EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000022906 (Gene tree)
Gene ID: 105012123
Gene Symbol: RBM20
Alias: -
Full Name: RNA binding motif protein 20
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 54540 bases
Position: chrLG09:12428547-12483086
Accession: 105012123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000024111	zf-met	PF12874.7	0.00049	1	1
ENSELUP00000024103	zf-met	PF12874.7	0.00059	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000042984	RBM20-202	4907	XM_020049893	ENSELUP00000024103	1199 (aa)	XP_019905452	UPI0009734B5A
ENSELUT00000035470	RBM20-201	5390	XM_010872759	ENSELUP00000024111	1215 (aa)	XP_010871061	UPI0005764DEC

Gene Model

Click here to download ENSELUG00000022906's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000022906's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000022906	RBM20	87	54.861	ENSAPOG00000011327	RBM20	99	53.514	Acanthochromis_polyacanthus
ENSELUG00000022906	RBM20	84	83.333	ENSACIG00000016368	RBM20	90	83.333	Amphilophus_citrinellus
ENSELUG00000022906	RBM20	100	56.275	ENSAOCG00000018378	RBM20	100	55.423	Amphiprion_ocellaris
ENSELUG00000022906	RBM20	84	59.804	ENSATEG00000008782	RBM20	98	92.982	Anabas_testudineus
ENSELUG00000022906	RBM20	100	52.824	ENSACLG00000025652	RBM20	100	51.911	Astatotilapia_calliptera
ENSELUG00000022906	RBM20	100	52.988	ENSHBUG00000016743	RBM20	100	52.108	Haplochromis_burtoni
ENSELUG00000022906	RBM20	95	51.335	ENSKMAG00000020318	RBM20	95	50.561	Kryptolebias_marmoratus
ENSELUG00000022906	RBM20	96	36.386	ENSLACG00000012822	RBM20	59	67.105	Latimeria_chalumnae
ENSELUG00000022906	RBM20	94	56.234	ENSMAMG00000014492	RBM20	99	54.590	Mastacembelus_armatus
ENSELUG00000022906	RBM20	100	52.983	ENSMZEG00005003037	RBM20	100	52.070	Maylandia_zebra
ENSELUG00000022906	RBM20	86	59.615	ENSMMOG00000021599	RBM20	96	59.615	Mola_mola
ENSELUG00000022906	RBM20	75	39.153	ENSMODG00000010399	RBM20	68	41.221	Monodelphis_domestica
ENSELUG00000022906	RBM20	100	52.707	ENSNBRG00000003302	RBM20	100	52.385	Neolamprologus_brichardi
ENSELUG00000022906	RBM20	94	51.669	ENSONIG00000016294	RBM20	99	54.235	Oreochromis_niloticus
ENSELUG00000022906	RBM20	99	49.559	ENSPKIG00000017337	RBM20	99	48.792	Paramormyrops_kingsleyae
ENSELUG00000022906	RBM20	100	53.021	ENSPNYG00000002118	RBM20	100	52.032	Pundamilia_nyererei
ENSELUG00000022906	RBM20	100	55.112	ENSSMAG00000001397	RBM20	100	54.422	Scophthalmus_maximus
ENSELUG00000022906	RBM20	97	57.024	ENSSDUG00000010084	RBM20	96	56.250	Seriola_dumerili
ENSELUG00000022906	RBM20	100	56.035	ENSSLDG00000012344	RBM20	100	55.396	Seriola_lalandi_dorsalis
ENSELUG00000022906	RBM20	100	55.732	ENSSPAG00000005114	RBM20	100	54.690	Stegastes_partitus