EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000023173 (Gene tree)
Gene ID: 105017625
Gene Symbol: celf1
Alias: Bruno-like|brul|cb920|cugbp1
Full Name: CUGBP Elav-like family member 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 41842 bases
Position: chrLG02:2795458-2837299
Accession: 105017625
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000041977	RRM_1	PF00076.22	7.7e-50	1	3
ENSELUP00000041977	RRM_1	PF00076.22	7.7e-50	2	3
ENSELUP00000041977	RRM_1	PF00076.22	7.7e-50	3	3
ENSELUP00000024279	RRM_1	PF00076.22	9.3e-50	1	3
ENSELUP00000024279	RRM_1	PF00076.22	9.3e-50	2	3
ENSELUP00000024279	RRM_1	PF00076.22	9.3e-50	3	3
ENSELUP00000041995	RRM_1	PF00076.22	1.3e-49	1	3
ENSELUP00000041995	RRM_1	PF00076.22	1.3e-49	2	3
ENSELUP00000041995	RRM_1	PF00076.22	1.3e-49	3	3
ENSELUP00000024308	RRM_1	PF00076.22	1.3e-49	1	3
ENSELUP00000024308	RRM_1	PF00076.22	1.3e-49	2	3
ENSELUP00000024308	RRM_1	PF00076.22	1.3e-49	3	3
ENSELUP00000024317	RRM_1	PF00076.22	1.3e-49	1	3
ENSELUP00000024317	RRM_1	PF00076.22	1.3e-49	2	3
ENSELUP00000024317	RRM_1	PF00076.22	1.3e-49	3	3
ENSELUP00000042018	RRM_1	PF00076.22	9.9e-39	1	2
ENSELUP00000042018	RRM_1	PF00076.22	9.9e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000035711	-	4675	XM_010882349	ENSELUP00000024308	538 (aa)	XP_010880651	UPI0005761DEF
ENSELUT00000035717	-	4684	XM_020054699	ENSELUP00000024317	541 (aa)	XP_019910258	UPI0009733F89
ENSELUT00000035706	-	4549	-	ENSELUP00000042018	496 (aa)	-	-
ENSELUT00000035646	-	3184	XM_010882394	ENSELUP00000041995	534 (aa)	XP_010880696	UPI000577A23B
ENSELUT00000035753	-	1422	-	ENSELUP00000041977	473 (aa)	-	-
ENSELUT00000035676	-	4540	XM_010882482	ENSELUP00000024279	496 (aa)	XP_010880784	-

Gene Model

Click here to download ENSELUG00000023173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000023173's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000023173	celf1	68	36.047	ENSELUG00000001811	pabpc1l	57	36.047
ENSELUG00000023173	celf1	58	39.506	ENSELUG00000008025	elavl4	67	39.506
ENSELUG00000023173	celf1	98	45.791	ENSELUG00000007383	celf5b	86	65.414
ENSELUG00000023173	celf1	98	45.082	ENSELUG00000013477	celf3b	99	38.632
ENSELUG00000023173	celf1	100	46.061	ENSELUG00000018986	celf5a	68	63.433
ENSELUG00000023173	celf1	68	35.821	ENSELUG00000023043	elavl3	76	43.678
ENSELUG00000023173	celf1	54	39.474	ENSELUG00000006905	-	83	38.961
ENSELUG00000023173	celf1	63	41.237	ENSELUG00000003289	-	78	44.706
ENSELUG00000023173	celf1	98	45.684	ENSELUG00000006121	celf3a	88	58.451
ENSELUG00000023173	celf1	66	45.679	ENSELUG00000008024	elavl1a	79	45.679
ENSELUG00000023173	celf1	54	38.158	ENSELUG00000018923	rbms1a	52	36.264
ENSELUG00000023173	celf1	59	40.741	ENSELUG00000010026	ELAVL2	65	40.741
ENSELUG00000023173	celf1	100	73.849	ENSELUG00000005848	-	100	71.400
ENSELUG00000023173	celf1	58	36.364	ENSELUG00000007892	rbms2b	55	36.364
ENSELUG00000023173	celf1	69	80.488	ENSELUG00000024075	-	54	80.488
ENSELUG00000023173	celf1	100	66.398	ENSELUG00000008279	-	94	65.226

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000023173	celf1	100	84.886	ENSG00000149187	CELF1	100	87.368	Homo_sapiens
ENSELUG00000023173	celf1	100	92.000	ENSAPOG00000024000	celf1	100	93.200	Acanthochromis_polyacanthus
ENSELUG00000023173	celf1	100	83.135	ENSAMEG00000007596	CELF1	95	83.368	Ailuropoda_melanoleuca
ENSELUG00000023173	celf1	100	92.405	ENSACIG00000023843	celf1	100	92.194	Amphilophus_citrinellus
ENSELUG00000023173	celf1	100	91.600	ENSAOCG00000001252	celf1	100	92.800	Amphiprion_ocellaris
ENSELUG00000023173	celf1	100	91.800	ENSAPEG00000002340	celf1	97	93.028	Amphiprion_percula
ENSELUG00000023173	celf1	100	92.389	ENSATEG00000010871	celf1	100	92.389	Anabas_testudineus
ENSELUG00000023173	celf1	100	85.773	ENSACAG00000002114	CELF1	95	85.361	Anolis_carolinensis
ENSELUG00000023173	celf1	100	83.333	ENSANAG00000031770	CELF1	95	83.573	Aotus_nancymaae
ENSELUG00000023173	celf1	100	91.983	ENSACLG00000010181	-	100	91.561	Astatotilapia_calliptera
ENSELUG00000023173	celf1	100	94.567	ENSAMXG00000020576	celf1	100	93.458	Astyanax_mexicanus
ENSELUG00000023173	celf1	100	82.937	ENSBTAG00000002520	CELF1	100	83.368	Bos_taurus
ENSELUG00000023173	celf1	100	83.135	ENSCJAG00000020133	CELF1	95	83.826	Callithrix_jacchus
ENSELUG00000023173	celf1	100	83.333	ENSCAFG00000008452	CELF1	95	83.573	Canis_familiaris
ENSELUG00000023173	celf1	100	84.490	ENSCAFG00020025487	CELF1	100	84.082	Canis_lupus_dingo
ENSELUG00000023173	celf1	100	86.555	ENSCHIG00000024582	CELF1	95	86.134	Capra_hircus
ENSELUG00000023173	celf1	100	83.333	ENSTSYG00000003866	CELF1	100	83.573	Carlito_syrichta
ENSELUG00000023173	celf1	99	60.442	ENSCAPG00000006787	CELF1	94	61.446	Cavia_aperea
ENSELUG00000023173	celf1	100	82.937	ENSCPOG00000036381	CELF1	100	83.730	Cavia_porcellus
ENSELUG00000023173	celf1	100	85.595	ENSCCAG00000033487	CELF1	100	83.573	Cebus_capucinus
ENSELUG00000023173	celf1	100	83.333	ENSCATG00000040143	CELF1	100	83.929	Cercocebus_atys
ENSELUG00000023173	celf1	100	83.333	ENSCLAG00000011791	CELF1	100	80.159	Chinchilla_lanigera
ENSELUG00000023173	celf1	100	83.532	ENSCSAG00000005786	CELF1	95	83.778	Chlorocebus_sabaeus
ENSELUG00000023173	celf1	59	97.872	ENSCHOG00000004196	-	68	97.872	Choloepus_hoffmanni
ENSELUG00000023173	celf1	100	85.276	ENSCPBG00000022914	CELF1	100	84.082	Chrysemys_picta_bellii
ENSELUG00000023173	celf1	100	84.504	ENSCANG00000032689	CELF1	100	83.800	Colobus_angolensis_palliatus
ENSELUG00000023173	celf1	100	82.937	ENSCGRG00001011274	Celf1	95	83.162	Cricetulus_griseus_chok1gshd
ENSELUG00000023173	celf1	100	82.937	ENSCGRG00000015357	Celf1	95	83.162	Cricetulus_griseus_crigri
ENSELUG00000023173	celf1	100	80.873	ENSCSEG00000008675	celf1	100	79.668	Cynoglossus_semilaevis
ENSELUG00000023173	celf1	100	95.372	ENSDARG00000005315	celf1	100	95.609	Danio_rerio
ENSELUG00000023173	celf1	100	83.333	ENSDNOG00000009523	CELF1	100	83.929	Dasypus_novemcinctus
ENSELUG00000023173	celf1	100	78.526	ENSDORG00000013721	Celf1	96	77.311	Dipodomys_ordii
ENSELUG00000023173	celf1	75	90.698	ENSETEG00000004507	CELF1	83	90.698	Echinops_telfairi
ENSELUG00000023173	celf1	100	74.802	ENSEASG00005010831	CELF1	95	76.923	Equus_asinus_asinus
ENSELUG00000023173	celf1	100	84.886	ENSECAG00000007741	CELF1	100	84.472	Equus_caballus
ENSELUG00000023173	celf1	100	71.663	ENSEEUG00000009782	CELF1	100	71.253	Erinaceus_europaeus
ENSELUG00000023173	celf1	100	83.333	ENSFCAG00000002535	CELF1	100	83.573	Felis_catus
ENSELUG00000023173	celf1	100	85.391	ENSFALG00000006402	CELF1	95	84.661	Ficedula_albicollis
ENSELUG00000023173	celf1	100	82.937	ENSFDAG00000008517	CELF1	100	83.532	Fukomys_damarensis
ENSELUG00000023173	celf1	100	90.562	ENSGMOG00000012783	celf1	100	89.546	Gadus_morhua
ENSELUG00000023173	celf1	100	85.597	ENSGALG00000008097	CELF1	100	84.861	Gallus_gallus
ENSELUG00000023173	celf1	100	87.903	ENSGACG00000014226	celf1	98	85.659	Gasterosteus_aculeatus
ENSELUG00000023173	celf1	100	85.567	ENSGAGG00000011562	CELF1	100	85.155	Gopherus_agassizii
ENSELUG00000023173	celf1	100	83.135	ENSGGOG00000004106	CELF1	95	83.826	Gorilla_gorilla
ENSELUG00000023173	celf1	100	90.683	ENSHBUG00000017881	celf1	95	91.097	Haplochromis_burtoni
ENSELUG00000023173	celf1	100	78.643	ENSHGLG00000019214	-	100	78.244	Heterocephalus_glaber_female
ENSELUG00000023173	celf1	100	82.937	ENSHGLG00000006909	-	100	83.730	Heterocephalus_glaber_female
ENSELUG00000023173	celf1	100	80.439	ENSHGLG00100017423	-	100	79.713	Heterocephalus_glaber_male
ENSELUG00000023173	celf1	100	82.937	ENSHGLG00100013863	-	100	83.730	Heterocephalus_glaber_male
ENSELUG00000023173	celf1	100	89.050	ENSHCOG00000000258	celf1	100	89.050	Hippocampus_comes
ENSELUG00000023173	celf1	100	94.366	ENSIPUG00000023708	celf1	100	94.366	Ictalurus_punctatus
ENSELUG00000023173	celf1	100	83.333	ENSSTOG00000000613	CELF1	100	83.929	Ictidomys_tridecemlineatus
ENSELUG00000023173	celf1	100	83.333	ENSJJAG00000020280	Celf1	95	83.573	Jaculus_jaculus
ENSELUG00000023173	celf1	69	88.955	ENSLBEG00000002047	-	98	89.254	Labrus_bergylta
ENSELUG00000023173	celf1	100	91.511	ENSLBEG00000018296	celf1	90	96.889	Labrus_bergylta
ENSELUG00000023173	celf1	70	71.389	ENSLACG00000018990	CELF1	86	73.130	Latimeria_chalumnae
ENSELUG00000023173	celf1	100	94.779	ENSLOCG00000005966	celf1	96	93.910	Lepisosteus_oculatus
ENSELUG00000023173	celf1	100	83.762	ENSLAFG00000003484	CELF1	96	83.301	Loxodonta_africana
ENSELUG00000023173	celf1	100	84.504	ENSMFAG00000003505	CELF1	100	83.929	Macaca_fascicularis
ENSELUG00000023173	celf1	100	84.504	ENSMMUG00000011657	CELF1	99	83.865	Macaca_mulatta
ENSELUG00000023173	celf1	100	84.886	ENSMNEG00000022558	CELF1	100	84.472	Macaca_nemestrina
ENSELUG00000023173	celf1	100	84.504	ENSMLEG00000040834	CELF1	100	83.800	Mandrillus_leucophaeus
ENSELUG00000023173	celf1	100	92.194	ENSMAMG00000010052	celf1	100	91.772	Mastacembelus_armatus
ENSELUG00000023173	celf1	100	91.983	ENSMZEG00005018307	celf1	100	91.561	Maylandia_zebra
ENSELUG00000023173	celf1	100	85.259	ENSMGAG00000010629	CELF1	97	84.752	Meleagris_gallopavo
ENSELUG00000023173	celf1	100	82.937	ENSMAUG00000009468	Celf1	100	83.532	Mesocricetus_auratus
ENSELUG00000023173	celf1	100	83.135	ENSMICG00000045113	CELF1	95	83.826	Microcebus_murinus
ENSELUG00000023173	celf1	100	83.135	ENSMOCG00000012633	Celf1	100	83.730	Microtus_ochrogaster
ENSELUG00000023173	celf1	100	89.113	ENSMMOG00000015460	celf1	91	94.915	Mola_mola
ENSELUG00000023173	celf1	100	84.325	ENSMODG00000019913	CELF1	100	84.600	Monodelphis_domestica
ENSELUG00000023173	celf1	100	84.298	MGP_CAROLIEiJ_G0023949	Celf1	100	83.730	Mus_caroli
ENSELUG00000023173	celf1	100	84.298	ENSMUSG00000005506	Celf1	100	83.730	Mus_musculus
ENSELUG00000023173	celf1	100	84.298	MGP_PahariEiJ_G0025385	Celf1	100	83.730	Mus_pahari
ENSELUG00000023173	celf1	100	84.091	MGP_SPRETEiJ_G0024859	Celf1	100	82.540	Mus_spretus
ENSELUG00000023173	celf1	100	83.333	ENSMPUG00000003960	CELF1	89	83.037	Mustela_putorius_furo
ENSELUG00000023173	celf1	100	82.446	ENSMLUG00000016631	CELF1	95	82.941	Myotis_lucifugus
ENSELUG00000023173	celf1	100	80.698	ENSNGAG00000017390	Celf1	95	81.725	Nannospalax_galili
ENSELUG00000023173	celf1	99	60.460	ENSNBRG00000023547	-	85	59.800	Neolamprologus_brichardi
ENSELUG00000023173	celf1	100	84.504	ENSNLEG00000014638	CELF1	100	83.800	Nomascus_leucogenys
ENSELUG00000023173	celf1	100	84.524	ENSMEUG00000007763	CELF1	100	84.805	Notamacropus_eugenii
ENSELUG00000023173	celf1	100	82.540	ENSOPRG00000003239	-	100	82.752	Ochotona_princeps
ENSELUG00000023173	celf1	100	83.333	ENSODEG00000015204	CELF1	95	83.573	Octodon_degus
ENSELUG00000023173	celf1	100	90.890	ENSONIG00000008300	celf1	95	90.702	Oreochromis_niloticus
ENSELUG00000023173	celf1	100	84.325	ENSOANG00000007896	CELF1	95	84.813	Ornithorhynchus_anatinus
ENSELUG00000023173	celf1	100	83.333	ENSOCUG00000001311	CELF1	95	83.573	Oryctolagus_cuniculus
ENSELUG00000023173	celf1	100	87.164	ENSOMEG00000002381	celf1	100	86.486	Oryzias_melastigma
ENSELUG00000023173	celf1	100	83.910	ENSOGAG00000011600	CELF1	95	83.529	Otolemur_garnettii
ENSELUG00000023173	celf1	100	83.532	ENSOARG00000006924	CELF1	100	83.778	Ovis_aries
ENSELUG00000023173	celf1	100	83.333	ENSPPAG00000033870	CELF1	100	83.929	Pan_paniscus
ENSELUG00000023173	celf1	100	83.333	ENSPPRG00000002376	CELF1	100	83.573	Panthera_pardus
ENSELUG00000023173	celf1	100	83.333	ENSPTIG00000003974	CELF1	100	83.573	Panthera_tigris_altaica
ENSELUG00000023173	celf1	100	83.135	ENSPTRG00000052299	CELF1	100	83.929	Pan_troglodytes
ENSELUG00000023173	celf1	100	83.135	ENSPANG00000021676	CELF1	95	83.826	Papio_anubis
ENSELUG00000023173	celf1	100	92.484	ENSPKIG00000012324	celf1	100	92.742	Paramormyrops_kingsleyae
ENSELUG00000023173	celf1	100	82.041	ENSPSIG00000003922	CELF1	95	81.224	Pelodiscus_sinensis
ENSELUG00000023173	celf1	100	84.144	ENSPMGG00000013192	celf1	95	82.911	Periophthalmus_magnuspinnatus
ENSELUG00000023173	celf1	100	83.135	ENSPEMG00000015644	Celf1	100	83.730	Peromyscus_maniculatus_bairdii
ENSELUG00000023173	celf1	100	84.722	ENSPCIG00000022947	CELF1	97	85.421	Phascolarctos_cinereus
ENSELUG00000023173	celf1	72	72.346	ENSPFOG00000000961	-	100	74.251	Poecilia_formosa
ENSELUG00000023173	celf1	89	74.566	ENSPLAG00000019373	-	85	72.543	Poecilia_latipinna
ENSELUG00000023173	celf1	100	78.351	ENSPREG00000022185	-	95	76.786	Poecilia_reticulata
ENSELUG00000023173	celf1	100	82.574	ENSPPYG00000003302	CELF1	95	83.197	Pongo_abelii
ENSELUG00000023173	celf1	100	81.109	ENSPCAG00000002631	CELF1	100	82.136	Procavia_capensis
ENSELUG00000023173	celf1	100	78.175	ENSPCOG00000021865	CELF1	95	80.079	Propithecus_coquereli
ENSELUG00000023173	celf1	98	82.883	ENSPVAG00000007340	CELF1	100	83.138	Pteropus_vampyrus
ENSELUG00000023173	celf1	80	80.172	ENSPNYG00000023719	-	88	79.697	Pundamilia_nyererei
ENSELUG00000023173	celf1	100	95.372	ENSPNAG00000013418	celf1	100	94.206	Pygocentrus_nattereri
ENSELUG00000023173	celf1	100	82.738	ENSRNOG00000010379	Celf1	100	83.532	Rattus_norvegicus
ENSELUG00000023173	celf1	100	83.135	ENSRBIG00000042406	CELF1	95	83.826	Rhinopithecus_bieti
ENSELUG00000023173	celf1	100	83.333	ENSRROG00000032588	CELF1	95	83.573	Rhinopithecus_roxellana
ENSELUG00000023173	celf1	100	78.361	ENSSBOG00000021912	CELF1	94	77.521	Saimiri_boliviensis_boliviensis
ENSELUG00000023173	celf1	100	84.524	ENSSHAG00000017438	CELF1	100	85.119	Sarcophilus_harrisii
ENSELUG00000023173	celf1	100	94.153	ENSSFOG00015019353	celf1	100	93.258	Scleropages_formosus
ENSELUG00000023173	celf1	100	90.909	ENSSMAG00000013827	celf1	100	87.246	Scophthalmus_maximus
ENSELUG00000023173	celf1	100	90.909	ENSSDUG00000011558	celf1	100	87.061	Seriola_dumerili
ENSELUG00000023173	celf1	100	91.116	ENSSLDG00000012863	celf1	100	87.246	Seriola_lalandi_dorsalis
ENSELUG00000023173	celf1	100	78.439	ENSSARG00000003207	CELF1	100	79.466	Sorex_araneus
ENSELUG00000023173	celf1	100	85.510	ENSSPUG00000004228	CELF1	95	84.694	Sphenodon_punctatus
ENSELUG00000023173	celf1	100	91.400	ENSSPAG00000009569	celf1	100	92.600	Stegastes_partitus
ENSELUG00000023173	celf1	100	83.333	ENSSSCG00000013233	CELF1	100	83.573	Sus_scrofa
ENSELUG00000023173	celf1	100	85.481	ENSTGUG00000010377	CELF1	95	85.072	Taeniopygia_guttata
ENSELUG00000023173	celf1	100	69.796	ENSTRUG00000000617	celf1	100	68.836	Takifugu_rubripes
ENSELUG00000023173	celf1	80	92.715	ENSTBEG00000005140	CELF1	80	92.593	Tupaia_belangeri
ENSELUG00000023173	celf1	100	83.333	ENSTTRG00000014157	CELF1	100	83.573	Tursiops_truncatus
ENSELUG00000023173	celf1	90	81.718	ENSUAMG00000000223	CELF1	95	81.400	Ursus_americanus
ENSELUG00000023173	celf1	100	83.333	ENSUMAG00000009218	CELF1	95	83.573	Ursus_maritimus
ENSELUG00000023173	celf1	80	94.382	ENSVPAG00000000336	CELF1	87	94.382	Vicugna_pacos
ENSELUG00000023173	celf1	100	83.333	ENSVVUG00000023439	CELF1	100	83.573	Vulpes_vulpes
ENSELUG00000023173	celf1	100	83.301	ENSXETG00000009044	celf1	100	80.769	Xenopus_tropicalis
ENSELUG00000023173	celf1	89	62.040	ENSXCOG00000017706	-	87	64.225	Xiphophorus_couchianus
ENSELUG00000023173	celf1	100	79.046	ENSXMAG00000029339	-	100	79.253	Xiphophorus_maculatus