Aotus_nancymaae
ENSELUG00000022519	NCBP1	100	91.206	ENSACLG00000014812	NCBP1	100	91.206	Astatotilapia_calliptera
ENSELUG00000022519	NCBP1	100	91.343	ENSAMXG00000016364	NCBP1	100	91.343	Astyanax_mexicanus
ENSELUG00000022519	NCBP1	99	81.509	ENSBTAG00000009732	NCBP1	99	86.405	Bos_taurus
ENSELUG00000022519	NCBP1	100	37.363	WBGene00018156	ncbp-1	100	36.874	Caenorhabditis_elegans
ENSELUG00000022519	NCBP1	99	81.635	ENSCJAG00000010840	NCBP1	98	86.650	Callithrix_jacchus
ENSELUG00000022519	NCBP1	99	81.761	ENSCAFG00000002445	NCBP1	99	81.006	Canis_familiaris
ENSELUG00000022519	NCBP1	98	81.987	ENSCAFG00020017997	NCBP1	96	88.279	Canis_lupus_dingo
ENSELUG00000022519	NCBP1	99	81.384	ENSCHIG00000020139	NCBP1	99	80.629	Capra_hircus
ENSELUG00000022519	NCBP1	51	86.978	ENSTSYG00000011914	NCBP1	98	86.520	Carlito_syrichta
ENSELUG00000022519	NCBP1	84	74.652	ENSCAPG00000014252	NCBP1	90	73.261	Cavia_aperea
ENSELUG00000022519	NCBP1	98	81.854	ENSCPOG00000012573	NCBP1	98	81.060	Cavia_porcellus
ENSELUG00000022519	NCBP1	99	81.635	ENSCCAG00000032297	NCBP1	99	80.881	Cebus_capucinus
ENSELUG00000022519	NCBP1	99	81.635	ENSCATG00000010052	NCBP1	99	80.881	Cercocebus_atys
ENSELUG00000022519	NCBP1	99	81.761	ENSCLAG00000014339	NCBP1	99	81.006	Chinchilla_lanigera
ENSELUG00000022519	NCBP1	99	81.635	ENSCSAG00000010929	NCBP1	99	80.881	Chlorocebus_sabaeus
ENSELUG00000022519	NCBP1	89	82.075	ENSCHOG00000010332	NCBP1	91	78.261	Choloepus_hoffmanni
ENSELUG00000022519	NCBP1	99	80.755	ENSCPBG00000024344	NCBP1	99	82.231	Chrysemys_picta_bellii
ENSELUG00000022519	NCBP1	99	54.088	ENSCING00000008990	-	99	53.585	Ciona_intestinalis
ENSELUG00000022519	NCBP1	99	53.808	ENSCSAVG00000005300	-	99	55.385	Ciona_savignyi
ENSELUG00000022519	NCBP1	99	81.635	ENSCANG00000036913	NCBP1	99	80.881	Colobus_angolensis_palliatus
ENSELUG00000022519	NCBP1	99	80.755	ENSCGRG00001015771	Ncbp1	99	80.000	Cricetulus_griseus_chok1gshd
ENSELUG00000022519	NCBP1	99	80.892	ENSCGRG00000010311	Ncbp1	99	80.127	Cricetulus_griseus_crigri
ENSELUG00000022519	NCBP1	100	91.457	ENSCSEG00000012377	NCBP1	100	91.457	Cynoglossus_semilaevis
ENSELUG00000022519	NCBP1	100	90.590	ENSCVAG00000008795	NCBP1	100	90.590	Cyprinodon_variegatus
ENSELUG00000022519	NCBP1	99	80.629	ENSDNOG00000006885	NCBP1	99	79.874	Dasypus_novemcinctus
ENSELUG00000022519	NCBP1	99	77.222	ENSDORG00000013652	Ncbp1	99	76.471	Dipodomys_ordii
ENSELUG00000022519	NCBP1	82	34.315	FBgn0038887	CG7907	87	34.315	Drosophila_melanogaster
ENSELUG00000022519	NCBP1	99	56.821	FBgn0022942	Cbp80	99	56.000	Drosophila_melanogaster
ENSELUG00000022519	NCBP1	89	77.322	ENSETEG00000009705	NCBP1	89	75.378	Echinops_telfairi
ENSELUG00000022519	NCBP1	99	72.236	ENSEBUG00000008386	NCBP1	99	72.236	Eptatretus_burgeri
ENSELUG00000022519	NCBP1	99	81.258	ENSEASG00005022795	NCBP1	99	80.503	Equus_asinus_asinus
ENSELUG00000022519	NCBP1	99	81.384	ENSECAG00000013847	NCBP1	99	80.629	Equus_caballus
ENSELUG00000022519	NCBP1	95	77.968	ENSEEUG00000015973	NCBP1	99	77.177	Erinaceus_europaeus
ENSELUG00000022519	NCBP1	99	81.635	ENSFCAG00000001206	NCBP1	99	80.881	Felis_catus
ENSELUG00000022519	NCBP1	98	82.824	ENSFALG00000001193	NCBP1	99	82.061	Ficedula_albicollis
ENSELUG00000022519	NCBP1	99	81.509	ENSFDAG00000010864	NCBP1	99	80.755	Fukomys_damarensis
ENSELUG00000022519	NCBP1	100	90.590	ENSFHEG00000000655	NCBP1	100	90.590	Fundulus_heteroclitus
ENSELUG00000022519	NCBP1	100	90.704	ENSGMOG00000008653	NCBP1	99	90.704	Gadus_morhua
ENSELUG00000022519	NCBP1	98	82.759	ENSGALG00000002087	NCBP1	99	82.058	Gallus_gallus
ENSELUG00000022519	NCBP1	100	91.092	ENSGAFG00000017787	NCBP1	100	91.092	Gambusia_affinis
ENSELUG00000022519	NCBP1	100	89.850	ENSGACG00000016772	NCBP1	99	89.850	Gasterosteus_aculeatus
ENSELUG00000022519	NCBP1	99	83.522	ENSGAGG00000019483	NCBP1	99	82.767	Gopherus_agassizii
ENSELUG00000022519	NCBP1	99	81.635	ENSGGOG00000001376	NCBP1	99	80.881	Gorilla_gorilla
ENSELUG00000022519	NCBP1	100	91.206	ENSHBUG00000020843	NCBP1	100	91.206	Haplochromis_burtoni
ENSELUG00000022519	NCBP1	99	81.761	ENSHGLG00000001882	NCBP1	99	81.006	Heterocephalus_glaber_female
ENSELUG00000022519	NCBP1	99	71.267	ENSHGLG00000018112	-	99	71.267	Heterocephalus_glaber_female
ENSELUG00000022519	NCBP1	99	71.016	ENSHGLG00100017373	-	99	71.016	Heterocephalus_glaber_male
ENSELUG00000022519	NCBP1	99	81.761	ENSHGLG00100013014	NCBP1	99	81.006	Heterocephalus_glaber_male
ENSELUG00000022519	NCBP1	77	84.317	ENSHCOG00000000204	NCBP1	87	84.317	Hippocampus_comes
ENSELUG00000022519	NCBP1	100	91.206	ENSIPUG00000007275	ncbp1	100	91.206	Ictalurus_punctatus
ENSELUG00000022519	NCBP1	99	81.509	ENSSTOG00000002695	NCBP1	99	80.755	Ictidomys_tridecemlineatus
ENSELUG00000022519	NCBP1	100	90.452	ENSKMAG00000003594	NCBP1	99	92.261	Kryptolebias_marmoratus
ENSELUG00000022519	NCBP1	100	89.963	ENSLBEG00000011661	NCBP1	100	89.963	Labrus_bergylta
ENSELUG00000022519	NCBP1	99	77.958	ENSLACG00000013955	NCBP1	99	77.958	Latimeria_chalumnae
ENSELUG00000022519	NCBP1	99	77.114	ENSLOCG00000009579	NCBP1	99	77.114	Lepisosteus_oculatus
ENSELUG00000022519	NCBP1	99	81.509	ENSLAFG00000005999	NCBP1	99	80.755	Loxodonta_africana
ENSELUG00000022519	NCBP1	99	81.635	ENSMFAG00000030994	NCBP1	99	80.881	Macaca_fascicularis
ENSELUG00000022519	NCBP1	99	81.321	ENSMMUG00000012281	NCBP1	99	80.867	Macaca_mulatta
ENSELUG00000022519	NCBP1	99	81.635	ENSMNEG00000042790	NCBP1	99	80.881	Macaca_nemestrina
ENSELUG00000022519	NCBP1	99	81.635	ENSMLEG00000030374	NCBP1	99	80.881	Mandrillus_leucophaeus
ENSELUG00000022519	NCBP1	100	91.080	ENSMAMG00000014806	NCBP1	100	91.080	Mastacembelus_armatus
ENSELUG00000022519	NCBP1	100	91.206	ENSMZEG00005003469	NCBP1	100	91.206	Maylandia_zebra
ENSELUG00000022519	NCBP1	98	89.418	ENSMZEG00005009290	-	100	89.806	Maylandia_zebra
ENSELUG00000022519	NCBP1	99	80.405	ENSMAUG00000020583	Ncbp1	99	79.646	Mesocricetus_auratus
ENSELUG00000022519	NCBP1	99	81.132	ENSMICG00000012682	NCBP1	99	80.377	Microcebus_murinus
ENSELUG00000022519	NCBP1	99	80.629	ENSMOCG00000015818	Ncbp1	99	79.874	Microtus_ochrogaster
ENSELUG00000022519	NCBP1	94	90.443	ENSMMOG00000002610	NCBP1	100	90.443	Mola_mola
ENSELUG00000022519	NCBP1	99	80.755	ENSMODG00000003202	NCBP1	99	79.874	Monodelphis_domestica
ENSELUG00000022519	NCBP1	100	91.960	ENSMALG00000003547	NCBP1	100	91.960	Monopterus_albus
ENSELUG00000022519	NCBP1	99	81.006	MGP_CAROLIEiJ_G0025982	Ncbp1	99	80.252	Mus_caroli
ENSELUG00000022519	NCBP1	99	81.006	ENSMUSG00000028330	Ncbp1	99	80.252	Mus_musculus
ENSELUG00000022519	NCBP1	99	81.006	MGP_PahariEiJ_G0028318	Ncbp1	99	80.252	Mus_pahari
ENSELUG00000022519	NCBP1	99	81.006	MGP_SPRETEiJ_G0026945	Ncbp1	99	80.252	Mus_spretus
ENSELUG00000022519	NCBP1	99	81.887	ENSMPUG00000006399	NCBP1	99	81.132	Mustela_putorius_furo
ENSELUG00000022519	NCBP1	98	81.060	ENSMLUG00000015201	NCBP1	99	79.974	Myotis_lucifugus
ENSELUG00000022519	NCBP1	99	81.509	ENSNGAG00000014101	Ncbp1	99	80.377	Nannospalax_galili
ENSELUG00000022519	NCBP1	74	94.714	ENSNBRG00000014674	NCBP1	94	94.714	Neolamprologus_brichardi
ENSELUG00000022519	NCBP1	99	81.635	ENSNLEG00000016909	NCBP1	99	80.881	Nomascus_leucogenys
ENSELUG00000022519	NCBP1	89	80.585	ENSMEUG00000010672	NCBP1	90	80.585	Notamacropus_eugenii
ENSELUG00000022519	NCBP1	82	85.294	ENSOPRG00000002144	-	83	85.294	Ochotona_princeps
ENSELUG00000022519	NCBP1	99	81.761	ENSODEG00000003232	NCBP1	99	81.006	Octodon_degus
ENSELUG00000022519	NCBP1	100	90.955	ENSONIG00000001502	NCBP1	100	90.955	Oreochromis_niloticus
ENSELUG00000022519	NCBP1	78	84.430	ENSOANG00000001918	NCBP1	100	84.430	Ornithorhynchus_anatinus
ENSELUG00000022519	NCBP1	98	81.050	ENSOCUG00000013853	NCBP1	97	80.282	Oryctolagus_cuniculus
ENSELUG00000022519	NCBP1	100	89.987	ENSORLG00000011008	NCBP1	100	89.987	Oryzias_latipes
ENSELUG00000022519	NCBP1	100	89.862	ENSORLG00020017455	NCBP1	100	89.862	Oryzias_latipes_hni
ENSELUG00000022519	NCBP1	100	89.987	ENSORLG00015012127	NCBP1	100	89.987	Oryzias_latipes_hsok
ENSELUG00000022519	NCBP1	100	90.363	ENSOMEG00000020698	NCBP1	100	90.363	Oryzias_melastigma
ENSELUG00000022519	NCBP1	99	81.430	ENSOGAG00000013888	NCBP1	99	80.678	Otolemur_garnettii
ENSELUG00000022519	NCBP1	99	81.384	ENSOARG00000011233	NCBP1	99	80.629	Ovis_aries
ENSELUG00000022519	NCBP1	99	81.635	ENSPPAG00000026462	NCBP1	99	80.881	Pan_paniscus
ENSELUG00000022519	NCBP1	99	81.761	ENSPPRG00000022574	NCBP1	99	81.006	Panthera_pardus
ENSELUG00000022519	NCBP1	99	81.761	ENSPTIG00000018507	NCBP1	99	81.006	Panthera_tigris_altaica
ENSELUG00000022519	NCBP1	99	81.635	ENSPTRG00000021167	NCBP1	99	80.881	Pan_troglodytes
ENSELUG00000022519	NCBP1	99	81.635	ENSPANG00000025591	NCBP1	99	80.881	Papio_anubis
ENSELUG00000022519	NCBP1	99	89.057	ENSPKIG00000015861	NCBP1	99	89.057	Paramormyrops_kingsleyae
ENSELUG00000022519	NCBP1	67	81.445	ENSPSIG00000009558	NCBP1	99	80.273	Pelodiscus_sinensis
ENSELUG00000022519	NCBP1	100	86.324	ENSPMGG00000020476	NCBP1	100	86.324	Periophthalmus_magnuspinnatus
ENSELUG00000022519	NCBP1	99	80.503	ENSPEMG00000020105	Ncbp1	99	79.748	Peromyscus_maniculatus_bairdii
ENSELUG00000022519	NCBP1	99	67.738	ENSPMAG00000005533	NCBP1	99	66.996	Petromyzon_marinus
ENSELUG00000022519	NCBP1	99	80.755	ENSPCIG00000015800	NCBP1	99	83.260	Phascolarctos_cinereus
ENSELUG00000022519	NCBP1	100	90.613	ENSPFOG00000004158	NCBP1	100	90.613	Poecilia_formosa
ENSELUG00000022519	NCBP1	100	90.841	ENSPLAG00000020002	NCBP1	100	90.841	Poecilia_latipinna
ENSELUG00000022519	NCBP1	100	90.841	ENSPMEG00000019821	NCBP1	100	90.841	Poecilia_mexicana
ENSELUG00000022519	NCBP1	100	90.841	ENSPREG00000006035	NCBP1	100	90.841	Poecilia_reticulata
ENSELUG00000022519	NCBP1	99	81.635	ENSPPYG00000019426	NCBP1	99	80.881	Pongo_abelii
ENSELUG00000022519	NCBP1	88	87.586	ENSPCAG00000009943	NCBP1	84	87.586	Procavia_capensis
ENSELUG00000022519	NCBP1	85	87.500	ENSPCOG00000020024	NCBP1	98	87.500	Propithecus_coquereli
ENSELUG00000022519	NCBP1	99	81.384	ENSPVAG00000005924	NCBP1	99	80.629	Pteropus_vampyrus
ENSELUG00000022519	NCBP1	94	90.153	ENSPNYG00000002140	NCBP1	99	90.153	Pundamilia_nyererei
ENSELUG00000022519	NCBP1	100	90.464	ENSPNAG00000027753	NCBP1	100	90.464	Pygocentrus_nattereri
ENSELUG00000022519	NCBP1	99	81.006	ENSRNOG00000023605	Ncbp1	99	80.252	Rattus_norvegicus
ENSELUG00000022519	NCBP1	99	81.635	ENSRBIG00000043175	NCBP1	99	80.881	Rhinopithecus_bieti
ENSELUG00000022519	NCBP1	99	81.635	ENSRROG00000029767	NCBP1	99	80.881	Rhinopithecus_roxellana
ENSELUG00000022519	NCBP1	99	81.635	ENSSBOG00000019378	NCBP1	96	87.811	Saimiri_boliviensis_boliviensis
ENSELUG00000022519	NCBP1	69	76.806	ENSSHAG00000015882	NCBP1	72	74.144	Sarcophilus_harrisii
ENSELUG00000022519	NCBP1	98	87.500	ENSSFOG00015001872	NCBP1	99	86.792	Scleropages_formosus
ENSELUG00000022519	NCBP1	100	91.583	ENSSMAG00000007463	NCBP1	100	91.583	Scophthalmus_maximus
ENSELUG00000022519	NCBP1	100	91.080	ENSSDUG00000007019	NCBP1	100	91.370	Seriola_dumerili
ENSELUG00000022519	NCBP1	100	91.583	ENSSLDG00000021924	NCBP1	100	91.583	Seriola_lalandi_dorsalis
ENSELUG00000022519	NCBP1	85	70.194	ENSSARG00000007274	NCBP1	86	68.898	Sorex_araneus
ENSELUG00000022519	NCBP1	99	76.478	ENSSPUG00000008609	NCBP1	99	75.975	Sphenodon_punctatus
ENSELUG00000022519	NCBP1	100	92.588	ENSSPAG00000012550	NCBP1	100	92.588	Stegastes_partitus
ENSELUG00000022519	NCBP1	99	81.761	ENSSSCG00000005366	NCBP1	99	81.006	Sus_scrofa
ENSELUG00000022519	NCBP1	99	77.736	ENSTGUG00000001472	NCBP1	99	77.233	Taeniopygia_guttata
ENSELUG00000022519	NCBP1	100	90.201	ENSTRUG00000005287	NCBP1	100	90.201	Takifugu_rubripes
ENSELUG00000022519	NCBP1	99	79.371	ENSTBEG00000004035	NCBP1	99	78.616	Tupaia_belangeri
ENSELUG00000022519	NCBP1	86	85.890	ENSTTRG00000000507	NCBP1	88	83.744	Tursiops_truncatus
ENSELUG00000022519	NCBP1	99	81.635	ENSUAMG00000005471	NCBP1	99	80.881	Ursus_americanus
ENSELUG00000022519	NCBP1	98	80.265	ENSUMAG00000011865	NCBP1	99	80.378	Ursus_maritimus
ENSELUG00000022519	NCBP1	99	78.113	ENSVPAG00000010537	NCBP1	99	77.358	Vicugna_pacos
ENSELUG00000022519	NCBP1	99	81.761	ENSVVUG00000019725	NCBP1	99	81.006	Vulpes_vulpes
ENSELUG00000022519	NCBP1	99	78.994	ENSXETG00000010179	ncbp1	99	78.994	Xenopus_tropicalis
ENSELUG00000022519	NCBP1	100	91.092	ENSXMAG00000018253	NCBP1	100	91.092	Xiphophorus_maculatus