EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000023043 (Gene tree)
Gene ID: 105027787
Gene Symbol: elavl3
Alias: elav-related C|elavC|elrc|etID309927.3|huc|id:ibd1248|wu:fb77b03|zHuC
Full Name: ELAV like RNA binding protein 3
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 13000 bases
Position: chrLG11:8444403-8457402
Accession: 105027787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000024205	RRM_5	PF13893.6	2.5e-12	1	2
ENSELUP00000024205	RRM_5	PF13893.6	2.5e-12	2	2
ENSELUP00000041969	RRM_5	PF13893.6	2.4e-10	1	1
ENSELUP00000041967	RRM_5	PF13893.6	3.2e-10	1	1
ENSELUP00000024230	RRM_5	PF13893.6	3.8e-10	1	1
ENSELUP00000024205	RRM_1	PF00076.22	2e-64	1	3
ENSELUP00000024205	RRM_1	PF00076.22	2e-64	2	3
ENSELUP00000024205	RRM_1	PF00076.22	2e-64	3	3
ENSELUP00000041969	RRM_1	PF00076.22	1.7e-59	1	3
ENSELUP00000041969	RRM_1	PF00076.22	1.7e-59	2	3
ENSELUP00000041969	RRM_1	PF00076.22	1.7e-59	3	3
ENSELUP00000041967	RRM_1	PF00076.22	2.2e-59	1	3
ENSELUP00000041967	RRM_1	PF00076.22	2.2e-59	2	3
ENSELUP00000041967	RRM_1	PF00076.22	2.2e-59	3	3
ENSELUP00000024230	RRM_1	PF00076.22	2.6e-59	1	3
ENSELUP00000024230	RRM_1	PF00076.22	2.6e-59	2	3
ENSELUP00000024230	RRM_1	PF00076.22	2.6e-59	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000043025	-	1062	-	ENSELUP00000024205	353 (aa)	-	-
ENSELUT00000035616	-	1706	XM_020051128	ENSELUP00000041967	378 (aa)	XP_019906687	-
ENSELUT00000043034	-	1652	XM_010900059	ENSELUP00000041969	360 (aa)	XP_010898361	UPI0005768F61
ENSELUT00000043036	-	1745	XM_010900051	ENSELUP00000024230	391 (aa)	XP_010898353	UPI00057740FC

Gene Model

Click here to download ENSELUG00000023043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000023043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000023043	elavl3	89	71.019	ENSELUG00000003289	-	91	71.019
ENSELUG00000023043	elavl3	62	35.616	ENSELUG00000004652	-	59	35.616
ENSELUG00000023043	elavl3	84	41.860	ENSELUG00000008279	-	61	41.860
ENSELUG00000023043	elavl3	82	40.698	ENSELUG00000007383	celf5b	63	40.698
ENSELUG00000023043	elavl3	94	35.156	ENSELUG00000005848	-	73	35.156
ENSELUG00000023043	elavl3	91	33.708	ENSELUG00000018986	celf5a	95	33.708
ENSELUG00000023043	elavl3	89	37.179	ENSELUG00000020994	tial1	70	37.179
ENSELUG00000023043	elavl3	92	37.349	ENSELUG00000003614	pabpc1a	59	37.349
ENSELUG00000023043	elavl3	90	38.462	ENSELUG00000005615	-	93	38.462
ENSELUG00000023043	elavl3	90	70.032	ENSELUG00000008024	elavl1a	91	70.032
ENSELUG00000023043	elavl3	98	83.616	ENSELUG00000008025	elavl4	91	83.616
ENSELUG00000023043	elavl3	88	41.860	ENSELUG00000006121	celf3a	71	41.860
ENSELUG00000023043	elavl3	69	35.638	ENSELUG00000006905	-	82	35.052
ENSELUG00000023043	elavl3	66	36.667	ENSELUG00000018923	rbms1a	54	36.667
ENSELUG00000023043	elavl3	76	43.678	ENSELUG00000023173	celf1	68	35.821
ENSELUG00000023043	elavl3	92	36.145	ENSELUG00000001811	pabpc1l	67	36.145
ENSELUG00000023043	elavl3	74	41.860	ENSELUG00000013477	celf3b	64	41.860
ENSELUG00000023043	elavl3	91	37.179	ENSELUG00000006377	tia1	70	37.179
ENSELUG00000023043	elavl3	63	36.111	ENSELUG00000009891	cirbpa	69	36.111
ENSELUG00000023043	elavl3	92	37.349	ENSELUG00000015062	-	59	37.349
ENSELUG00000023043	elavl3	74	33.908	ENSELUG00000007892	rbms2b	59	32.086
ENSELUG00000023043	elavl3	92	36.145	ENSELUG00000003195	pabpc4	58	36.145
ENSELUG00000023043	elavl3	61	39.726	ENSELUG00000019617	-	57	40.278
ENSELUG00000023043	elavl3	99	79.726	ENSELUG00000010026	ELAVL2	94	79.726
ENSELUG00000023043	elavl3	67	32.530	ENSELUG00000005389	-	72	32.530
ENSELUG00000023043	elavl3	61	35.616	ENSELUG00000004675	-	79	35.135

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000023043	elavl3	100	86.667	ENSG00000196361	ELAVL3	100	87.778	Homo_sapiens
ENSELUG00000023043	elavl3	99	96.857	ENSAPOG00000017565	elavl3	99	96.857	Acanthochromis_polyacanthus
ENSELUG00000023043	elavl3	99	86.072	ENSAMEG00000010487	ELAVL3	100	87.187	Ailuropoda_melanoleuca
ENSELUG00000023043	elavl3	99	96.857	ENSACIG00000024190	elavl3	99	96.857	Amphilophus_citrinellus
ENSELUG00000023043	elavl3	100	96.601	ENSAOCG00000005054	elavl3	100	96.601	Amphiprion_ocellaris
ENSELUG00000023043	elavl3	100	96.601	ENSAPEG00000011145	elavl3	100	96.601	Amphiprion_percula
ENSELUG00000023043	elavl3	98	97.695	ENSATEG00000020941	elavl3	100	97.695	Anabas_testudineus
ENSELUG00000023043	elavl3	98	89.751	ENSACAG00000016958	ELAVL3	93	89.751	Anolis_carolinensis
ENSELUG00000023043	elavl3	100	86.667	ENSANAG00000030798	ELAVL3	100	87.778	Aotus_nancymaae
ENSELUG00000023043	elavl3	98	97.688	ENSACLG00000018260	elavl3	98	97.688	Astatotilapia_calliptera
ENSELUG00000023043	elavl3	100	98.584	ENSAMXG00000040498	elavl3	100	98.584	Astyanax_mexicanus
ENSELUG00000023043	elavl3	100	86.944	ENSBTAG00000014412	ELAVL3	100	88.056	Bos_taurus
ENSELUG00000023043	elavl3	100	85.559	ENSCJAG00000005589	ELAVL3	100	86.649	Callithrix_jacchus
ENSELUG00000023043	elavl3	100	85.559	ENSCAFG00000017350	ELAVL3	100	86.649	Canis_familiaris
ENSELUG00000023043	elavl3	99	86.969	ENSCAFG00020004614	ELAVL3	96	89.766	Canis_lupus_dingo
ENSELUG00000023043	elavl3	99	85.714	ENSCHIG00000003436	ELAVL3	100	86.813	Capra_hircus
ENSELUG00000023043	elavl3	99	84.973	ENSTSYG00000036621	ELAVL3	100	86.066	Carlito_syrichta
ENSELUG00000023043	elavl3	88	85.271	ENSCAPG00000017620	ELAVL3	99	73.457	Cavia_aperea
ENSELUG00000023043	elavl3	88	85.271	ENSCPOG00000001793	ELAVL3	99	73.457	Cavia_porcellus
ENSELUG00000023043	elavl3	100	87.017	ENSCCAG00000034350	ELAVL3	100	88.122	Cebus_capucinus
ENSELUG00000023043	elavl3	100	85.559	ENSCATG00000044086	ELAVL3	100	86.649	Cercocebus_atys
ENSELUG00000023043	elavl3	100	85.286	ENSCLAG00000016404	ELAVL3	100	86.376	Chinchilla_lanigera
ENSELUG00000023043	elavl3	95	91.703	ENSCSAG00000006755	ELAVL3	99	91.703	Chlorocebus_sabaeus
ENSELUG00000023043	elavl3	100	89.444	ENSCPBG00000023982	ELAVL3	100	89.444	Chrysemys_picta_bellii
ENSELUG00000023043	elavl3	99	87.151	ENSCANG00000038728	ELAVL3	99	88.268	Colobus_angolensis_palliatus
ENSELUG00000023043	elavl3	100	85.014	ENSCGRG00001018927	Elavl3	100	86.104	Cricetulus_griseus_chok1gshd
ENSELUG00000023043	elavl3	100	84.741	ENSCGRG00000007158	Elavl3	100	85.831	Cricetulus_griseus_crigri
ENSELUG00000023043	elavl3	100	96.317	ENSCSEG00000021095	elavl3	100	96.317	Cynoglossus_semilaevis
ENSELUG00000023043	elavl3	100	98.017	ENSCVAG00000014060	elavl3	100	98.017	Cyprinodon_variegatus
ENSELUG00000023043	elavl3	100	96.884	ENSDARG00000014420	elavl3	100	96.884	Danio_rerio
ENSELUG00000023043	elavl3	99	85.154	ENSDORG00000002538	Elavl3	100	85.440	Dipodomys_ordii
ENSELUG00000023043	elavl3	100	85.559	ENSEASG00005004561	ELAVL3	100	86.649	Equus_asinus_asinus
ENSELUG00000023043	elavl3	98	88.439	ENSECAG00000020594	ELAVL3	100	89.595	Equus_caballus
ENSELUG00000023043	elavl3	100	85.559	ENSFCAG00000024763	ELAVL3	100	86.649	Felis_catus
ENSELUG00000023043	elavl3	100	87.347	ENSFDAG00000008449	ELAVL3	100	87.347	Fukomys_damarensis
ENSELUG00000023043	elavl3	98	97.688	ENSFHEG00000001675	elavl3	98	97.688	Fundulus_heteroclitus
ENSELUG00000023043	elavl3	100	95.822	ENSGMOG00000003760	elavl3	100	95.822	Gadus_morhua
ENSELUG00000023043	elavl3	50	59.055	ENSGALG00000054488	-	77	63.934	Gallus_gallus
ENSELUG00000023043	elavl3	58	75.591	ENSGALG00000047364	-	99	76.190	Gallus_gallus
ENSELUG00000023043	elavl3	98	96.591	ENSGAFG00000016015	elavl3	98	96.591	Gambusia_affinis
ENSELUG00000023043	elavl3	99	98.286	ENSGACG00000013839	elavl3	99	98.286	Gasterosteus_aculeatus
ENSELUG00000023043	elavl3	93	89.167	ENSGAGG00000016141	ELAVL3	97	91.102	Gopherus_agassizii
ENSELUG00000023043	elavl3	99	85.440	ENSGGOG00000008635	ELAVL3	100	86.538	Gorilla_gorilla
ENSELUG00000023043	elavl3	100	98.017	ENSHBUG00000020978	elavl3	100	98.017	Haplochromis_burtoni
ENSELUG00000023043	elavl3	83	66.333	ENSHGLG00000019379	-	97	66.333	Heterocephalus_glaber_female
ENSELUG00000023043	elavl3	100	85.559	ENSHGLG00000015199	ELAVL3	100	86.649	Heterocephalus_glaber_female
ENSELUG00000023043	elavl3	95	83.954	ENSHGLG00100011200	ELAVL3	100	85.100	Heterocephalus_glaber_male
ENSELUG00000023043	elavl3	100	98.300	ENSHCOG00000015894	elavl3	100	98.300	Hippocampus_comes
ENSELUG00000023043	elavl3	98	97.399	ENSIPUG00000013002	elavl3	97	97.399	Ictalurus_punctatus
ENSELUG00000023043	elavl3	100	85.559	ENSSTOG00000021111	ELAVL3	100	86.649	Ictidomys_tridecemlineatus
ENSELUG00000023043	elavl3	99	86.264	ENSJJAG00000023513	Elavl3	100	86.264	Jaculus_jaculus
ENSELUG00000023043	elavl3	99	96.857	ENSKMAG00000017412	elavl3	99	96.857	Kryptolebias_marmoratus
ENSELUG00000023043	elavl3	99	96.857	ENSLBEG00000008073	elavl3	100	95.141	Labrus_bergylta
ENSELUG00000023043	elavl3	100	93.716	ENSLOCG00000007647	elavl3	100	93.716	Lepisosteus_oculatus
ENSELUG00000023043	elavl3	99	85.014	ENSLAFG00000005013	ELAVL3	99	86.104	Loxodonta_africana
ENSELUG00000023043	elavl3	100	86.704	ENSMFAG00000003692	ELAVL3	100	87.812	Macaca_fascicularis
ENSELUG00000023043	elavl3	99	87.151	ENSMMUG00000020616	ELAVL3	100	88.268	Macaca_mulatta
ENSELUG00000023043	elavl3	100	86.704	ENSMNEG00000043973	ELAVL3	100	87.812	Macaca_nemestrina
ENSELUG00000023043	elavl3	97	83.539	ENSMLEG00000013976	ELAVL3	99	83.539	Mandrillus_leucophaeus
ENSELUG00000023043	elavl3	98	97.688	ENSMAMG00000011697	elavl3	99	97.688	Mastacembelus_armatus
ENSELUG00000023043	elavl3	100	96.601	ENSMZEG00005019053	elavl3	100	96.601	Maylandia_zebra
ENSELUG00000023043	elavl3	99	84.890	ENSMAUG00000016478	Elavl3	100	85.989	Mesocricetus_auratus
ENSELUG00000023043	elavl3	100	85.326	ENSMICG00000016528	ELAVL3	100	86.538	Microcebus_murinus
ENSELUG00000023043	elavl3	100	85.014	ENSMOCG00000002046	Elavl3	100	86.104	Microtus_ochrogaster
ENSELUG00000023043	elavl3	100	96.034	ENSMMOG00000012154	elavl3	99	96.034	Mola_mola
ENSELUG00000023043	elavl3	99	87.187	ENSMODG00000006653	ELAVL3	93	87.187	Monodelphis_domestica
ENSELUG00000023043	elavl3	99	95.787	ENSMALG00000016659	elavl3	99	95.787	Monopterus_albus
ENSELUG00000023043	elavl3	100	85.014	MGP_CAROLIEiJ_G0031894	Elavl3	100	88.068	Mus_caroli
ENSELUG00000023043	elavl3	100	85.014	ENSMUSG00000003410	Elavl3	100	86.104	Mus_musculus
ENSELUG00000023043	elavl3	100	84.741	MGP_PahariEiJ_G0014760	Elavl3	100	87.784	Mus_pahari
ENSELUG00000023043	elavl3	51	83.478	MGP_SPRETEiJ_G0033017	-	51	83.478	Mus_spretus
ENSELUG00000023043	elavl3	100	85.286	ENSMPUG00000005040	ELAVL3	100	86.376	Mustela_putorius_furo
ENSELUG00000023043	elavl3	99	86.376	ENSMLUG00000016320	ELAVL3	99	86.376	Myotis_lucifugus
ENSELUG00000023043	elavl3	100	85.559	ENSNGAG00000000968	Elavl3	100	86.649	Nannospalax_galili
ENSELUG00000023043	elavl3	100	95.543	ENSNBRG00000010319	elavl3	100	95.543	Neolamprologus_brichardi
ENSELUG00000023043	elavl3	99	88.736	ENSMEUG00000016706	ELAVL3	100	88.736	Notamacropus_eugenii
ENSELUG00000023043	elavl3	84	88.333	ENSOPRG00000007373	ELAVL3	97	88.333	Ochotona_princeps
ENSELUG00000023043	elavl3	100	85.559	ENSODEG00000015790	ELAVL3	100	86.649	Octodon_degus
ENSELUG00000023043	elavl3	99	95.787	ENSONIG00000001538	elavl3	99	95.787	Oreochromis_niloticus
ENSELUG00000023043	elavl3	88	88.492	ENSOANG00000015046	ELAVL3	98	88.492	Ornithorhynchus_anatinus
ENSELUG00000023043	elavl3	98	96.591	ENSORLG00000005379	elavl3	98	96.591	Oryzias_latipes
ENSELUG00000023043	elavl3	100	96.601	ENSORLG00020004570	elavl3	100	96.601	Oryzias_latipes_hni
ENSELUG00000023043	elavl3	98	96.601	ENSORLG00015000662	elavl3	99	96.601	Oryzias_latipes_hsok
ENSELUG00000023043	elavl3	98	97.688	ENSOMEG00000023959	elavl3	98	97.688	Oryzias_melastigma
ENSELUG00000023043	elavl3	100	85.559	ENSOGAG00000007072	ELAVL3	100	86.649	Otolemur_garnettii
ENSELUG00000023043	elavl3	100	85.831	ENSOARG00000018464	ELAVL3	100	86.921	Ovis_aries
ENSELUG00000023043	elavl3	100	85.559	ENSPPAG00000033972	ELAVL3	100	86.649	Pan_paniscus
ENSELUG00000023043	elavl3	100	85.559	ENSPPRG00000005151	ELAVL3	100	86.649	Panthera_pardus
ENSELUG00000023043	elavl3	97	86.095	ENSPTIG00000013610	ELAVL3	97	87.278	Panthera_tigris_altaica
ENSELUG00000023043	elavl3	100	85.559	ENSPTRG00000010506	ELAVL3	100	86.649	Pan_troglodytes
ENSELUG00000023043	elavl3	100	86.704	ENSPANG00000005849	ELAVL3	100	87.812	Papio_anubis
ENSELUG00000023043	elavl3	100	95.751	ENSPKIG00000016207	elavl3	100	95.751	Paramormyrops_kingsleyae
ENSELUG00000023043	elavl3	100	96.601	ENSPMGG00000002016	elavl3	100	96.601	Periophthalmus_magnuspinnatus
ENSELUG00000023043	elavl3	98	94.010	ENSPFOG00000007754	elavl3	100	94.010	Poecilia_formosa
ENSELUG00000023043	elavl3	99	97.135	ENSPLAG00000001547	elavl3	99	97.135	Poecilia_latipinna
ENSELUG00000023043	elavl3	98	97.695	ENSPMEG00000010156	elavl3	100	97.695	Poecilia_mexicana
ENSELUG00000023043	elavl3	98	97.688	ENSPREG00000006971	elavl3	98	97.688	Poecilia_reticulata
ENSELUG00000023043	elavl3	84	78.909	ENSPPYG00000009583	-	98	80.000	Pongo_abelii
ENSELUG00000023043	elavl3	83	86.842	ENSPCAG00000015952	ELAVL3	65	87.597	Procavia_capensis
ENSELUG00000023043	elavl3	100	85.559	ENSPCOG00000023781	ELAVL3	100	86.649	Propithecus_coquereli
ENSELUG00000023043	elavl3	100	85.559	ENSPVAG00000014893	ELAVL3	100	86.649	Pteropus_vampyrus
ENSELUG00000023043	elavl3	98	97.688	ENSPNYG00000013186	elavl3	96	97.688	Pundamilia_nyererei
ENSELUG00000023043	elavl3	98	97.688	ENSPNAG00000003633	elavl3	98	97.688	Pygocentrus_nattereri
ENSELUG00000023043	elavl3	100	85.014	ENSRNOG00000013752	Elavl3	100	86.104	Rattus_norvegicus
ENSELUG00000023043	elavl3	98	88.102	ENSRBIG00000034762	ELAVL3	99	89.235	Rhinopithecus_bieti
ENSELUG00000023043	elavl3	89	88.000	ENSRROG00000034305	ELAVL3	97	89.286	Rhinopithecus_roxellana
ENSELUG00000023043	elavl3	99	85.440	ENSSBOG00000030047	ELAVL3	100	90.705	Saimiri_boliviensis_boliviensis
ENSELUG00000023043	elavl3	95	93.886	ENSSHAG00000005583	ELAVL3	99	93.886	Sarcophilus_harrisii
ENSELUG00000023043	elavl3	98	92.754	ENSSFOG00015023630	elavl3	100	95.495	Scleropages_formosus
ENSELUG00000023043	elavl3	100	95.908	ENSSMAG00000004671	elavl3	99	97.399	Scophthalmus_maximus
ENSELUG00000023043	elavl3	99	96.857	ENSSDUG00000020708	elavl3	99	96.857	Seriola_dumerili
ENSELUG00000023043	elavl3	100	98.017	ENSSLDG00000013769	elavl3	100	98.017	Seriola_lalandi_dorsalis
ENSELUG00000023043	elavl3	99	75.616	ENSSARG00000005949	ELAVL3	100	76.712	Sorex_araneus
ENSELUG00000023043	elavl3	99	96.857	ENSSPAG00000000990	elavl3	99	96.857	Stegastes_partitus
ENSELUG00000023043	elavl3	100	85.559	ENSSSCG00000013617	ELAVL3	100	86.649	Sus_scrofa
ENSELUG00000023043	elavl3	98	97.695	ENSTRUG00000010719	elavl3	100	97.695	Takifugu_rubripes
ENSELUG00000023043	elavl3	99	94.986	ENSTNIG00000018572	elavl3	99	94.986	Tetraodon_nigroviridis
ENSELUG00000023043	elavl3	97	82.263	ENSTBEG00000006133	ELAVL3	100	83.486	Tupaia_belangeri
ENSELUG00000023043	elavl3	100	85.286	ENSTTRG00000001789	ELAVL3	100	86.376	Tursiops_truncatus
ENSELUG00000023043	elavl3	99	88.034	ENSUAMG00000000405	ELAVL3	98	89.174	Ursus_americanus
ENSELUG00000023043	elavl3	97	84.053	ENSUMAG00000019546	ELAVL3	88	85.382	Ursus_maritimus
ENSELUG00000023043	elavl3	100	86.667	ENSVVUG00000023733	ELAVL3	100	87.778	Vulpes_vulpes
ENSELUG00000023043	elavl3	99	89.773	ENSXETG00000016741	elavl3	99	89.773	Xenopus_tropicalis
ENSELUG00000023043	elavl3	98	97.688	ENSXMAG00000018287	elavl3	98	97.688	Xiphophorus_maculatus