EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000023219 (Gene tree)
Gene ID
105014213
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Minus strand
Length
18357 bases
Position
chrLG13:11156066-11174422
Accession
105014213
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000042128RRM_1PF00076.226.3e-3212
ENSELUP00000042128RRM_1PF00076.226.3e-3222
ENSELUP00000024447RRM_1PF00076.226.3e-3212
ENSELUP00000024447RRM_1PF00076.226.3e-3222
ENSELUP00000024453RRM_1PF00076.226.7e-3212
ENSELUP00000024453RRM_1PF00076.226.7e-3222
ENSELUP00000024459RRM_1PF00076.226.8e-3212
ENSELUP00000024459RRM_1PF00076.226.8e-3222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000043122MSI1-2033091XM_010876333ENSELUP00000024453386 (aa)XP_010874635-
ENSELUT00000035923MSI1-2023627XM_010876338ENSELUP00000042128378 (aa)XP_010874640-
ENSELUT00000035893MSI1-2013073-ENSELUP00000024447380 (aa)--
ENSELUT00000043125MSI1-2043660-ENSELUP00000024459389 (aa)--
Gene Model
Click here to download ENSELUG00000023219's gene model file
Pathways
Pathway IDPathway NameSource
els03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000023219's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000023219MSI17830.968ENSELUG00000020994tial19331.944
ENSELUG00000023219MSI19283.046ENSELUG00000023280-10082.759
ENSELUG00000023219MSI15037.500ENSELUG00000023080hnrnpa37636.564
ENSELUG00000023219MSI19265.672ENSELUG00000001361msi2b9465.282
ENSELUG00000023219MSI15038.743ENSELUG00000007372-5140.341
ENSELUG00000023219MSI15043.719ENSELUG00000003241hnrnpdl8139.535
ENSELUG00000023219MSI19267.463ENSELUG00000011747msi2a9467.463
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000023219MSI19280.387ENSG00000135097MSI19980.478Homo_sapiens
ENSELUG00000023219MSI19290.544ENSAPOG00000023458-9490.544Acanthochromis_polyacanthus
ENSELUG00000023219MSI19285.960ENSAPOG00000003191MSI19485.960Acanthochromis_polyacanthus
ENSELUG00000023219MSI19265.087ENSAMEG00000013302MSI110065.087Ailuropoda_melanoleuca
ENSELUG00000023219MSI18882.188ENSACIG00000017754-8579.718Amphilophus_citrinellus
ENSELUG00000023219MSI19285.960ENSAOCG00000003804MSI19485.960Amphiprion_ocellaris
ENSELUG00000023219MSI19380.618ENSAOCG00000009031-9880.618Amphiprion_ocellaris
ENSELUG00000023219MSI19285.960ENSAPEG00000003245MSI19485.960Amphiprion_percula
ENSELUG00000023219MSI19290.544ENSAPEG00000006857-7990.544Amphiprion_percula
ENSELUG00000023219MSI19279.023ENSATEG00000023779-9676.323Anabas_testudineus
ENSELUG00000023219MSI19290.476ENSATEG00000017059MSI19590.208Anabas_testudineus
ENSELUG00000023219MSI19281.667ENSACAG00000002762MSI19481.667Anolis_carolinensis
ENSELUG00000023219MSI19280.387ENSANAG00000027151MSI19480.387Aotus_nancymaae
ENSELUG00000023219MSI17382.079ENSANAG00000027901-8882.079Aotus_nancymaae
ENSELUG00000023219MSI19290.544ENSACLG00000000117-10090.517Astatotilapia_calliptera
ENSELUG00000023219MSI19286.533ENSACLG00000011230MSI19486.533Astatotilapia_calliptera
ENSELUG00000023219MSI19286.136ENSAMXG00000038960msi17686.136Astyanax_mexicanus
ENSELUG00000023219MSI19280.387ENSBTAG00000009800MSI110080.332Bos_taurus
ENSELUG00000023219MSI19280.387ENSCJAG00000008578MSI19480.387Callithrix_jacchus
ENSELUG00000023219MSI19280.110ENSCAFG00000010283MSI19480.110Canis_familiaris
ENSELUG00000023219MSI19280.060ENSCAFG00020020585MSI110080.060Canis_lupus_dingo
ENSELUG00000023219MSI19278.729ENSCHIG00000024304MSI19877.929Capra_hircus
ENSELUG00000023219MSI19279.539ENSTSYG00000033949MSI19579.539Carlito_syrichta
ENSELUG00000023219MSI19272.372ENSCAPG00000003919MSI18972.372Cavia_aperea
ENSELUG00000023219MSI19280.387ENSCPOG00000012361MSI110080.387Cavia_porcellus
ENSELUG00000023219MSI19280.387ENSCCAG00000035567MSI19480.387Cebus_capucinus
ENSELUG00000023219MSI19280.387ENSCATG00000030019MSI19877.901Cercocebus_atys
ENSELUG00000023219MSI19280.387ENSCLAG00000011329MSI110080.387Chinchilla_lanigera
ENSELUG00000023219MSI17082.510ENSCSAG00000002265MSI18981.481Chlorocebus_sabaeus
ENSELUG00000023219MSI19283.191ENSCPBG00000011349MSI19483.191Chrysemys_picta_bellii
ENSELUG00000023219MSI19279.598ENSCANG00000040651MSI110079.598Colobus_angolensis_palliatus
ENSELUG00000023219MSI19280.387ENSCGRG00001018883Msi19480.387Cricetulus_griseus_chok1gshd
ENSELUG00000023219MSI19279.656ENSCGRG00000002191Msi17279.656Cricetulus_griseus_crigri
ENSELUG00000023219MSI19281.322ENSCSEG00000011032MSI19685.714Cynoglossus_semilaevis
ENSELUG00000023219MSI19285.100ENSCSEG00000005834-9485.100Cynoglossus_semilaevis
ENSELUG00000023219MSI19289.398ENSCSEG00000008352-9688.393Cynoglossus_semilaevis
ENSELUG00000023219MSI19291.117ENSCVAG00000009100MSI19689.583Cyprinodon_variegatus
ENSELUG00000023219MSI16366.387ENSCVAG00000017463-8965.966Cyprinodon_variegatus
ENSELUG00000023219MSI19282.388ENSDARG00000010710msi110089.427Danio_rerio
ENSELUG00000023219MSI17886.017ENSDARG00000102015CABZ01037298.19186.017Danio_rerio
ENSELUG00000023219MSI19277.083ENSDNOG00000005713MSI19177.083Dasypus_novemcinctus
ENSELUG00000023219MSI19279.096ENSDORG00000005610Msi19479.096Dipodomys_ordii
ENSELUG00000023219MSI19277.011ENSETEG00000004756MSI110076.724Echinops_telfairi
ENSELUG00000023219MSI19280.387ENSEASG00005004736MSI19679.943Equus_asinus_asinus
ENSELUG00000023219MSI19379.620ENSECAG00000017526MSI19480.387Equus_caballus
ENSELUG00000023219MSI19280.387ENSFCAG00000011007MSI19480.387Felis_catus
ENSELUG00000023219MSI19283.438ENSFALG00000007574MSI110083.438Ficedula_albicollis
ENSELUG00000023219MSI19279.310ENSFDAG00000019586MSI110079.310Fukomys_damarensis
ENSELUG00000023219MSI19290.258ENSFHEG00000022446MSI19490.258Fundulus_heteroclitus
ENSELUG00000023219MSI19285.960ENSFHEG00000003560-9485.960Fundulus_heteroclitus
ENSELUG00000023219MSI19277.273ENSGMOG00000017838-9477.273Gadus_morhua
ENSELUG00000023219MSI19288.539ENSGMOG00000001006MSI19488.252Gadus_morhua
ENSELUG00000023219MSI19282.979ENSGALG00000007227MSI19674.541Gallus_gallus
ENSELUG00000023219MSI19782.337ENSGAFG00000021522MSI19882.337Gambusia_affinis
ENSELUG00000023219MSI18970.501ENSGAFG00000005860-9670.501Gambusia_affinis
ENSELUG00000023219MSI19290.544ENSGACG00000012679MSI19490.544Gasterosteus_aculeatus
ENSELUG00000023219MSI19278.670ENSGACG00000008674-9478.670Gasterosteus_aculeatus
ENSELUG00000023219MSI19283.191ENSGAGG00000016037MSI19683.136Gopherus_agassizii
ENSELUG00000023219MSI19279.940ENSGGOG00000010328MSI110079.940Gorilla_gorilla
ENSELUG00000023219MSI19290.544ENSHBUG00000011841-9490.544Haplochromis_burtoni
ENSELUG00000023219MSI19286.533ENSHBUG00000021921MSI19486.533Haplochromis_burtoni
ENSELUG00000023219MSI19280.110ENSHGLG00000012782MSI19480.110Heterocephalus_glaber_female
ENSELUG00000023219MSI19279.310ENSHGLG00100016848MSI110079.310Heterocephalus_glaber_male
ENSELUG00000023219MSI18884.431ENSHCOG00000012019MSI19684.431Hippocampus_comes
ENSELUG00000023219MSI19288.690ENSHCOG00000012067-9683.235Hippocampus_comes
ENSELUG00000023219MSI19286.819ENSIPUG00000001976msi19586.819Ictalurus_punctatus
ENSELUG00000023219MSI19280.060ENSSTOG00000009799MSI110080.060Ictidomys_tridecemlineatus
ENSELUG00000023219MSI19280.387ENSJJAG00000010463Msi19878.729Jaculus_jaculus
ENSELUG00000023219MSI19267.956ENSJJAG00000010643-9969.253Jaculus_jaculus
ENSELUG00000023219MSI19289.112ENSKMAG00000011251MSI19489.112Kryptolebias_marmoratus
ENSELUG00000023219MSI19279.885ENSKMAG00000019877-9684.127Kryptolebias_marmoratus
ENSELUG00000023219MSI19286.246ENSLBEG00000001375-9486.246Labrus_bergylta
ENSELUG00000023219MSI19290.258ENSLBEG00000008789MSI19690.179Labrus_bergylta
ENSELUG00000023219MSI19280.495ENSLACG00000018287MSI110080.495Latimeria_chalumnae
ENSELUG00000023219MSI18871.225ENSLAFG00000009412MSI110071.225Loxodonta_africana
ENSELUG00000023219MSI19280.387ENSMFAG00000001798MSI110080.387Macaca_fascicularis
ENSELUG00000023219MSI19280.387ENSMMUG00000031527MSI19780.165Macaca_mulatta
ENSELUG00000023219MSI19280.387ENSMNEG00000040034MSI19679.943Macaca_nemestrina
ENSELUG00000023219MSI19279.598ENSMLEG00000003921MSI110079.598Mandrillus_leucophaeus
ENSELUG00000023219MSI19285.387ENSMAMG00000018426-9485.387Mastacembelus_armatus
ENSELUG00000023219MSI19289.685ENSMAMG00000002279MSI19489.685Mastacembelus_armatus
ENSELUG00000023219MSI19286.533ENSMZEG00005026892MSI19486.533Maylandia_zebra
ENSELUG00000023219MSI19290.544ENSMZEG00005000340-9689.881Maylandia_zebra
ENSELUG00000023219MSI15893.491ENSMGAG00000016518-10093.491Meleagris_gallopavo
ENSELUG00000023219MSI16784.375ENSMAUG00000016820Msi110084.375Mesocricetus_auratus
ENSELUG00000023219MSI19280.387ENSMICG00000033181MSI19480.387Microcebus_murinus
ENSELUG00000023219MSI19280.110ENSMOCG00000002286Msi19480.110Microtus_ochrogaster
ENSELUG00000023219MSI19278.779ENSMMOG00000012265-9978.779Mola_mola
ENSELUG00000023219MSI19477.285ENSMMOG00000010492MSI19282.911Mola_mola
ENSELUG00000023219MSI18857.185ENSMODG00000003189-10055.556Monodelphis_domestica
ENSELUG00000023219MSI19290.544ENSMALG00000017889MSI19490.544Monopterus_albus
ENSELUG00000023219MSI19285.057ENSMALG00000001426-10085.057Monopterus_albus
ENSELUG00000023219MSI19280.110MGP_CAROLIEiJ_G0027626Msi19882.979Mus_caroli
ENSELUG00000023219MSI19282.267ENSMUSG00000054256Msi19982.267Mus_musculus
ENSELUG00000023219MSI19282.286MGP_PahariEiJ_G0024206Msi19882.562Mus_pahari
ENSELUG00000023219MSI19280.110MGP_SPRETEiJ_G0028624Msi19882.979Mus_spretus
ENSELUG00000023219MSI19280.060ENSMPUG00000003168MSI110080.060Mustela_putorius_furo
ENSELUG00000023219MSI19272.034ENSMLUG00000010313MSI110072.034Myotis_lucifugus
ENSELUG00000023219MSI19279.656ENSNGAG00000014508Msi19179.656Nannospalax_galili
ENSELUG00000023219MSI19290.544ENSNBRG00000000841-9689.881Neolamprologus_brichardi
ENSELUG00000023219MSI19277.358ENSNBRG00000018012MSI19977.358Neolamprologus_brichardi
ENSELUG00000023219MSI18870.690ENSNLEG00000015636MSI110070.690Nomascus_leucogenys
ENSELUG00000023219MSI19261.494ENSMEUG00000015759MSI18873.510Notamacropus_eugenii
ENSELUG00000023219MSI18774.390ENSOPRG00000016879MSI110074.390Ochotona_princeps
ENSELUG00000023219MSI19279.598ENSODEG00000006328MSI110079.598Octodon_degus
ENSELUG00000023219MSI19290.544ENSONIG00000011182MSI19490.544Oreochromis_niloticus
ENSELUG00000023219MSI19283.425ENSONIG00000019452-9483.425Oreochromis_niloticus
ENSELUG00000023219MSI19280.060ENSOCUG00000027716MSI110080.060Oryctolagus_cuniculus
ENSELUG00000023219MSI19285.100ENSORLG00000029593MSI19485.100Oryzias_latipes
ENSELUG00000023219MSI19290.544ENSORLG00000019978-9490.544Oryzias_latipes
ENSELUG00000023219MSI19290.544ENSORLG00020001208-6790.544Oryzias_latipes_hni
ENSELUG00000023219MSI19285.100ENSORLG00020008266MSI19684.494Oryzias_latipes_hni
ENSELUG00000023219MSI19290.544ENSORLG00015013672-7389.881Oryzias_latipes_hsok
ENSELUG00000023219MSI19285.100ENSORLG00015003916MSI19684.494Oryzias_latipes_hsok
ENSELUG00000023219MSI19290.544ENSOMEG00000017536MSI110085.920Oryzias_melastigma
ENSELUG00000023219MSI19583.056ENSOMEG00000002272-10082.597Oryzias_melastigma
ENSELUG00000023219MSI19279.726ENSOGAG00000003847MSI19879.726Otolemur_garnettii
ENSELUG00000023219MSI19276.857ENSOARG00000012097MSI110076.857Ovis_aries
ENSELUG00000023219MSI19279.598ENSPPAG00000043073MSI110079.598Pan_paniscus
ENSELUG00000023219MSI19280.387ENSPPRG00000000370MSI19480.387Panthera_pardus
ENSELUG00000023219MSI19280.060ENSPTIG00000008913MSI110080.060Panthera_tigris_altaica
ENSELUG00000023219MSI19280.387ENSPTRG00000005531MSI19878.177Pan_troglodytes
ENSELUG00000023219MSI19280.110ENSPANG00000006335MSI19480.110Papio_anubis
ENSELUG00000023219MSI19287.106ENSPKIG00000023575-9487.106Paramormyrops_kingsleyae
ENSELUG00000023219MSI19287.679ENSPKIG00000016497MSI19688.095Paramormyrops_kingsleyae
ENSELUG00000023219MSI19776.694ENSPSIG00000011608-9876.694Pelodiscus_sinensis
ENSELUG00000023219MSI17874.194ENSPSIG00000009621-10074.194Pelodiscus_sinensis
ENSELUG00000023219MSI19469.359ENSPMGG00000007743-9267.536Periophthalmus_magnuspinnatus
ENSELUG00000023219MSI18489.274ENSPMGG00000000514MSI19889.274Periophthalmus_magnuspinnatus
ENSELUG00000023219MSI19278.431ENSPEMG00000010491Msi19578.431Peromyscus_maniculatus_bairdii
ENSELUG00000023219MSI19290.544ENSPFOG00000013113MSI19490.544Poecilia_formosa
ENSELUG00000023219MSI19285.673ENSPFOG00000008319-8185.673Poecilia_formosa
ENSELUG00000023219MSI19290.544ENSPLAG00000014025-9490.544Poecilia_latipinna
ENSELUG00000023219MSI19285.673ENSPLAG00000012431-9185.673Poecilia_latipinna
ENSELUG00000023219MSI19290.544ENSPMEG00000012796MSI19689.583Poecilia_mexicana
ENSELUG00000023219MSI19285.100ENSPMEG00000007025-9875.272Poecilia_mexicana
ENSELUG00000023219MSI18880.357ENSPREG00000021416-9975.410Poecilia_reticulata
ENSELUG00000023219MSI17675.934ENSPREG00000014574-10075.934Poecilia_reticulata
ENSELUG00000023219MSI19279.558ENSPPYG00000005027MSI19479.558Pongo_abelii
ENSELUG00000023219MSI17484.762ENSPCAG00000002300MSI17284.762Procavia_capensis
ENSELUG00000023219MSI19280.387ENSPCOG00000017341MSI19878.729Propithecus_coquereli
ENSELUG00000023219MSI18088.889ENSPVAG00000002225MSI18888.889Pteropus_vampyrus
ENSELUG00000023219MSI19286.533ENSPNYG00000004379MSI19486.533Pundamilia_nyererei
ENSELUG00000023219MSI19290.544ENSPNYG00000002529-9490.544Pundamilia_nyererei
ENSELUG00000023219MSI19286.533ENSPNAG00000019337msi19486.533Pygocentrus_nattereri
ENSELUG00000023219MSI19280.060ENSRNOG00000001156Msi110080.060Rattus_norvegicus
ENSELUG00000023219MSI19280.060ENSRBIG00000036889MSI110080.060Rhinopithecus_bieti
ENSELUG00000023219MSI19279.429ENSRROG00000041076MSI19379.429Rhinopithecus_roxellana
ENSELUG00000023219MSI19280.441ENSSBOG00000030259MSI19980.441Saimiri_boliviensis_boliviensis
ENSELUG00000023219MSI19270.552ENSSHAG00000006834MSI110070.552Sarcophilus_harrisii
ENSELUG00000023219MSI19288.636ENSSFOG00015005350MSI19688.636Scleropages_formosus
ENSELUG00000023219MSI19289.112ENSSFOG00015014964-9787.989Scleropages_formosus
ENSELUG00000023219MSI19284.397ENSSMAG00000009156-7682.511Scophthalmus_maximus
ENSELUG00000023219MSI19284.524ENSSMAG00000018824MSI19488.562Scophthalmus_maximus
ENSELUG00000023219MSI19286.246ENSSDUG00000022697-9486.246Seriola_dumerili
ENSELUG00000023219MSI19290.831ENSSDUG00000001027MSI19490.831Seriola_dumerili
ENSELUG00000023219MSI19290.831ENSSLDG00000016832MSI19690.476Seriola_lalandi_dorsalis
ENSELUG00000023219MSI19275.910ENSSLDG00000018706-9975.910Seriola_lalandi_dorsalis
ENSELUG00000023219MSI19283.191ENSSPUG00000015741MSI110083.191Sphenodon_punctatus
ENSELUG00000023219MSI17670.130ENSSPAG00000014085-10070.130Stegastes_partitus
ENSELUG00000023219MSI19286.207ENSSPAG00000013098-10086.207Stegastes_partitus
ENSELUG00000023219MSI15083.750ENSSPAG00000015573zgc:1107968283.750Stegastes_partitus
ENSELUG00000023219MSI19280.110ENSSSCG00000029365MSI110079.758Sus_scrofa
ENSELUG00000023219MSI19281.389ENSTGUG00000009534MSI110081.389Taeniopygia_guttata
ENSELUG00000023219MSI18085.714ENSTRUG00000016249MSI110078.467Takifugu_rubripes
ENSELUG00000023219MSI19275.298ENSTRUG00000015636-7975.298Takifugu_rubripes
ENSELUG00000023219MSI19286.080ENSTNIG00000011469MSI19486.080Tetraodon_nigroviridis
ENSELUG00000023219MSI19258.640ENSTNIG00000019814-9559.189Tetraodon_nigroviridis
ENSELUG00000023219MSI19270.990ENSTBEG00000007182MSI110070.648Tupaia_belangeri
ENSELUG00000023219MSI17384.588ENSTTRG00000005663MSI17884.588Tursiops_truncatus
ENSELUG00000023219MSI16387.923ENSUAMG00000015514MSI19187.923Ursus_americanus
ENSELUG00000023219MSI19276.453ENSUMAG00000006176MSI18876.453Ursus_maritimus
ENSELUG00000023219MSI19279.656ENSVVUG00000020993MSI110079.037Vulpes_vulpes
ENSELUG00000023219MSI19280.802ENSXETG00000012216msi19480.802Xenopus_tropicalis
ENSELUG00000023219MSI19767.391ENSXCOG00000017605MSI19467.391Xiphophorus_couchianus
ENSELUG00000023219MSI19285.100ENSXMAG00000018237-9485.100Xiphophorus_maculatus
ENSELUG00000023219MSI19289.971ENSXMAG00000027103MSI19681.341Xiphophorus_maculatus

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