EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000022654 (Gene tree)
Gene ID
105019495
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Minus strand
Length
12605 bases
Position
chrLG21:13434794-13447398
Accession
105019495
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000041705RRM_1PF00076.222.5e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000035109-5809XM_010885730ENSELUP00000041705237 (aa)XP_010884032UPI000577A088
Gene Model
Click here to download ENSELUG00000022654's gene model file
Pathways
Pathway IDPathway NameSource
els03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000022654's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000022654pabpn16269.128ENSELUG00000018385PABPN1L6765.714
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000022654pabpn18585.437ENSG00000100836PABPN19485.714Homo_sapiens
ENSELUG00000022654pabpn17987.368ENSG00000258643BCL2L2-PABPN15787.368Homo_sapiens
ENSELUG00000022654pabpn110094.515ENSAPOG00000016425pabpn110094.515Acanthochromis_polyacanthus
ENSELUG00000022654pabpn17987.368ENSAMEG00000007048BCL2L2-PABPN110087.368Ailuropoda_melanoleuca
ENSELUG00000022654pabpn19593.363ENSACIG00000021744pabpn110096.045Amphilophus_citrinellus
ENSELUG00000022654pabpn110094.515ENSAOCG00000015805pabpn110094.515Amphiprion_ocellaris
ENSELUG00000022654pabpn110094.515ENSAPEG00000009623pabpn110094.515Amphiprion_percula
ENSELUG00000022654pabpn110094.937ENSATEG00000020531pabpn110094.937Anabas_testudineus
ENSELUG00000022654pabpn17986.842ENSACAG00000006185-7481.429Anolis_carolinensis
ENSELUG00000022654pabpn18386.869ENSANAG00000024513-8478.926Aotus_nancymaae
ENSELUG00000022654pabpn19592.952ENSACLG00000016374pabpn17592.727Astatotilapia_calliptera
ENSELUG00000022654pabpn110095.359ENSAMXG00000000452pabpn110097.175Astyanax_mexicanus
ENSELUG00000022654pabpn17387.931ENSBTAG00000050594-7486.022Bos_taurus
ENSELUG00000022654pabpn18386.869ENSBTAG00000006884PABPN18672.348Bos_taurus
ENSELUG00000022654pabpn18085.938ENSBTAG00000053753-7185.938Bos_taurus
ENSELUG00000022654pabpn16060.274WBGene00003904pabp-27558.861Caenorhabditis_elegans
ENSELUG00000022654pabpn18585.437ENSCJAG00000007960-8478.059Callithrix_jacchus
ENSELUG00000022654pabpn17083.929ENSCJAG00000004407-8483.929Callithrix_jacchus
ENSELUG00000022654pabpn18585.437ENSCAFG00000011482PABPN18673.864Canis_familiaris
ENSELUG00000022654pabpn18585.437ENSCAFG00020006651-8673.485Canis_lupus_dingo
ENSELUG00000022654pabpn18585.437ENSCAFG00020007298-8673.485Canis_lupus_dingo
ENSELUG00000022654pabpn18585.437ENSCHIG00000012184PABPN18673.485Capra_hircus
ENSELUG00000022654pabpn17987.368ENSTSYG00000033996BCL2L2-PABPN19485.714Carlito_syrichta
ENSELUG00000022654pabpn15985.612ENSCAPG00000009461-9189.062Cavia_aperea
ENSELUG00000022654pabpn18584.951ENSCPOG00000025574PABPN18672.727Cavia_porcellus
ENSELUG00000022654pabpn18585.437ENSCCAG00000033954BCL2L2-PABPN18478.059Cebus_capucinus
ENSELUG00000022654pabpn18585.437ENSCATG00000038536BCL2L2-PABPN18478.059Cercocebus_atys
ENSELUG00000022654pabpn16485.430ENSCLAG00000012423PABPN15685.430Chinchilla_lanigera
ENSELUG00000022654pabpn18583.981ENSCSAG00000016036PABPN18672.348Chlorocebus_sabaeus
ENSELUG00000022654pabpn18875.238ENSCHOG00000004798BCL2L2-PABPN19273.182Choloepus_hoffmanni
ENSELUG00000022654pabpn17085.714ENSCPBG00000026060-9485.714Chrysemys_picta_bellii
ENSELUG00000022654pabpn18863.679ENSCING00000012468-8960.377Ciona_intestinalis
ENSELUG00000022654pabpn17560.335ENSCSAVG00000002001-9359.524Ciona_savignyi
ENSELUG00000022654pabpn18473.737ENSCANG00000030980-8766.390Colobus_angolensis_palliatus
ENSELUG00000022654pabpn17987.368ENSCANG00000009750BCL2L2-PABPN19485.714Colobus_angolensis_palliatus
ENSELUG00000022654pabpn18584.951ENSCGRG00001019696Pabpn19485.119Cricetulus_griseus_chok1gshd
ENSELUG00000022654pabpn17085.119ENSCGRG00000011102Pabpn19193.878Cricetulus_griseus_crigri
ENSELUG00000022654pabpn110094.093ENSCSEG00000008774pabpn110094.093Cynoglossus_semilaevis
ENSELUG00000022654pabpn110087.815ENSCVAG00000003152pabpn110090.336Cyprinodon_variegatus
ENSELUG00000022654pabpn110094.937ENSDARG00000045373pabpn110094.937Danio_rerio
ENSELUG00000022654pabpn17954.255ENSDARG00000087996pabpn1l7269.231Danio_rerio
ENSELUG00000022654pabpn18585.437ENSDNOG00000023682PABPN18673.485Dasypus_novemcinctus
ENSELUG00000022654pabpn18584.466ENSDORG00000028966-8672.727Dipodomys_ordii
ENSELUG00000022654pabpn15585.714ENSDORG00000023928-8585.246Dipodomys_ordii
ENSELUG00000022654pabpn19757.872FBgn0005648Pabp29059.434Drosophila_melanogaster
ENSELUG00000022654pabpn19971.186ENSEBUG00000002322pabpn19971.186Eptatretus_burgeri
ENSELUG00000022654pabpn18585.437ENSEASG00005011716PABPN18673.485Equus_asinus_asinus
ENSELUG00000022654pabpn18484.804ENSECAG00000011652PABPN18173.967Equus_caballus
ENSELUG00000022654pabpn18583.010ENSEEUG00000012973-7178.947Erinaceus_europaeus
ENSELUG00000022654pabpn18585.437ENSFCAG00000031922PABPN18673.485Felis_catus
ENSELUG00000022654pabpn17085.714ENSFDAG00000018381BCL2L2-PABPN19485.714Fukomys_damarensis
ENSELUG00000022654pabpn110091.561ENSFHEG00000007215pabpn110091.561Fundulus_heteroclitus
ENSELUG00000022654pabpn19593.778ENSGMOG00000003922pabpn17593.548Gadus_morhua
ENSELUG00000022654pabpn18285.354ENSGALG00000052930-6183.886Gallus_gallus
ENSELUG00000022654pabpn110093.697ENSGAFG00000017099pabpn110093.697Gambusia_affinis
ENSELUG00000022654pabpn110089.243ENSGACG00000002167pabpn110089.243Gasterosteus_aculeatus
ENSELUG00000022654pabpn19267.949ENSGGOG00000025919-9871.141Gorilla_gorilla
ENSELUG00000022654pabpn18772.115ENSGGOG00000039675-9167.917Gorilla_gorilla
ENSELUG00000022654pabpn18585.437ENSGGOG00000022683-8478.059Gorilla_gorilla
ENSELUG00000022654pabpn110094.937ENSHBUG00000019523pabpn110094.937Haplochromis_burtoni
ENSELUG00000022654pabpn18584.951ENSHGLG00000002927-9293.878Heterocephalus_glaber_female
ENSELUG00000022654pabpn17066.071ENSHGLG00000009842-9366.071Heterocephalus_glaber_female
ENSELUG00000022654pabpn18671.635ENSHGLG00000018588-7076.190Heterocephalus_glaber_female
ENSELUG00000022654pabpn18671.635ENSHGLG00100015565-7176.190Heterocephalus_glaber_male
ENSELUG00000022654pabpn17487.079ENSHGLG00100006673-9293.878Heterocephalus_glaber_male
ENSELUG00000022654pabpn17075.581ENSHGLG00100018935-9475.581Heterocephalus_glaber_male
ENSELUG00000022654pabpn110091.139ENSHCOG00000004655pabpn110088.608Hippocampus_comes
ENSELUG00000022654pabpn110094.515ENSIPUG00000008085PABPN110094.515Ictalurus_punctatus
ENSELUG00000022654pabpn110086.920ENSIPUG00000000180-9986.920Ictalurus_punctatus
ENSELUG00000022654pabpn17085.714ENSSTOG00000029847BCL2L2-PABPN19485.714Ictidomys_tridecemlineatus
ENSELUG00000022654pabpn17085.714ENSJJAG00000023507Gm205219485.714Jaculus_jaculus
ENSELUG00000022654pabpn110092.857ENSKMAG00000018748pabpn110091.176Kryptolebias_marmoratus
ENSELUG00000022654pabpn110094.937ENSLBEG00000027266pabpn110094.937Labrus_bergylta
ENSELUG00000022654pabpn17487.709ENSLACG00000000646pabpn18184.946Latimeria_chalumnae
ENSELUG00000022654pabpn19593.333ENSLOCG00000000796pabpn17793.088Lepisosteus_oculatus
ENSELUG00000022654pabpn18966.512ENSLOCG00000004694pabpn1l9966.512Lepisosteus_oculatus
ENSELUG00000022654pabpn16486.184ENSLAFG00000031227-10086.184Loxodonta_africana
ENSELUG00000022654pabpn17987.368ENSMFAG00000032183BCL2L2-PABPN19485.714Macaca_fascicularis
ENSELUG00000022654pabpn16078.169ENSMFAG00000031355-9978.169Macaca_fascicularis
ENSELUG00000022654pabpn18470.732ENSMMUG00000048382-8960.595Macaca_mulatta
ENSELUG00000022654pabpn19775.536ENSMMUG00000014747BCL2L2-PABPN110085.714Macaca_mulatta
ENSELUG00000022654pabpn17872.043ENSMNEG00000035750-9978.169Macaca_nemestrina
ENSELUG00000022654pabpn18585.437ENSMNEG00000045065BCL2L2-PABPN18478.059Macaca_nemestrina
ENSELUG00000022654pabpn17068.862ENSMLEG00000034623-9976.056Mandrillus_leucophaeus
ENSELUG00000022654pabpn17987.368ENSMLEG00000043862BCL2L2-PABPN19485.714Mandrillus_leucophaeus
ENSELUG00000022654pabpn19994.444ENSMAMG00000007979pabpn17994.444Mastacembelus_armatus
ENSELUG00000022654pabpn19594.667ENSMZEG00005011904pabpn17594.470Maylandia_zebra
ENSELUG00000022654pabpn18584.951ENSMAUG00000007383Gm205218773.462Mesocricetus_auratus
ENSELUG00000022654pabpn19978.059ENSMICG00000010002BCL2L2-PABPN18478.750Microcebus_murinus
ENSELUG00000022654pabpn18584.466ENSMOCG00000018557Gm205219093.878Microtus_ochrogaster
ENSELUG00000022654pabpn110095.359ENSMMOG00000005405pabpn110095.359Mola_mola
ENSELUG00000022654pabpn18483.744ENSMODG00000004535-7972.727Monodelphis_domestica
ENSELUG00000022654pabpn19994.017ENSMALG00000019612pabpn17894.017Monopterus_albus
ENSELUG00000022654pabpn17985.789MGP_CAROLIEiJ_G0019276Gm205215785.789Mus_caroli
ENSELUG00000022654pabpn18583.981MGP_CAROLIEiJ_G0019277Pabpn19093.197Mus_caroli
ENSELUG00000022654pabpn18584.466ENSMUSG00000022194Pabpn19093.197Mus_musculus
ENSELUG00000022654pabpn17986.316ENSMUSG00000092232Gm205215786.316Mus_musculus
ENSELUG00000022654pabpn17986.316MGP_PahariEiJ_G0030294Gm205215786.316Mus_pahari
ENSELUG00000022654pabpn18584.466MGP_PahariEiJ_G0030295Pabpn110097.619Mus_pahari
ENSELUG00000022654pabpn18584.466MGP_SPRETEiJ_G0020166Pabpn19093.197Mus_spretus
ENSELUG00000022654pabpn17986.316MGP_SPRETEiJ_G0020165Gm205215786.316Mus_spretus
ENSELUG00000022654pabpn16585.897ENSMPUG00000006775-8788.356Mustela_putorius_furo
ENSELUG00000022654pabpn18384.343ENSMLUG00000028677-8278.125Myotis_lucifugus
ENSELUG00000022654pabpn17986.316ENSMLUG00000003800-10086.316Myotis_lucifugus
ENSELUG00000022654pabpn18682.381ENSMLUG00000012452-8273.413Myotis_lucifugus
ENSELUG00000022654pabpn17987.368ENSNGAG00000019529Gm205215787.368Nannospalax_galili
ENSELUG00000022654pabpn19594.667ENSNBRG00000023955pabpn110096.045Neolamprologus_brichardi
ENSELUG00000022654pabpn16363.087ENSNLEG00000035292-9963.087Nomascus_leucogenys
ENSELUG00000022654pabpn18570.874ENSNLEG00000030598-7769.524Nomascus_leucogenys
ENSELUG00000022654pabpn18585.437ENSNLEG00000015007-7485.167Nomascus_leucogenys
ENSELUG00000022654pabpn18575.490ENSODEG00000003739-8865.370Octodon_degus
ENSELUG00000022654pabpn18584.951ENSODEG00000002083BCL2L2-PABPN18672.727Octodon_degus
ENSELUG00000022654pabpn17575.419ENSODEG00000011555-8974.405Octodon_degus
ENSELUG00000022654pabpn19594.667ENSONIG00000008112pabpn17594.470Oreochromis_niloticus
ENSELUG00000022654pabpn16287.075ENSOANG00000009218-10087.075Ornithorhynchus_anatinus
ENSELUG00000022654pabpn18584.951ENSOCUG00000016174PABPN19573.462Oryctolagus_cuniculus
ENSELUG00000022654pabpn19994.017ENSORLG00000027900pabpn19094.009Oryzias_latipes
ENSELUG00000022654pabpn19994.017ENSORLG00020004681pabpn17894.017Oryzias_latipes_hni
ENSELUG00000022654pabpn110094.515ENSORLG00015000018pabpn110094.515Oryzias_latipes_hsok
ENSELUG00000022654pabpn19593.778ENSOMEG00000016618pabpn17993.548Oryzias_melastigma
ENSELUG00000022654pabpn18585.437ENSOGAG00000008710PABPN18673.485Otolemur_garnettii
ENSELUG00000022654pabpn17987.368ENSOARG00000019336BCL2L2-PABPN15287.368Ovis_aries
ENSELUG00000022654pabpn17987.368ENSPPAG00000028984BCL2L2-PABPN18788.356Pan_paniscus
ENSELUG00000022654pabpn17070.482ENSPPAG00000039421-9370.482Pan_paniscus
ENSELUG00000022654pabpn18585.437ENSPPRG00000010567PABPN18673.485Panthera_pardus
ENSELUG00000022654pabpn17085.714ENSPTIG00000001063BCL2L2-PABPN19485.714Panthera_tigris_altaica
ENSELUG00000022654pabpn110065.126ENSPTRG00000047273-9362.698Pan_troglodytes
ENSELUG00000022654pabpn18585.437ENSPTRG00000006167BCL2L28478.059Pan_troglodytes
ENSELUG00000022654pabpn18372.222ENSPANG00000023326-9978.873Papio_anubis
ENSELUG00000022654pabpn18585.437ENSPANG00000021100BCL2L2-PABPN18478.059Papio_anubis
ENSELUG00000022654pabpn17070.482ENSPKIG00000008340pabpn1l8468.786Paramormyrops_kingsleyae
ENSELUG00000022654pabpn19993.590ENSPKIG00000008144-7893.590Paramormyrops_kingsleyae
ENSELUG00000022654pabpn110092.827ENSPKIG00000018052pabpn110092.827Paramormyrops_kingsleyae
ENSELUG00000022654pabpn19593.333ENSPMGG00000022027pabpn17893.088Periophthalmus_magnuspinnatus
ENSELUG00000022654pabpn18584.951ENSPEMG00000008332Gm205218993.878Peromyscus_maniculatus_bairdii
ENSELUG00000022654pabpn17976.316ENSPMAG00000006212pabpn19667.364Petromyzon_marinus
ENSELUG00000022654pabpn18584.466ENSPCIG00000027751-8672.727Phascolarctos_cinereus
ENSELUG00000022654pabpn110089.916ENSPFOG00000010351pabpn19992.437Poecilia_formosa
ENSELUG00000022654pabpn19992.766ENSPLAG00000022696pabpn17992.766Poecilia_latipinna
ENSELUG00000022654pabpn110089.916ENSPMEG00000020856pabpn110092.437Poecilia_mexicana
ENSELUG00000022654pabpn110090.336ENSPREG00000011278pabpn110092.857Poecilia_reticulata
ENSELUG00000022654pabpn18085.567ENSPPYG00000005663PABPN18673.967Pongo_abelii
ENSELUG00000022654pabpn17871.354ENSPCAG00000005902PABPN18261.885Procavia_capensis
ENSELUG00000022654pabpn19978.059ENSPCOG00000028047BCL2L2-PABPN18478.750Propithecus_coquereli
ENSELUG00000022654pabpn18683.732ENSPVAG00000005270PABPN18672.243Pteropus_vampyrus
ENSELUG00000022654pabpn110094.937ENSPNYG00000013182pabpn110094.937Pundamilia_nyererei
ENSELUG00000022654pabpn18763.462ENSPNAG00000021666pabpn1l9861.682Pygocentrus_nattereri
ENSELUG00000022654pabpn110095.781ENSPNAG00000023526pabpn110095.781Pygocentrus_nattereri
ENSELUG00000022654pabpn18584.951ENSRNOG00000042195Pabpn18573.462Rattus_norvegicus
ENSELUG00000022654pabpn18874.057ENSRBIG00000039547-8665.490Rhinopithecus_bieti
ENSELUG00000022654pabpn17487.640ENSRBIG00000040762BCL2L2-PABPN15290.419Rhinopithecus_bieti
ENSELUG00000022654pabpn18673.206ENSRBIG00000042811-9569.163Rhinopithecus_bieti
ENSELUG00000022654pabpn18669.668ENSRROG00000036409-8359.925Rhinopithecus_roxellana
ENSELUG00000022654pabpn17487.640ENSRROG00000045535BCL2L2-PABPN19485.714Rhinopithecus_roxellana
ENSELUG00000022654pabpn18674.879ENSRROG00000040409-8268.750Rhinopithecus_roxellana
ENSELUG00000022654pabpn17981.773ENSSBOG00000026930BCL2L2-PABPN18788.356Saimiri_boliviensis_boliviensis
ENSELUG00000022654pabpn17986.316ENSSHAG00000014841-8786.316Sarcophilus_harrisii
ENSELUG00000022654pabpn19962.810ENSSHAG00000007707-9959.504Sarcophilus_harrisii
ENSELUG00000022654pabpn16075.352ENSSFOG00015015833pabpn1l7770.238Scleropages_formosus
ENSELUG00000022654pabpn110086.920ENSSFOG00015012565pabpn110086.920Scleropages_formosus
ENSELUG00000022654pabpn110093.671ENSSFOG00015014718pabpn110093.671Scleropages_formosus
ENSELUG00000022654pabpn110095.359ENSSMAG00000020157pabpn110095.359Scophthalmus_maximus
ENSELUG00000022654pabpn19994.444ENSSDUG00000020582pabpn17894.444Seriola_dumerili
ENSELUG00000022654pabpn110094.937ENSSLDG00000007118pabpn110094.937Seriola_lalandi_dorsalis
ENSELUG00000022654pabpn17085.714ENSSPUG00000018308-9485.714Sphenodon_punctatus
ENSELUG00000022654pabpn110094.093ENSSPAG00000021658pabpn110094.093Stegastes_partitus
ENSELUG00000022654pabpn19164.055ENSSSCG00000034805-9052.852Sus_scrofa
ENSELUG00000022654pabpn18585.437ENSSSCG00000002023PABPN18673.485Sus_scrofa
ENSELUG00000022654pabpn110094.093ENSTRUG00000023664pabpn110094.093Takifugu_rubripes
ENSELUG00000022654pabpn19191.204ENSTNIG00000005369pabpn19095.385Tetraodon_nigroviridis
ENSELUG00000022654pabpn18585.437ENSUAMG00000024460PABPN18673.485Ursus_americanus
ENSELUG00000022654pabpn17987.368ENSUMAG00000014288BCL2L2-PABPN15787.368Ursus_maritimus
ENSELUG00000022654pabpn18186.082ENSVVUG00000019912BCL2L2-PABPN17686.082Vulpes_vulpes
ENSELUG00000022654pabpn18284.772ENSXETG00000014597pabpn17382.949Xenopus_tropicalis
ENSELUG00000022654pabpn17281.395ENSXCOG00000005158pabpn18994.079Xiphophorus_couchianus
ENSELUG00000022654pabpn110090.756ENSXMAG00000006196pabpn110093.277Xiphophorus_maculatus

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