EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000022739 (Gene tree)
Gene ID: 105024375
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 287-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 5585 bases
Position: chrLG05:32570675-32576259
Accession: 105024375
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000023931	zf-C2H2	PF00096.26	3e-13	1	2
ENSELUP00000023931	zf-C2H2	PF00096.26	3e-13	2	2
ENSELUP00000023936	zf-C2H2	PF00096.26	6.1e-13	1	2
ENSELUP00000023936	zf-C2H2	PF00096.26	6.1e-13	2	2
ENSELUP00000023931	zf-met	PF12874.7	6.2e-05	1	1
ENSELUP00000023936	zf-met	PF12874.7	0.00014	1	1
ENSELUP00000023931	zf-C2H2_jaz	PF12171.8	3.5e-06	1	1
ENSELUP00000023936	zf-C2H2_jaz	PF12171.8	6.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000042903	-	3248	-	ENSELUP00000023931	262 (aa)	-	UPI0005762611
ENSELUT00000042906	-	3437	XM_010894294	ENSELUP00000023936	325 (aa)	XP_010892596	UPI0005771D7D

Gene Model

Click here to download ENSELUG00000022739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000022739's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000022739	-	98	46.250	ENSELUG00000008131	-	100	46.250
ENSELUG00000022739	-	98	41.346	ENSELUG00000019880	-	99	41.346
ENSELUG00000022739	-	99	37.736	ENSELUG00000000281	-	57	41.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000022739	-	98	37.209	ENSKMAG00000021873	-	99	37.209	Kryptolebias_marmoratus