EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000023026 (Gene tree)
Gene ID: 105011459
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 12761 bases
Position: chrLG08:10190487-10203247
Accession: 105011459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000041909	Surp	PF01805.20	1.9e-16	1	1
ENSELUP00000041940	Surp	PF01805.20	3.6e-16	1	1
ENSELUP00000041936	Surp	PF01805.20	3.9e-16	1	1
ENSELUP00000041898	G-patch	PF01585.23	8.9e-11	1	1
ENSELUP00000024118	G-patch	PF01585.23	9.1e-11	1	1
ENSELUP00000041909	G-patch	PF01585.23	9.3e-11	1	1
ENSELUP00000041936	G-patch	PF01585.23	1e-10	1	1
ENSELUP00000041940	G-patch	PF01585.23	1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000035551	-	3218	XM_010871483	ENSELUP00000041940	966 (aa)	XP_010869785	-
ENSELUT00000035480	-	3335	-	ENSELUP00000024118	886 (aa)	-	-
ENSELUT00000035463	-	3278	-	ENSELUP00000041898	867 (aa)	-	-
ENSELUT00000035487	-	2700	-	ENSELUP00000041909	899 (aa)	-	-
ENSELUT00000043009	-	3179	XM_020048701	ENSELUP00000041936	953 (aa)	XP_019904260	-

Gene Model

Click here to download ENSELUG00000023026's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000023026's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000023026	cherp	80	68.309	ENSG00000085872	CHERP	80	68.316	Homo_sapiens
ENSELUG00000023026	cherp	59	72.464	ENSAPOG00000009646	cherp	98	71.629	Acanthochromis_polyacanthus
ENSELUG00000023026	cherp	98	66.234	ENSAMEG00000010048	CHERP	80	68.649	Ailuropoda_melanoleuca
ENSELUG00000023026	cherp	98	73.673	ENSACIG00000019242	cherp	80	77.687	Amphilophus_citrinellus
ENSELUG00000023026	cherp	98	75.969	ENSAOCG00000017846	cherp	99	74.834	Amphiprion_ocellaris
ENSELUG00000023026	cherp	99	73.868	ENSAPEG00000021128	cherp	99	74.945	Amphiprion_percula
ENSELUG00000023026	cherp	98	75.858	ENSATEG00000006341	cherp	98	75.685	Anabas_testudineus
ENSELUG00000023026	cherp	77	67.222	ENSAPLG00000010773	CHERP	78	66.667	Anas_platyrhynchos
ENSELUG00000023026	cherp	98	61.925	ENSANAG00000024284	CHERP	83	64.798	Aotus_nancymaae
ENSELUG00000023026	cherp	98	75.470	ENSACLG00000020053	cherp	99	75.248	Astatotilapia_calliptera
ENSELUG00000023026	cherp	79	76.685	ENSAMXG00000021637	cherp	93	74.197	Astyanax_mexicanus
ENSELUG00000023026	cherp	98	65.581	ENSBTAG00000005289	CHERP	99	68.438	Bos_taurus
ENSELUG00000023026	cherp	81	90.000	ENSCJAG00000040462	CHERP	82	66.216	Callithrix_jacchus
ENSELUG00000023026	cherp	79	68.625	ENSCAFG00000015671	CHERP	80	68.435	Canis_familiaris
ENSELUG00000023026	cherp	82	83.516	ENSCAFG00020009941	CHERP	91	81.188	Canis_lupus_dingo
ENSELUG00000023026	cherp	83	82.796	ENSCHIG00000013765	CHERP	95	82.796	Capra_hircus
ENSELUG00000023026	cherp	94	62.061	ENSCAPG00000000910	CHERP	85	66.220	Cavia_aperea
ENSELUG00000023026	cherp	79	67.593	ENSCPOG00000019949	CHERP	99	67.403	Cavia_porcellus
ENSELUG00000023026	cherp	80	67.323	ENSCCAG00000031534	CHERP	80	67.325	Cebus_capucinus
ENSELUG00000023026	cherp	80	67.104	ENSCATG00000031409	CHERP	80	67.105	Cercocebus_atys
ENSELUG00000023026	cherp	71	68.892	ENSCLAG00000005484	CHERP	73	69.033	Chinchilla_lanigera
ENSELUG00000023026	cherp	80	68.309	ENSCSAG00000005740	CHERP	80	68.302	Chlorocebus_sabaeus
ENSELUG00000023026	cherp	94	67.849	ENSCPBG00000014970	CHERP	80	66.979	Chrysemys_picta_bellii
ENSELUG00000023026	cherp	76	47.965	ENSCING00000004814	-	60	58.389	Ciona_intestinalis
ENSELUG00000023026	cherp	80	68.309	ENSCANG00000032053	CHERP	80	68.302	Colobus_angolensis_palliatus
ENSELUG00000023026	cherp	80	66.884	ENSCGRG00001023316	Cherp	99	67.259	Cricetulus_griseus_chok1gshd
ENSELUG00000023026	cherp	79	68.133	ENSCGRG00000015901	Cherp	99	68.051	Cricetulus_griseus_crigri
ENSELUG00000023026	cherp	80	76.027	ENSCSEG00000019700	cherp	99	73.384	Cynoglossus_semilaevis
ENSELUG00000023026	cherp	76	76.156	ENSCVAG00000003622	cherp	99	71.526	Cyprinodon_variegatus
ENSELUG00000023026	cherp	98	72.667	ENSDARG00000021812	cherp	100	81.961	Danio_rerio
ENSELUG00000023026	cherp	97	65.083	ENSDORG00000027623	Cherp	80	69.220	Dipodomys_ordii
ENSELUG00000023026	cherp	61	60.938	FBgn0261872	scaf6	54	60.938	Drosophila_melanogaster
ENSELUG00000023026	cherp	79	68.491	ENSEASG00005000428	CHERP	73	68.302	Equus_asinus_asinus
ENSELUG00000023026	cherp	79	67.952	ENSECAG00000012713	CHERP	80	68.170	Equus_caballus
ENSELUG00000023026	cherp	79	67.323	ENSFCAG00000013172	CHERP	80	67.275	Felis_catus
ENSELUG00000023026	cherp	80	68.059	ENSFALG00000013410	CHERP	69	66.711	Ficedula_albicollis
ENSELUG00000023026	cherp	79	62.433	ENSFDAG00000015981	CHERP	81	61.955	Fukomys_damarensis
ENSELUG00000023026	cherp	84	86.957	ENSFHEG00000009720	cherp	79	68.927	Fundulus_heteroclitus
ENSELUG00000023026	cherp	79	77.639	ENSGMOG00000008654	cherp	99	75.604	Gadus_morhua
ENSELUG00000023026	cherp	80	67.785	ENSGALG00000003824	CHERP	70	67.517	Gallus_gallus
ENSELUG00000023026	cherp	79	73.297	ENSGACG00000002053	cherp	98	71.630	Gasterosteus_aculeatus
ENSELUG00000023026	cherp	91	67.857	ENSGAGG00000014208	CHERP	80	66.979	Gopherus_agassizii
ENSELUG00000023026	cherp	62	82.292	ENSGGOG00000016348	CHERP	72	57.035	Gorilla_gorilla
ENSELUG00000023026	cherp	98	75.580	ENSHBUG00000007405	cherp	99	75.248	Haplochromis_burtoni
ENSELUG00000023026	cherp	80	69.159	ENSHGLG00000002993	CHERP	79	69.128	Heterocephalus_glaber_female
ENSELUG00000023026	cherp	50	74.848	ENSHGLG00100010390	CHERP	66	66.418	Heterocephalus_glaber_male
ENSELUG00000023026	cherp	80	73.187	ENSHCOG00000007691	cherp	99	69.710	Hippocampus_comes
ENSELUG00000023026	cherp	80	79.917	ENSIPUG00000025008	cherp	99	75.987	Ictalurus_punctatus
ENSELUG00000023026	cherp	79	69.012	ENSSTOG00000012089	CHERP	80	68.641	Ictidomys_tridecemlineatus
ENSELUG00000023026	cherp	80	76.657	ENSKMAG00000009101	cherp	99	74.421	Kryptolebias_marmoratus
ENSELUG00000023026	cherp	79	77.139	ENSLBEG00000007586	cherp	91	76.323	Labrus_bergylta
ENSELUG00000023026	cherp	80	66.968	ENSLACG00000018221	CHERP	80	65.548	Latimeria_chalumnae
ENSELUG00000023026	cherp	98	74.242	ENSLOCG00000003654	cherp	79	79.245	Lepisosteus_oculatus
ENSELUG00000023026	cherp	79	69.783	ENSLAFG00000009096	CHERP	100	65.926	Loxodonta_africana
ENSELUG00000023026	cherp	80	67.192	ENSMFAG00000033267	CHERP	80	67.325	Macaca_fascicularis
ENSELUG00000023026	cherp	98	64.592	ENSMMUG00000012958	CHERP	82	67.712	Macaca_mulatta
ENSELUG00000023026	cherp	80	67.192	ENSMNEG00000004125	CHERP	80	67.325	Macaca_nemestrina
ENSELUG00000023026	cherp	72	77.222	ENSMLEG00000044337	CHERP	77	77.348	Mandrillus_leucophaeus
ENSELUG00000023026	cherp	80	78.333	ENSMAMG00000022269	cherp	99	76.362	Mastacembelus_armatus
ENSELUG00000023026	cherp	98	75.470	ENSMZEG00005018014	cherp	99	75.248	Maylandia_zebra
ENSELUG00000023026	cherp	72	69.953	ENSMGAG00000005571	CHERP	71	69.097	Meleagris_gallopavo
ENSELUG00000023026	cherp	98	65.422	ENSMAUG00000015856	Cherp	99	67.435	Mesocricetus_auratus
ENSELUG00000023026	cherp	79	69.220	ENSMICG00000004577	CHERP	80	69.292	Microcebus_murinus
ENSELUG00000023026	cherp	80	68.393	ENSMOCG00000014697	Cherp	99	68.259	Microtus_ochrogaster
ENSELUG00000023026	cherp	97	76.932	ENSMMOG00000008525	cherp	80	77.731	Mola_mola
ENSELUG00000023026	cherp	75	66.284	ENSMODG00000014938	CHERP	81	66.065	Monodelphis_domestica
ENSELUG00000023026	cherp	80	77.317	ENSMALG00000020688	cherp	99	75.784	Monopterus_albus
ENSELUG00000023026	cherp	80	67.500	MGP_CAROLIEiJ_G0031220	Cherp	99	67.545	Mus_caroli
ENSELUG00000023026	cherp	75	68.152	ENSMUSG00000052488	Cherp	79	67.235	Mus_musculus
ENSELUG00000023026	cherp	80	68.127	MGP_PahariEiJ_G0021685	Cherp	99	68.259	Mus_pahari
ENSELUG00000023026	cherp	80	67.810	MGP_SPRETEiJ_G0032341	Cherp	99	67.687	Mus_spretus
ENSELUG00000023026	cherp	79	68.667	ENSMPUG00000016023	CHERP	97	67.725	Mustela_putorius_furo
ENSELUG00000023026	cherp	80	64.191	ENSMLUG00000013881	CHERP	80	63.276	Myotis_lucifugus
ENSELUG00000023026	cherp	80	67.318	ENSNGAG00000023323	Cherp	99	66.493	Nannospalax_galili
ENSELUG00000023026	cherp	98	73.274	ENSNBRG00000001914	cherp	81	75.549	Neolamprologus_brichardi
ENSELUG00000023026	cherp	80	68.309	ENSNLEG00000005536	CHERP	80	68.302	Nomascus_leucogenys
ENSELUG00000023026	cherp	65	79.181	ENSMEUG00000010840	CHERP	75	88.889	Notamacropus_eugenii
ENSELUG00000023026	cherp	97	67.035	ENSODEG00000001528	CHERP	99	66.704	Octodon_degus
ENSELUG00000023026	cherp	98	74.619	ENSONIG00000007686	cherp	99	74.837	Oreochromis_niloticus
ENSELUG00000023026	cherp	99	70.983	ENSORLG00000000138	cherp	99	71.934	Oryzias_latipes
ENSELUG00000023026	cherp	99	70.867	ENSORLG00020013142	cherp	99	72.044	Oryzias_latipes_hni
ENSELUG00000023026	cherp	99	70.983	ENSORLG00015008911	cherp	99	71.713	Oryzias_latipes_hsok
ENSELUG00000023026	cherp	99	71.214	ENSOMEG00000016947	cherp	99	72.155	Oryzias_melastigma
ENSELUG00000023026	cherp	80	67.244	ENSOGAG00000005834	CHERP	79	66.976	Otolemur_garnettii
ENSELUG00000023026	cherp	98	61.505	ENSOARG00000018876	CHERP	98	59.916	Ovis_aries
ENSELUG00000023026	cherp	80	67.104	ENSPPAG00000029195	CHERP	80	66.974	Pan_paniscus
ENSELUG00000023026	cherp	79	67.323	ENSPPRG00000003275	CHERP	80	67.275	Panthera_pardus
ENSELUG00000023026	cherp	97	53.093	ENSPTIG00000019778	CHERP	97	81.000	Panthera_tigris_altaica
ENSELUG00000023026	cherp	98	64.363	ENSPTRG00000010647	CHERP	80	68.091	Pan_troglodytes
ENSELUG00000023026	cherp	80	67.192	ENSPANG00000011698	CHERP	80	67.325	Papio_anubis
ENSELUG00000023026	cherp	98	67.370	ENSPKIG00000000423	cherp	98	70.000	Paramormyrops_kingsleyae
ENSELUG00000023026	cherp	79	66.579	ENSPSIG00000011974	CHERP	79	67.564	Pelodiscus_sinensis
ENSELUG00000023026	cherp	89	86.316	ENSPMGG00000023606	cherp	89	83.673	Periophthalmus_magnuspinnatus
ENSELUG00000023026	cherp	80	66.796	ENSPEMG00000011238	Cherp	99	67.083	Peromyscus_maniculatus_bairdii
ENSELUG00000023026	cherp	79	67.188	ENSPCIG00000019615	CHERP	77	66.840	Phascolarctos_cinereus
ENSELUG00000023026	cherp	98	72.747	ENSPFOG00000016899	cherp	99	72.917	Poecilia_formosa
ENSELUG00000023026	cherp	90	72.704	ENSPMEG00000002214	cherp	76	76.280	Poecilia_mexicana
ENSELUG00000023026	cherp	98	72.717	ENSPREG00000020774	cherp	99	73.355	Poecilia_reticulata
ENSELUG00000023026	cherp	80	67.627	ENSPPYG00000009691	CHERP	79	67.263	Pongo_abelii
ENSELUG00000023026	cherp	90	78.571	ENSPCAG00000001337	CHERP	90	80.645	Procavia_capensis
ENSELUG00000023026	cherp	90	79.592	ENSPVAG00000004320	CHERP	90	81.720	Pteropus_vampyrus
ENSELUG00000023026	cherp	98	75.359	ENSPNYG00000003942	cherp	99	75.248	Pundamilia_nyererei
ENSELUG00000023026	cherp	99	72.788	ENSPNAG00000017179	cherp	99	74.359	Pygocentrus_nattereri
ENSELUG00000023026	cherp	80	67.500	ENSRNOG00000012323	Cherp	99	67.439	Rattus_norvegicus
ENSELUG00000023026	cherp	98	63.841	ENSRBIG00000038621	CHERP	83	67.325	Rhinopithecus_bieti
ENSELUG00000023026	cherp	98	63.841	ENSRROG00000040770	CHERP	83	67.325	Rhinopithecus_roxellana
ENSELUG00000023026	cherp	84	76.852	ENSSBOG00000014492	CHERP	85	63.964	Saimiri_boliviensis_boliviensis
ENSELUG00000023026	cherp	74	67.102	ENSSHAG00000010752	CHERP	80	65.452	Sarcophilus_harrisii
ENSELUG00000023026	cherp	67	85.714	ENSSFOG00015008022	cherp	84	81.056	Scleropages_formosus
ENSELUG00000023026	cherp	98	73.218	ENSSMAG00000005362	cherp	99	74.516	Scophthalmus_maximus
ENSELUG00000023026	cherp	99	74.610	ENSSDUG00000019712	cherp	99	75.539	Seriola_dumerili
ENSELUG00000023026	cherp	98	76.201	ENSSLDG00000012659	cherp	99	76.196	Seriola_lalandi_dorsalis
ENSELUG00000023026	cherp	79	69.168	ENSSPUG00000008901	CHERP	79	69.547	Sphenodon_punctatus
ENSELUG00000023026	cherp	98	75.774	ENSSPAG00000010681	cherp	99	75.385	Stegastes_partitus
ENSELUG00000023026	cherp	79	68.358	ENSSSCG00000013860	CHERP	80	68.170	Sus_scrofa
ENSELUG00000023026	cherp	80	67.557	ENSTGUG00000000680	CHERP	80	66.140	Taeniopygia_guttata
ENSELUG00000023026	cherp	80	72.592	ENSTRUG00000007429	cherp	99	71.027	Takifugu_rubripes
ENSELUG00000023026	cherp	98	71.413	ENSTNIG00000003363	cherp	80	74.619	Tetraodon_nigroviridis
ENSELUG00000023026	cherp	69	67.188	ENSTTRG00000015006	CHERP	70	66.406	Tursiops_truncatus
ENSELUG00000023026	cherp	98	63.804	ENSUAMG00000017295	CHERP	80	66.803	Ursus_americanus
ENSELUG00000023026	cherp	95	62.971	ENSVVUG00000016546	CHERP	80	67.100	Vulpes_vulpes
ENSELUG00000023026	cherp	98	61.890	ENSXETG00000002072	cherp	98	64.681	Xenopus_tropicalis