EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000022790 (Gene tree)
Gene ID: 105027095
Gene Symbol: -
Alias: -
Full Name: tRNA selenocysteine 1-associated protein 1-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 8984 bases
Position: chrLG20:20630442-20639425
Accession: 105027095
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000023943	RRM_1	PF00076.22	4.6e-10	1	1
ENSELUP00000041791	RRM_1	PF00076.22	2.1e-07	1	1
ENSELUP00000041774	RRM_1	PF00076.22	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000035249	-	606	XM_010899005	ENSELUP00000023943	201 (aa)	XP_010897307	UPI000576F95B
ENSELUT00000035229	-	870	XM_010899003	ENSELUP00000041774	189 (aa)	XP_010897305	UPI000577D81F
ENSELUT00000035260	-	594	-	ENSELUP00000041791	197 (aa)	-	-

Gene Model

Click here to download ENSELUG00000022790's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000022790's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000022790	-	96	84.536	ENSELUG00000017686	trnau1apa	95	84.536
ENSELUG00000022790	-	56	56.410	ENSELUG00000016683	trnau1apb	95	57.292

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000022790	-	94	52.055	ENSG00000180098	TRNAU1AP	96	70.526	Homo_sapiens
ENSELUG00000022790	-	95	80.682	ENSAPOG00000007148	TRNAU1AP	93	80.682	Acanthochromis_polyacanthus
ENSELUG00000022790	-	96	64.773	ENSAMEG00000011367	TRNAU1AP	96	70.526	Ailuropoda_melanoleuca
ENSELUG00000022790	-	95	81.818	ENSACIG00000004161	trnau1apa	93	81.818	Amphilophus_citrinellus
ENSELUG00000022790	-	95	80.682	ENSAOCG00000008056	trnau1apa	93	80.682	Amphiprion_ocellaris
ENSELUG00000022790	-	95	80.682	ENSAPEG00000008868	trnau1apa	93	80.682	Amphiprion_percula
ENSELUG00000022790	-	93	77.419	ENSATEG00000012140	trnau1apa	93	77.419	Anabas_testudineus
ENSELUG00000022790	-	92	70.238	ENSAPLG00000002606	TRNAU1AP	98	69.565	Anas_platyrhynchos
ENSELUG00000022790	-	78	36.364	ENSACAG00000004205	-	57	36.364	Anolis_carolinensis
ENSELUG00000022790	-	94	73.750	ENSACAG00000003995	-	89	72.727	Anolis_carolinensis
ENSELUG00000022790	-	94	53.814	ENSANAG00000018976	TRNAU1AP	96	70.526	Aotus_nancymaae
ENSELUG00000022790	-	95	81.818	ENSACLG00000018515	trnau1apa	93	81.818	Astatotilapia_calliptera
ENSELUG00000022790	-	96	60.504	ENSAMXG00000013750	trnau1apa	91	72.917	Astyanax_mexicanus
ENSELUG00000022790	-	96	67.347	ENSAMXG00000029240	-	98	62.376	Astyanax_mexicanus
ENSELUG00000022790	-	96	64.773	ENSBTAG00000010393	TRNAU1AP	96	70.526	Bos_taurus
ENSELUG00000022790	-	94	53.814	ENSCJAG00000009717	TRNAU1AP	96	70.526	Callithrix_jacchus
ENSELUG00000022790	-	94	52.055	ENSCAFG00000011735	TRNAU1AP	96	70.526	Canis_familiaris
ENSELUG00000022790	-	94	52.055	ENSCAFG00020023584	TRNAU1AP	96	70.526	Canis_lupus_dingo
ENSELUG00000022790	-	96	64.773	ENSCHIG00000023215	TRNAU1AP	96	70.526	Capra_hircus
ENSELUG00000022790	-	94	53.814	ENSTSYG00000003506	TRNAU1AP	96	70.526	Carlito_syrichta
ENSELUG00000022790	-	94	53.390	ENSCPOG00000001925	TRNAU1AP	96	70.526	Cavia_porcellus
ENSELUG00000022790	-	94	53.814	ENSCCAG00000037506	TRNAU1AP	96	70.526	Cebus_capucinus
ENSELUG00000022790	-	96	64.773	ENSCATG00000044617	TRNAU1AP	96	70.526	Cercocebus_atys
ENSELUG00000022790	-	94	53.390	ENSCLAG00000008223	TRNAU1AP	96	70.526	Chinchilla_lanigera
ENSELUG00000022790	-	96	64.773	ENSCSAG00000001014	TRNAU1AP	96	70.526	Chlorocebus_sabaeus
ENSELUG00000022790	-	94	50.370	ENSCPBG00000000121	TRNAU1AP	96	70.238	Chrysemys_picta_bellii
ENSELUG00000022790	-	96	39.044	ENSCANG00000041949	TRNAU1AP	95	43.158	Colobus_angolensis_palliatus
ENSELUG00000022790	-	94	53.390	ENSCGRG00001004713	Trnau1ap	96	70.526	Cricetulus_griseus_chok1gshd
ENSELUG00000022790	-	94	53.390	ENSCGRG00000014532	Trnau1ap	96	70.526	Cricetulus_griseus_crigri
ENSELUG00000022790	-	93	78.261	ENSCSEG00000006663	trnau1apa	92	78.261	Cynoglossus_semilaevis
ENSELUG00000022790	-	93	81.579	ENSCVAG00000018069	trnau1apa	91	81.579	Cyprinodon_variegatus
ENSELUG00000022790	-	94	52.055	ENSDNOG00000033009	TRNAU1AP	96	70.526	Dasypus_novemcinctus
ENSELUG00000022790	-	94	50.370	ENSDORG00000006349	Trnau1ap	97	70.526	Dipodomys_ordii
ENSELUG00000022790	-	95	64.583	ENSETEG00000012594	TRNAU1AP	95	73.585	Echinops_telfairi
ENSELUG00000022790	-	94	53.814	ENSEASG00005010062	TRNAU1AP	96	70.526	Equus_asinus_asinus
ENSELUG00000022790	-	94	53.814	ENSECAG00000012980	TRNAU1AP	96	70.526	Equus_caballus
ENSELUG00000022790	-	94	52.055	ENSFCAG00000013401	TRNAU1AP	96	70.526	Felis_catus
ENSELUG00000022790	-	94	70.238	ENSFALG00000001371	TRNAU1AP	96	70.238	Ficedula_albicollis
ENSELUG00000022790	-	94	53.814	ENSFDAG00000018599	TRNAU1AP	96	70.526	Fukomys_damarensis
ENSELUG00000022790	-	93	75.676	ENSGMOG00000016508	trnau1apa	85	75.676	Gadus_morhua
ENSELUG00000022790	-	77	35.465	ENSGALG00000012721	C2H6orf52	62	30.814	Gallus_gallus
ENSELUG00000022790	-	94	70.526	ENSGALG00000001310	-	96	70.526	Gallus_gallus
ENSELUG00000022790	-	95	79.545	ENSGACG00000001443	trnau1apa	93	79.545	Gasterosteus_aculeatus
ENSELUG00000022790	-	94	50.370	ENSGAGG00000004940	TRNAU1AP	96	70.238	Gopherus_agassizii
ENSELUG00000022790	-	94	53.814	ENSGGOG00000003511	TRNAU1AP	96	70.526	Gorilla_gorilla
ENSELUG00000022790	-	95	77.419	ENSHBUG00000002510	trnau1apa	94	77.419	Haplochromis_burtoni
ENSELUG00000022790	-	94	53.814	ENSHGLG00000010380	TRNAU1AP	96	70.526	Heterocephalus_glaber_female
ENSELUG00000022790	-	92	49.618	ENSHGLG00100012699	TRNAU1AP	96	63.158	Heterocephalus_glaber_male
ENSELUG00000022790	-	95	72.043	ENSHCOG00000014770	trnau1apa	93	72.043	Hippocampus_comes
ENSELUG00000022790	-	94	53.814	ENSSTOG00000000079	TRNAU1AP	96	70.526	Ictidomys_tridecemlineatus
ENSELUG00000022790	-	94	52.966	ENSJJAG00000010128	Trnau1ap	96	70.526	Jaculus_jaculus
ENSELUG00000022790	-	96	79.545	ENSKMAG00000001230	trnau1apa	93	79.545	Kryptolebias_marmoratus
ENSELUG00000022790	-	93	75.269	ENSLBEG00000011683	trnau1apa	93	75.269	Labrus_bergylta
ENSELUG00000022790	-	95	51.042	ENSLACG00000005541	TRNAU1AP	96	51.042	Latimeria_chalumnae
ENSELUG00000022790	-	95	75.000	ENSLOCG00000004041	trnau1apa	97	75.000	Lepisosteus_oculatus
ENSELUG00000022790	-	94	52.740	ENSLAFG00000007628	TRNAU1AP	96	71.579	Loxodonta_africana
ENSELUG00000022790	-	96	64.773	ENSMFAG00000043751	TRNAU1AP	96	70.526	Macaca_fascicularis
ENSELUG00000022790	-	96	64.773	ENSMMUG00000006561	TRNAU1AP	96	70.526	Macaca_mulatta
ENSELUG00000022790	-	96	64.773	ENSMNEG00000044201	TRNAU1AP	96	70.526	Macaca_nemestrina
ENSELUG00000022790	-	96	64.773	ENSMLEG00000015649	TRNAU1AP	96	70.526	Mandrillus_leucophaeus
ENSELUG00000022790	-	95	80.682	ENSMAMG00000001247	trnau1apa	93	80.682	Mastacembelus_armatus
ENSELUG00000022790	-	95	81.818	ENSMZEG00005017722	trnau1apa	93	81.818	Maylandia_zebra
ENSELUG00000022790	-	93	71.591	ENSMGAG00000002105	TRNAU1AP	96	71.591	Meleagris_gallopavo
ENSELUG00000022790	-	94	53.814	ENSMICG00000008386	TRNAU1AP	96	70.526	Microcebus_murinus
ENSELUG00000022790	-	94	53.390	ENSMOCG00000011189	Trnau1ap	96	70.526	Microtus_ochrogaster
ENSELUG00000022790	-	95	73.494	ENSMMOG00000012107	trnau1apa	93	73.494	Mola_mola
ENSELUG00000022790	-	94	70.526	ENSMODG00000010927	TRNAU1AP	96	70.526	Monodelphis_domestica
ENSELUG00000022790	-	95	81.081	ENSMALG00000016778	trnau1apa	93	80.682	Monopterus_albus
ENSELUG00000022790	-	96	64.773	MGP_CAROLIEiJ_G0026563	Trnau1ap	96	70.526	Mus_caroli
ENSELUG00000022790	-	96	64.773	ENSMUSG00000028898	Trnau1ap	96	70.526	Mus_musculus
ENSELUG00000022790	-	96	64.773	MGP_PahariEiJ_G0028896	Trnau1ap	96	70.526	Mus_pahari
ENSELUG00000022790	-	96	64.773	MGP_SPRETEiJ_G0027544	Trnau1ap	96	70.526	Mus_spretus
ENSELUG00000022790	-	94	52.055	ENSMPUG00000015511	TRNAU1AP	96	70.526	Mustela_putorius_furo
ENSELUG00000022790	-	94	52.055	ENSMLUG00000012586	TRNAU1AP	96	70.526	Myotis_lucifugus
ENSELUG00000022790	-	94	52.119	ENSNGAG00000015881	Trnau1ap	96	70.526	Nannospalax_galili
ENSELUG00000022790	-	96	79.167	ENSNBRG00000001758	trnau1apa	91	79.167	Neolamprologus_brichardi
ENSELUG00000022790	-	94	52.055	ENSNLEG00000009822	TRNAU1AP	96	70.526	Nomascus_leucogenys
ENSELUG00000022790	-	93	71.591	ENSMEUG00000006117	TRNAU1AP	96	71.591	Notamacropus_eugenii
ENSELUG00000022790	-	79	71.264	ENSOPRG00000007084	-	54	71.264	Ochotona_princeps
ENSELUG00000022790	-	94	53.390	ENSODEG00000002970	TRNAU1AP	96	70.526	Octodon_degus
ENSELUG00000022790	-	77	81.250	ENSONIG00000004715	trnau1apa	96	80.247	Oreochromis_niloticus
ENSELUG00000022790	-	92	70.833	ENSOANG00000005325	-	82	66.667	Ornithorhynchus_anatinus
ENSELUG00000022790	-	94	45.205	ENSOCUG00000002353	-	96	60.000	Oryctolagus_cuniculus
ENSELUG00000022790	-	78	57.576	ENSOCUG00000006834	-	97	52.632	Oryctolagus_cuniculus
ENSELUG00000022790	-	96	64.773	ENSOCUG00000011704	-	96	69.474	Oryctolagus_cuniculus
ENSELUG00000022790	-	93	79.545	ENSORLG00000010428	trnau1apa	92	79.545	Oryzias_latipes
ENSELUG00000022790	-	93	79.545	ENSORLG00020000926	trnau1ap	91	79.545	Oryzias_latipes_hni
ENSELUG00000022790	-	93	79.545	ENSORLG00015009858	trnau1ap	91	79.545	Oryzias_latipes_hsok
ENSELUG00000022790	-	93	79.545	ENSOMEG00000007873	trnau1apa	91	79.545	Oryzias_melastigma
ENSELUG00000022790	-	94	52.055	ENSOGAG00000002274	TRNAU1AP	96	70.526	Otolemur_garnettii
ENSELUG00000022790	-	96	64.773	ENSOARG00000002843	TRNAU1AP	96	70.526	Ovis_aries
ENSELUG00000022790	-	94	52.055	ENSPPAG00000033927	TRNAU1AP	96	70.526	Pan_paniscus
ENSELUG00000022790	-	94	52.055	ENSPPRG00000004416	TRNAU1AP	96	70.526	Panthera_pardus
ENSELUG00000022790	-	94	52.055	ENSPTIG00000016677	TRNAU1AP	96	70.526	Panthera_tigris_altaica
ENSELUG00000022790	-	93	44.961	ENSPTRG00000000434	-	93	62.821	Pan_troglodytes
ENSELUG00000022790	-	96	64.773	ENSPANG00000016019	TRNAU1AP	96	70.526	Papio_anubis
ENSELUG00000022790	-	93	78.125	ENSPKIG00000015511	trnau1apa	92	78.125	Paramormyrops_kingsleyae
ENSELUG00000022790	-	96	82.812	ENSPKIG00000022205	-	97	82.812	Paramormyrops_kingsleyae
ENSELUG00000022790	-	94	50.370	ENSPSIG00000006864	TRNAU1AP	96	70.238	Pelodiscus_sinensis
ENSELUG00000022790	-	93	81.250	ENSPMGG00000023893	trnau1apa	87	81.250	Periophthalmus_magnuspinnatus
ENSELUG00000022790	-	94	52.966	ENSPEMG00000007877	Trnau1ap	96	69.474	Peromyscus_maniculatus_bairdii
ENSELUG00000022790	-	96	80.682	ENSPFOG00000008100	trnau1apa	93	80.682	Poecilia_formosa
ENSELUG00000022790	-	96	80.263	ENSPLAG00000010236	trnau1apa	92	80.263	Poecilia_latipinna
ENSELUG00000022790	-	96	80.000	ENSPMEG00000016387	trnau1apa	89	80.000	Poecilia_mexicana
ENSELUG00000022790	-	95	58.889	ENSPREG00000019821	trnau1apa	86	80.000	Poecilia_reticulata
ENSELUG00000022790	-	93	67.692	ENSPPYG00000001639	-	96	66.667	Pongo_abelii
ENSELUG00000022790	-	94	52.889	ENSPCOG00000027712	-	96	70.526	Propithecus_coquereli
ENSELUG00000022790	-	94	48.214	ENSPCOG00000023470	-	96	50.644	Propithecus_coquereli
ENSELUG00000022790	-	94	52.055	ENSPVAG00000017214	TRNAU1AP	96	70.526	Pteropus_vampyrus
ENSELUG00000022790	-	95	77.419	ENSPNYG00000010130	trnau1apa	98	77.419	Pundamilia_nyererei
ENSELUG00000022790	-	96	73.626	ENSPNAG00000024905	trnau1apa	51	73.626	Pygocentrus_nattereri
ENSELUG00000022790	-	83	52.778	ENSRNOG00000055344	Trnau1ap	87	72.043	Rattus_norvegicus
ENSELUG00000022790	-	94	53.814	ENSRBIG00000029083	TRNAU1AP	96	70.526	Rhinopithecus_bieti
ENSELUG00000022790	-	94	53.814	ENSRROG00000029128	TRNAU1AP	96	70.526	Rhinopithecus_roxellana
ENSELUG00000022790	-	94	53.814	ENSSBOG00000021299	TRNAU1AP	96	70.526	Saimiri_boliviensis_boliviensis
ENSELUG00000022790	-	94	70.526	ENSSHAG00000008108	TRNAU1AP	96	70.526	Sarcophilus_harrisii
ENSELUG00000022790	-	93	76.136	ENSSMAG00000020851	trnau1apa	92	76.136	Scophthalmus_maximus
ENSELUG00000022790	-	95	81.818	ENSSDUG00000011734	trnau1apa	93	81.818	Seriola_dumerili
ENSELUG00000022790	-	95	52.991	ENSSLDG00000012101	trnau1apa	92	49.356	Seriola_lalandi_dorsalis
ENSELUG00000022790	-	93	51.799	ENSSARG00000007536	TRNAU1AP	96	71.591	Sorex_araneus
ENSELUG00000022790	-	78	44.516	ENSSPUG00000010415	-	85	44.156	Sphenodon_punctatus
ENSELUG00000022790	-	94	68.421	ENSSPUG00000010400	-	96	68.421	Sphenodon_punctatus
ENSELUG00000022790	-	95	80.682	ENSSPAG00000005029	trnau1apa	93	80.682	Stegastes_partitus
ENSELUG00000022790	-	94	53.017	ENSSSCG00000030284	TRNAU1AP	96	70.526	Sus_scrofa
ENSELUG00000022790	-	93	71.591	ENSTGUG00000000735	-	96	71.591	Taeniopygia_guttata
ENSELUG00000022790	-	93	33.854	ENSTGUG00000005908	-	93	30.303	Taeniopygia_guttata
ENSELUG00000022790	-	95	80.682	ENSTRUG00000003352	trnau1apa	93	80.682	Takifugu_rubripes
ENSELUG00000022790	-	95	78.409	ENSTNIG00000006129	trnau1apa	93	78.409	Tetraodon_nigroviridis
ENSELUG00000022790	-	93	83.871	ENSTBEG00000008049	-	86	83.871	Tupaia_belangeri
ENSELUG00000022790	-	94	52.055	ENSTTRG00000001854	TRNAU1AP	96	70.526	Tursiops_truncatus
ENSELUG00000022790	-	95	64.557	ENSUAMG00000008789	TRNAU1AP	96	70.238	Ursus_americanus
ENSELUG00000022790	-	96	64.773	ENSUMAG00000011068	TRNAU1AP	96	70.526	Ursus_maritimus
ENSELUG00000022790	-	95	64.583	ENSVPAG00000006778	TRNAU1AP	77	73.585	Vicugna_pacos
ENSELUG00000022790	-	94	50.370	ENSVVUG00000012518	TRNAU1AP	89	68.085	Vulpes_vulpes
ENSELUG00000022790	-	96	80.682	ENSXMAG00000017361	trnau1apa	93	80.682	Xiphophorus_maculatus