EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000023232 (Gene tree)
Gene ID: 105012134
Gene Symbol: -
Alias: -
Full Name: transcription activator BRG1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 16417 bases
Position: chrLG09:12188149-12204565
Accession: 105012134
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000024408	ResIII	PF04851.15	5.9e-10	1	1
ENSELUP00000024408	BRK	PF07533.16	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000043109	-	4440	XM_020049786	ENSELUP00000024408	1479 (aa)	XP_019905345	-

Gene Model

Click here to download ENSELUG00000023232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000023232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000023232	-	99	81.428	ENSELUG00000010247	smarca4a	99	81.182
ENSELUG00000023232	-	91	70.469	ENSELUG00000010318	smarca2	93	69.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000023232	-	93	85.791	ENSG00000127616	SMARCA4	99	93.948	Homo_sapiens
ENSELUG00000023232	-	79	87.192	ENSAPOG00000003509	smarca4a	99	86.284	Acanthochromis_polyacanthus
ENSELUG00000023232	-	94	84.846	ENSAPOG00000004542	SMARCA4	99	83.885	Acanthochromis_polyacanthus
ENSELUG00000023232	-	93	80.276	ENSAMEG00000010868	SMARCA4	99	75.090	Ailuropoda_melanoleuca
ENSELUG00000023232	-	90	84.902	ENSACIG00000003035	-	97	85.000	Amphilophus_citrinellus
ENSELUG00000023232	-	97	79.278	ENSACIG00000021550	smarca4a	98	79.960	Amphilophus_citrinellus
ENSELUG00000023232	-	88	80.045	ENSAOCG00000019167	smarca4a	100	79.544	Amphiprion_ocellaris
ENSELUG00000023232	-	91	88.114	ENSAOCG00000009450	-	97	81.710	Amphiprion_ocellaris
ENSELUG00000023232	-	88	80.194	ENSAPEG00000015559	smarca4a	100	79.686	Amphiprion_percula
ENSELUG00000023232	-	96	87.056	ENSAPEG00000023108	-	98	84.045	Amphiprion_percula
ENSELUG00000023232	-	98	85.735	ENSATEG00000001094	-	99	83.421	Anabas_testudineus
ENSELUG00000023232	-	97	79.161	ENSATEG00000011524	smarca4a	99	81.318	Anabas_testudineus
ENSELUG00000023232	-	94	85.844	ENSANAG00000036991	SMARCA4	99	75.033	Aotus_nancymaae
ENSELUG00000023232	-	94	79.373	ENSACLG00000000163	smarca4a	99	78.849	Astatotilapia_calliptera
ENSELUG00000023232	-	94	85.505	ENSACLG00000008638	-	98	83.111	Astatotilapia_calliptera
ENSELUG00000023232	-	97	80.392	ENSAMXG00000021023	smarca4a	99	80.000	Astyanax_mexicanus
ENSELUG00000023232	-	93	80.221	ENSAMXG00000011238	-	99	82.783	Astyanax_mexicanus
ENSELUG00000023232	-	98	78.944	ENSBTAG00000019220	SMARCA4	99	78.225	Bos_taurus
ENSELUG00000023232	-	90	88.755	ENSCJAG00000005936	SMARCA4	94	83.661	Callithrix_jacchus
ENSELUG00000023232	-	93	85.988	ENSCAFG00000017584	SMARCA4	99	77.409	Canis_familiaris
ENSELUG00000023232	-	93	85.988	ENSCAFG00020024620	SMARCA4	96	80.827	Canis_lupus_dingo
ENSELUG00000023232	-	94	85.680	ENSCHIG00000015318	SMARCA4	93	85.579	Capra_hircus
ENSELUG00000023232	-	96	85.649	ENSTSYG00000012966	SMARCA4	99	78.967	Carlito_syrichta
ENSELUG00000023232	-	93	76.944	ENSCAPG00000015932	SMARCA4	99	77.106	Cavia_aperea
ENSELUG00000023232	-	94	85.974	ENSCPOG00000015549	SMARCA4	99	78.172	Cavia_porcellus
ENSELUG00000023232	-	93	84.142	ENSCCAG00000031660	SMARCA4	98	74.984	Cebus_capucinus
ENSELUG00000023232	-	93	85.988	ENSCATG00000029530	SMARCA4	99	77.472	Cercocebus_atys
ENSELUG00000023232	-	98	78.188	ENSCLAG00000011946	SMARCA4	99	79.583	Chinchilla_lanigera
ENSELUG00000023232	-	98	78.034	ENSCPBG00000009994	SMARCA4	99	78.800	Chrysemys_picta_bellii
ENSELUG00000023232	-	93	85.988	ENSCANG00000036013	SMARCA4	99	77.534	Colobus_angolensis_palliatus
ENSELUG00000023232	-	95	83.616	ENSCGRG00001016732	Smarca4	99	78.446	Cricetulus_griseus_chok1gshd
ENSELUG00000023232	-	95	83.616	ENSCGRG00000017242	Smarca4	99	78.446	Cricetulus_griseus_crigri
ENSELUG00000023232	-	97	77.456	ENSCSEG00000014771	smarca4a	98	79.437	Cynoglossus_semilaevis
ENSELUG00000023232	-	99	76.785	ENSCVAG00000006979	smarca4a	100	77.895	Cyprinodon_variegatus
ENSELUG00000023232	-	94	79.492	ENSCVAG00000003018	-	98	80.038	Cyprinodon_variegatus
ENSELUG00000023232	-	98	78.213	ENSDARG00000077226	smarca4a	99	79.167	Danio_rerio
ENSELUG00000023232	-	90	78.480	ENSDARG00000104339	SMARCA4	91	83.760	Danio_rerio
ENSELUG00000023232	-	97	79.942	ENSDNOG00000048847	SMARCA4	90	84.507	Dasypus_novemcinctus
ENSELUG00000023232	-	82	81.760	ENSDORG00000002544	Smarca4	91	72.822	Dipodomys_ordii
ENSELUG00000023232	-	93	72.500	ENSETEG00000013361	SMARCA4	94	67.704	Echinops_telfairi
ENSELUG00000023232	-	99	79.467	ENSEASG00005006167	SMARCA4	99	80.727	Equus_asinus_asinus
ENSELUG00000023232	-	93	84.890	ENSECAG00000008334	SMARCA4	99	78.509	Equus_caballus
ENSELUG00000023232	-	93	85.605	ENSFCAG00000004894	SMARCA4	99	77.264	Felis_catus
ENSELUG00000023232	-	78	86.432	ENSFALG00000004208	SMARCA4	93	77.001	Ficedula_albicollis
ENSELUG00000023232	-	86	86.588	ENSFDAG00000012237	SMARCA4	97	78.176	Fukomys_damarensis
ENSELUG00000023232	-	95	84.801	ENSFHEG00000010182	smarca4a	99	77.435	Fundulus_heteroclitus
ENSELUG00000023232	-	94	85.021	ENSFHEG00000007902	-	98	82.150	Fundulus_heteroclitus
ENSELUG00000023232	-	86	79.124	ENSGMOG00000005756	-	80	78.093	Gadus_morhua
ENSELUG00000023232	-	90	81.311	ENSGMOG00000002649	smarca4a	80	86.120	Gadus_morhua
ENSELUG00000023232	-	66	84.967	ENSGALG00000047145	SMARCA4	100	74.513	Gallus_gallus
ENSELUG00000023232	-	94	83.333	ENSGAFG00000008827	-	98	83.377	Gambusia_affinis
ENSELUG00000023232	-	91	82.504	ENSGAFG00000014900	smarca4a	98	82.130	Gambusia_affinis
ENSELUG00000023232	-	96	77.815	ENSGACG00000006691	smarca4a	98	78.238	Gasterosteus_aculeatus
ENSELUG00000023232	-	98	74.293	ENSGACG00000016033	-	99	74.833	Gasterosteus_aculeatus
ENSELUG00000023232	-	98	77.955	ENSGAGG00000016757	SMARCA4	99	78.529	Gopherus_agassizii
ENSELUG00000023232	-	93	85.988	ENSGGOG00000009882	SMARCA4	99	77.472	Gorilla_gorilla
ENSELUG00000023232	-	98	85.311	ENSHBUG00000005447	-	98	83.011	Haplochromis_burtoni
ENSELUG00000023232	-	97	78.780	ENSHBUG00000021172	smarca4a	98	79.463	Haplochromis_burtoni
ENSELUG00000023232	-	98	77.290	ENSHGLG00000010519	SMARCA4	99	77.604	Heterocephalus_glaber_female
ENSELUG00000023232	-	98	77.473	ENSHGLG00100013774	SMARCA4	99	77.096	Heterocephalus_glaber_male
ENSELUG00000023232	-	94	79.426	ENSHCOG00000009510	smarca4a	95	80.856	Hippocampus_comes
ENSELUG00000023232	-	97	78.487	ENSIPUG00000006107	smarca4a	98	79.839	Ictalurus_punctatus
ENSELUG00000023232	-	98	80.328	ENSIPUG00000016346	-	96	81.664	Ictalurus_punctatus
ENSELUG00000023232	-	93	85.988	ENSSTOG00000007939	SMARCA4	99	78.697	Ictidomys_tridecemlineatus
ENSELUG00000023232	-	96	83.869	ENSJJAG00000012877	Smarca4	99	75.291	Jaculus_jaculus
ENSELUG00000023232	-	97	78.296	ENSKMAG00000011931	smarca4a	99	79.634	Kryptolebias_marmoratus
ENSELUG00000023232	-	98	84.037	ENSKMAG00000019518	-	98	82.993	Kryptolebias_marmoratus
ENSELUG00000023232	-	94	76.325	ENSLBEG00000017383	smarca4a	97	76.961	Labrus_bergylta
ENSELUG00000023232	-	94	83.856	ENSLBEG00000020655	-	98	83.568	Labrus_bergylta
ENSELUG00000023232	-	83	83.798	ENSLOCG00000007820	smarca4a	93	88.091	Lepisosteus_oculatus
ENSELUG00000023232	-	93	85.791	ENSLAFG00000001433	SMARCA4	99	78.386	Loxodonta_africana
ENSELUG00000023232	-	93	85.988	ENSMFAG00000032146	SMARCA4	98	77.472	Macaca_fascicularis
ENSELUG00000023232	-	93	85.988	ENSMMUG00000012042	SMARCA4	99	88.695	Macaca_mulatta
ENSELUG00000023232	-	98	78.397	ENSMNEG00000028512	SMARCA4	99	77.917	Macaca_nemestrina
ENSELUG00000023232	-	93	85.988	ENSMLEG00000034976	SMARCA4	99	77.327	Mandrillus_leucophaeus
ENSELUG00000023232	-	98	84.680	ENSMAMG00000002841	-	98	83.608	Mastacembelus_armatus
ENSELUG00000023232	-	96	83.792	ENSMAMG00000009256	smarca4a	99	81.158	Mastacembelus_armatus
ENSELUG00000023232	-	97	78.728	ENSMZEG00005003889	smarca4a	99	78.849	Maylandia_zebra
ENSELUG00000023232	-	94	85.978	ENSMZEG00005023861	-	95	82.787	Maylandia_zebra
ENSELUG00000023232	-	93	85.529	ENSMAUG00000020731	Smarca4	99	78.299	Mesocricetus_auratus
ENSELUG00000023232	-	93	85.867	ENSMICG00000009806	SMARCA4	99	77.264	Microcebus_murinus
ENSELUG00000023232	-	93	85.561	ENSMOCG00000022209	Smarca4	99	78.236	Microtus_ochrogaster
ENSELUG00000023232	-	95	83.845	ENSMMOG00000008466	-	98	83.246	Mola_mola
ENSELUG00000023232	-	94	81.418	ENSMMOG00000007571	smarca4a	97	78.918	Mola_mola
ENSELUG00000023232	-	93	83.982	ENSMODG00000006287	SMARCA4	99	76.355	Monodelphis_domestica
ENSELUG00000023232	-	79	86.957	ENSMALG00000021534	-	99	81.166	Monopterus_albus
ENSELUG00000023232	-	96	83.261	ENSMALG00000003388	smarca4a	99	79.200	Monopterus_albus
ENSELUG00000023232	-	93	85.835	MGP_CAROLIEiJ_G0031879	Smarca4	100	78.216	Mus_caroli
ENSELUG00000023232	-	93	85.835	ENSMUSG00000032187	Smarca4	99	78.383	Mus_musculus
ENSELUG00000023232	-	98	78.121	MGP_PahariEiJ_G0014745	Smarca4	100	78.588	Mus_pahari
ENSELUG00000023232	-	93	85.835	MGP_SPRETEiJ_G0033003	Smarca4	100	78.216	Mus_spretus
ENSELUG00000023232	-	93	85.911	ENSMPUG00000005711	SMARCA4	99	77.347	Mustela_putorius_furo
ENSELUG00000023232	-	93	86.064	ENSMLUG00000004491	-	99	78.195	Myotis_lucifugus
ENSELUG00000023232	-	98	78.125	ENSNGAG00000021852	Smarca4	99	77.701	Nannospalax_galili
ENSELUG00000023232	-	94	80.926	ENSNBRG00000011457	smarca4a	96	80.818	Neolamprologus_brichardi
ENSELUG00000023232	-	84	82.728	ENSNBRG00000018865	-	99	82.232	Neolamprologus_brichardi
ENSELUG00000023232	-	94	74.984	ENSNLEG00000012389	SMARCA4	94	74.919	Nomascus_leucogenys
ENSELUG00000023232	-	74	93.103	ENSOPRG00000000885	-	71	93.103	Ochotona_princeps
ENSELUG00000023232	-	96	78.951	ENSODEG00000017127	SMARCA4	92	79.071	Octodon_degus
ENSELUG00000023232	-	98	85.654	ENSONIG00000018040	-	96	82.341	Oreochromis_niloticus
ENSELUG00000023232	-	97	79.427	ENSONIG00000008196	smarca4a	99	79.057	Oreochromis_niloticus
ENSELUG00000023232	-	97	74.280	ENSOCUG00000001787	SMARCA4	98	73.755	Oryctolagus_cuniculus
ENSELUG00000023232	-	94	85.512	ENSORLG00000003955	-	99	80.850	Oryzias_latipes
ENSELUG00000023232	-	96	82.383	ENSORLG00000015452	smarca4a	99	79.056	Oryzias_latipes
ENSELUG00000023232	-	96	82.310	ENSORLG00020004611	smarca4a	99	80.072	Oryzias_latipes_hni
ENSELUG00000023232	-	94	85.452	ENSORLG00020009728	-	98	80.534	Oryzias_latipes_hni
ENSELUG00000023232	-	98	85.694	ENSORLG00015007739	-	93	81.945	Oryzias_latipes_hsok
ENSELUG00000023232	-	96	82.310	ENSORLG00015016560	smarca4a	99	79.056	Oryzias_latipes_hsok
ENSELUG00000023232	-	98	82.181	ENSOMEG00000007486	smarca4a	99	79.028	Oryzias_melastigma
ENSELUG00000023232	-	94	85.593	ENSOMEG00000016626	-	96	82.193	Oryzias_melastigma
ENSELUG00000023232	-	83	84.589	ENSOGAG00000016148	SMARCA4	100	76.141	Otolemur_garnettii
ENSELUG00000023232	-	96	78.314	ENSOARG00000017454	SMARCA4	97	78.165	Ovis_aries
ENSELUG00000023232	-	93	85.988	ENSPPAG00000043191	SMARCA4	99	77.472	Pan_paniscus
ENSELUG00000023232	-	93	85.605	ENSPPRG00000000064	SMARCA4	99	77.264	Panthera_pardus
ENSELUG00000023232	-	91	81.874	ENSPTIG00000017447	SMARCA4	99	74.374	Panthera_tigris_altaica
ENSELUG00000023232	-	93	85.988	ENSPTRG00000010488	SMARCA4	99	77.472	Pan_troglodytes
ENSELUG00000023232	-	98	78.460	ENSPANG00000011042	SMARCA4	98	77.980	Papio_anubis
ENSELUG00000023232	-	97	79.722	ENSPKIG00000007770	SMARCA4	98	80.878	Paramormyrops_kingsleyae
ENSELUG00000023232	-	93	80.264	ENSPKIG00000010087	-	97	79.244	Paramormyrops_kingsleyae
ENSELUG00000023232	-	98	75.307	ENSPSIG00000005547	SMARCA4	92	76.653	Pelodiscus_sinensis
ENSELUG00000023232	-	93	85.638	ENSPEMG00000020389	Smarca4	99	78.299	Peromyscus_maniculatus_bairdii
ENSELUG00000023232	-	93	86.043	ENSPCIG00000017138	SMARCA4	99	78.160	Phascolarctos_cinereus
ENSELUG00000023232	-	98	84.375	ENSPFOG00000007892	smarca4a	90	85.205	Poecilia_formosa
ENSELUG00000023232	-	92	87.027	ENSPFOG00000012930	-	95	81.563	Poecilia_formosa
ENSELUG00000023232	-	86	88.889	ENSPLAG00000018616	-	98	81.589	Poecilia_latipinna
ENSELUG00000023232	-	98	83.790	ENSPLAG00000014294	smarca4a	99	80.601	Poecilia_latipinna
ENSELUG00000023232	-	94	85.581	ENSPMEG00000003725	smarca4a	99	76.781	Poecilia_mexicana
ENSELUG00000023232	-	94	83.311	ENSPMEG00000008929	-	98	83.548	Poecilia_mexicana
ENSELUG00000023232	-	94	84.936	ENSPREG00000014608	smarca4a	99	77.498	Poecilia_reticulata
ENSELUG00000023232	-	94	83.024	ENSPREG00000014823	-	98	82.914	Poecilia_reticulata
ENSELUG00000023232	-	93	83.869	ENSPPYG00000009568	SMARCA4	99	75.414	Pongo_abelii
ENSELUG00000023232	-	72	81.457	ENSPCAG00000014054	SMARCA4	77	80.921	Procavia_capensis
ENSELUG00000023232	-	93	84.890	ENSPCOG00000023011	SMARCA4	99	77.202	Propithecus_coquereli
ENSELUG00000023232	-	91	90.535	ENSPVAG00000007787	SMARCA4	94	69.238	Pteropus_vampyrus
ENSELUG00000023232	-	90	84.303	ENSPNYG00000023995	-	98	84.626	Pundamilia_nyererei
ENSELUG00000023232	-	97	80.470	ENSPNYG00000000717	smarca4a	96	81.170	Pundamilia_nyererei
ENSELUG00000023232	-	94	80.573	ENSPNAG00000006636	-	97	81.358	Pygocentrus_nattereri
ENSELUG00000023232	-	93	85.835	ENSRNOG00000009271	Smarca4	99	78.446	Rattus_norvegicus
ENSELUG00000023232	-	93	85.988	ENSRBIG00000038696	SMARCA4	98	77.945	Rhinopithecus_bieti
ENSELUG00000023232	-	93	85.988	ENSRROG00000045509	SMARCA4	99	77.534	Rhinopithecus_roxellana
ENSELUG00000023232	-	94	85.974	ENSSBOG00000026896	SMARCA4	95	84.447	Saimiri_boliviensis_boliviensis
ENSELUG00000023232	-	93	84.943	ENSSHAG00000001642	SMARCA4	99	78.160	Sarcophilus_harrisii
ENSELUG00000023232	-	97	78.609	ENSSFOG00015013823	smarca4	98	80.349	Scleropages_formosus
ENSELUG00000023232	-	98	78.585	ENSSFOG00015009921	-	88	87.031	Scleropages_formosus
ENSELUG00000023232	-	96	84.815	ENSSMAG00000014082	-	96	79.721	Scophthalmus_maximus
ENSELUG00000023232	-	97	77.610	ENSSMAG00000003200	smarca4a	98	78.177	Scophthalmus_maximus
ENSELUG00000023232	-	94	76.128	ENSSDUG00000017298	smarca4a	99	75.614	Seriola_dumerili
ENSELUG00000023232	-	94	81.675	ENSSDUG00000005388	-	97	82.063	Seriola_dumerili
ENSELUG00000023232	-	90	81.707	ENSSLDG00000023663	-	97	82.908	Seriola_lalandi_dorsalis
ENSELUG00000023232	-	97	78.510	ENSSLDG00000024486	smarca4a	100	78.491	Seriola_lalandi_dorsalis
ENSELUG00000023232	-	65	92.547	ENSSARG00000013477	SMARCA4	80	92.547	Sorex_araneus
ENSELUG00000023232	-	94	74.582	ENSSPUG00000004558	SMARCA4	98	73.739	Sphenodon_punctatus
ENSELUG00000023232	-	97	80.354	ENSSPAG00000004248	smarca4a	99	79.564	Stegastes_partitus
ENSELUG00000023232	-	98	83.496	ENSSPAG00000012533	-	97	82.342	Stegastes_partitus
ENSELUG00000023232	-	93	86.096	ENSSSCG00000013629	SMARCA4	99	77.389	Sus_scrofa
ENSELUG00000023232	-	54	77.700	ENSTGUG00000015488	-	92	88.300	Taeniopygia_guttata
ENSELUG00000023232	-	94	81.869	ENSTRUG00000001378	SMARCA4	95	82.612	Takifugu_rubripes
ENSELUG00000023232	-	87	81.951	ENSTRUG00000004885	smarca4a	100	77.610	Takifugu_rubripes
ENSELUG00000023232	-	98	81.515	ENSTNIG00000004536	SMARCA4	99	78.150	Tetraodon_nigroviridis
ENSELUG00000023232	-	70	85.816	ENSTNIG00000004859	-	99	85.816	Tetraodon_nigroviridis
ENSELUG00000023232	-	98	75.047	ENSTTRG00000009519	SMARCA4	99	75.230	Tursiops_truncatus
ENSELUG00000023232	-	93	85.988	ENSUAMG00000014661	SMARCA4	99	77.409	Ursus_americanus
ENSELUG00000023232	-	95	86.850	ENSUMAG00000022005	SMARCA4	96	86.656	Ursus_maritimus
ENSELUG00000023232	-	93	85.988	ENSVVUG00000017820	SMARCA4	96	77.409	Vulpes_vulpes
ENSELUG00000023232	-	97	75.000	ENSXETG00000009355	smarca4	99	75.155	Xenopus_tropicalis
ENSELUG00000023232	-	94	83.479	ENSXCOG00000013494	-	98	83.409	Xiphophorus_couchianus
ENSELUG00000023232	-	94	85.149	ENSXMAG00000007030	-	98	84.049	Xiphophorus_maculatus
ENSELUG00000023232	-	94	84.738	ENSXMAG00000006321	smarca4a	100	79.689	Xiphophorus_maculatus