EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000023247 (Gene tree)
Gene ID: 105030390
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 11762 bases
Position: chrLG11:43765969-43777730
Accession: 105030390
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000042135	MMR_HSR1	PF01926.23	6.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000035932	-	2823	XM_010904237	ENSELUP00000042135	209 (aa)	XP_010902539	UPI000576ECFF
ENSELUT00000035916	-	630	-	ENSELUP00000024466	209 (aa)	-	-
ENSELUT00000043131	-	2849	-	ENSELUP00000024484	222 (aa)	-	-

Gene Model

Click here to download ENSELUG00000023247's gene model file

Pathways

Pathway ID	Pathway Name	Source
els04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000023247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000023247	si:dkey-16l2.16	79	32.544	ENSELUG00000017558	mras	79	32.544
ENSELUG00000023247	si:dkey-16l2.16	97	52.941	ENSELUG00000023815	-	99	52.941
ENSELUG00000023247	si:dkey-16l2.16	79	30.952	ENSELUG00000008604	rras2	83	30.952
ENSELUG00000023247	si:dkey-16l2.16	95	34.634	ENSELUG00000004378	rab9b	97	34.634
ENSELUG00000023247	si:dkey-16l2.16	99	36.019	ENSELUG00000008876	rab6a	99	36.019
ENSELUG00000023247	si:dkey-16l2.16	100	41.860	ENSELUG00000021148	rab11bb	99	41.860
ENSELUG00000023247	si:dkey-16l2.16	98	41.346	ENSELUG00000006604	rab25a	96	41.346
ENSELUG00000023247	si:dkey-16l2.16	100	35.377	ENSELUG00000023120	-	97	35.377
ENSELUG00000023247	si:dkey-16l2.16	81	36.932	ENSELUG00000016682	-	85	36.932
ENSELUG00000023247	si:dkey-16l2.16	88	56.216	ENSELUG00000012166	RAB1A	85	56.216
ENSELUG00000023247	si:dkey-16l2.16	94	33.495	ENSELUG00000022157	rab34a	78	33.495
ENSELUG00000023247	si:dkey-16l2.16	55	30.172	ENSELUG00000018031	arl3	59	30.172
ENSELUG00000023247	si:dkey-16l2.16	83	40.909	ENSELUG00000010345	rab42a	81	40.909
ENSELUG00000023247	si:dkey-16l2.16	80	34.302	ENSELUG00000003058	KRAS	90	34.302
ENSELUG00000023247	si:dkey-16l2.16	81	36.571	ENSELUG00000000175	zgc:100918	84	36.571
ENSELUG00000023247	si:dkey-16l2.16	100	41.860	ENSELUG00000000916	-	98	47.794
ENSELUG00000023247	si:dkey-16l2.16	81	45.455	ENSELUG00000013219	rab33a	72	45.455
ENSELUG00000023247	si:dkey-16l2.16	79	60.241	ENSELUG00000011680	zgc:171927	79	60.241
ENSELUG00000023247	si:dkey-16l2.16	64	33.577	ENSELUG00000004092	rab20	50	33.577
ENSELUG00000023247	si:dkey-16l2.16	83	48.276	ENSELUG00000005989	RAB15	81	48.276
ENSELUG00000023247	si:dkey-16l2.16	83	47.701	ENSELUG00000020012	rab15	82	47.701
ENSELUG00000023247	si:dkey-16l2.16	95	38.693	ENSELUG00000006462	rab5aa	89	38.693
ENSELUG00000023247	si:dkey-16l2.16	95	33.659	ENSELUG00000016622	rab9a	97	33.659
ENSELUG00000023247	si:dkey-16l2.16	97	42.029	ENSELUG00000002999	rab11a	88	50.394
ENSELUG00000023247	si:dkey-16l2.16	85	42.935	ENSELUG00000003805	rab18a	89	42.935
ENSELUG00000023247	si:dkey-16l2.16	85	42.541	ENSELUG00000013957	-	85	42.541
ENSELUG00000023247	si:dkey-16l2.16	97	40.865	ENSELUG00000012035	rab11al	96	40.865
ENSELUG00000023247	si:dkey-16l2.16	76	42.500	ENSELUG00000009832	rab14	74	42.500
ENSELUG00000023247	si:dkey-16l2.16	86	37.778	ENSELUG00000014785	rab4a	85	37.778
ENSELUG00000023247	si:dkey-16l2.16	84	47.159	ENSELUG00000022997	rab30	87	47.159
ENSELUG00000023247	si:dkey-16l2.16	99	52.657	ENSELUG00000012428	-	99	53.431
ENSELUG00000023247	si:dkey-16l2.16	100	41.860	ENSELUG00000020948	-	98	49.606
ENSELUG00000023247	si:dkey-16l2.16	76	47.170	ENSELUG00000023964	rab2a	75	47.170
ENSELUG00000023247	si:dkey-16l2.16	85	32.961	ENSELUG00000004712	HRAS	94	32.961
ENSELUG00000023247	si:dkey-16l2.16	88	36.788	ENSELUG00000018921	rab36	73	36.788
ENSELUG00000023247	si:dkey-16l2.16	73	33.117	ENSELUG00000016028	rhebl1	83	33.117
ENSELUG00000023247	si:dkey-16l2.16	97	54.412	ENSELUG00000015413	rab1ab	99	54.412
ENSELUG00000023247	si:dkey-16l2.16	78	35.119	ENSELUG00000006480	rheb	88	35.119
ENSELUG00000023247	si:dkey-16l2.16	99	41.232	ENSELUG00000012060	rab25b	98	41.232
ENSELUG00000023247	si:dkey-16l2.16	81	36.932	ENSELUG00000006539	RAB7A	85	36.932
ENSELUG00000023247	si:dkey-16l2.16	74	31.677	ENSELUG00000019264	dnajc27	59	31.677
ENSELUG00000023247	si:dkey-16l2.16	94	33.010	ENSELUG00000005597	rab34b	79	33.010
ENSELUG00000023247	si:dkey-16l2.16	79	41.566	ENSELUG00000013571	-	77	41.566
ENSELUG00000023247	si:dkey-16l2.16	95	38.693	ENSELUG00000013436	rab5ab	89	38.693
ENSELUG00000023247	si:dkey-16l2.16	95	37.688	ENSELUG00000018516	rab5c	90	39.196
ENSELUG00000023247	si:dkey-16l2.16	86	38.462	ENSELUG00000011352	-	81	38.462
ENSELUG00000023247	si:dkey-16l2.16	95	36.683	ENSELUG00000015343	rab22a	97	36.683
ENSELUG00000023247	si:dkey-16l2.16	95	38.785	ENSELUG00000002575	rab33ba	88	38.785
ENSELUG00000023247	si:dkey-16l2.16	81	41.520	ENSELUG00000007123	rab12	71	41.520
ENSELUG00000023247	si:dkey-16l2.16	78	31.928	ENSELUG00000018367	rheb	88	31.928
ENSELUG00000023247	si:dkey-16l2.16	79	33.136	ENSELUG00000005090	si:ch73-116o1.2	77	31.522
ENSELUG00000023247	si:dkey-16l2.16	78	48.171	ENSELUG00000016450	rab18b	80	48.171
ENSELUG00000023247	si:dkey-16l2.16	98	70.732	ENSELUG00000023972	rab35	99	70.732
ENSELUG00000023247	si:dkey-16l2.16	93	30.734	ENSELUG00000013206	rasl11a	83	30.734
ENSELUG00000023247	si:dkey-16l2.16	78	39.521	ENSELUG00000022470	rab6bb	80	39.521
ENSELUG00000023247	si:dkey-16l2.16	98	36.058	ENSELUG00000001257	rab6ba	98	36.058
ENSELUG00000023247	si:dkey-16l2.16	86	44.199	ENSELUG00000019240	-	93	44.199
ENSELUG00000023247	si:dkey-16l2.16	95	36.585	ENSELUG00000021199	RAB9A	90	36.585
ENSELUG00000023247	si:dkey-16l2.16	80	49.704	ENSELUG00000012801	rab13	85	49.704
ENSELUG00000023247	si:dkey-16l2.16	55	30.172	ENSELUG00000016864	arl5c	65	30.172
ENSELUG00000023247	si:dkey-16l2.16	74	34.615	ENSELUG00000020788	rab23	74	33.908
ENSELUG00000023247	si:dkey-16l2.16	56	30.000	ENSELUG00000022956	arl8	66	30.000
ENSELUG00000023247	si:dkey-16l2.16	85	43.094	ENSELUG00000005304	rab39ba	85	43.094
ENSELUG00000023247	si:dkey-16l2.16	78	34.302	ENSELUG00000013666	si:cabz01085950.1	83	34.302
ENSELUG00000023247	si:dkey-16l2.16	95	39.196	ENSELUG00000010439	-	89	39.196

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000023247	si:dkey-16l2.16	99	86.538	ENSAPOG00000008263	si:dkey-16l2.16	99	87.981	Acanthochromis_polyacanthus
ENSELUG00000023247	si:dkey-16l2.16	99	87.019	ENSAOCG00000016825	si:dkey-16l2.16	99	88.462	Amphiprion_ocellaris
ENSELUG00000023247	si:dkey-16l2.16	99	87.019	ENSAPEG00000006500	si:dkey-16l2.16	99	88.462	Amphiprion_percula
ENSELUG00000023247	si:dkey-16l2.16	99	86.538	ENSATEG00000019238	si:dkey-16l2.16	99	88.038	Anabas_testudineus
ENSELUG00000023247	si:dkey-16l2.16	99	86.538	ENSACLG00000018721	si:dkey-16l2.16	99	87.500	Astatotilapia_calliptera
ENSELUG00000023247	si:dkey-16l2.16	99	87.981	ENSAMXG00000038243	si:dkey-16l2.16	93	96.581	Astyanax_mexicanus
ENSELUG00000023247	si:dkey-16l2.16	56	94.872	ENSCSEG00000009988	si:dkey-16l2.16	89	94.872	Cynoglossus_semilaevis
ENSELUG00000023247	si:dkey-16l2.16	99	84.615	ENSCVAG00000003537	si:dkey-16l2.16	99	86.058	Cyprinodon_variegatus
ENSELUG00000023247	si:dkey-16l2.16	99	86.538	ENSDARG00000037967	si:dkey-16l2.16	98	95.726	Danio_rerio
ENSELUG00000023247	si:dkey-16l2.16	56	93.162	ENSFHEG00000000767	si:dkey-16l2.16	77	91.667	Fundulus_heteroclitus
ENSELUG00000023247	si:dkey-16l2.16	76	85.535	ENSGMOG00000015174	si:dkey-16l2.16	97	85.535	Gadus_morhua
ENSELUG00000023247	si:dkey-16l2.16	99	81.250	ENSGAFG00000005388	si:dkey-16l2.16	99	81.250	Gambusia_affinis
ENSELUG00000023247	si:dkey-16l2.16	98	85.024	ENSGACG00000014915	si:dkey-16l2.16	97	86.473	Gasterosteus_aculeatus
ENSELUG00000023247	si:dkey-16l2.16	99	87.019	ENSHBUG00000019261	si:dkey-16l2.16	99	87.981	Haplochromis_burtoni
ENSELUG00000023247	si:dkey-16l2.16	99	85.577	ENSHCOG00000006538	si:dkey-16l2.16	99	86.058	Hippocampus_comes
ENSELUG00000023247	si:dkey-16l2.16	99	82.212	ENSKMAG00000003494	si:dkey-16l2.16	99	83.654	Kryptolebias_marmoratus
ENSELUG00000023247	si:dkey-16l2.16	99	86.538	ENSLBEG00000007681	si:dkey-16l2.16	99	87.981	Labrus_bergylta
ENSELUG00000023247	si:dkey-16l2.16	99	87.560	ENSMAMG00000019230	si:dkey-16l2.16	99	87.560	Mastacembelus_armatus
ENSELUG00000023247	si:dkey-16l2.16	99	86.538	ENSMZEG00005002081	si:dkey-16l2.16	99	87.500	Maylandia_zebra
ENSELUG00000023247	si:dkey-16l2.16	99	86.792	ENSMMOG00000020140	si:dkey-16l2.16	99	87.264	Mola_mola
ENSELUG00000023247	si:dkey-16l2.16	99	84.135	ENSMALG00000014727	si:dkey-16l2.16	99	85.577	Monopterus_albus
ENSELUG00000023247	si:dkey-16l2.16	99	86.538	ENSNBRG00000008930	si:dkey-16l2.16	99	87.500	Neolamprologus_brichardi
ENSELUG00000023247	si:dkey-16l2.16	99	86.538	ENSONIG00000009443	si:dkey-16l2.16	99	87.500	Oreochromis_niloticus
ENSELUG00000023247	si:dkey-16l2.16	99	84.058	ENSORLG00000001098	si:dkey-16l2.16	99	84.058	Oryzias_latipes
ENSELUG00000023247	si:dkey-16l2.16	99	84.058	ENSORLG00020000867	si:dkey-16l2.16	99	84.058	Oryzias_latipes_hni
ENSELUG00000023247	si:dkey-16l2.16	99	83.575	ENSOMEG00000015474	si:dkey-16l2.16	99	85.024	Oryzias_melastigma
ENSELUG00000023247	si:dkey-16l2.16	98	87.379	ENSPKIG00000005686	-	99	87.864	Paramormyrops_kingsleyae
ENSELUG00000023247	si:dkey-16l2.16	98	79.327	ENSPKIG00000018888	si:dkey-16l2.16	99	79.327	Paramormyrops_kingsleyae
ENSELUG00000023247	si:dkey-16l2.16	99	86.058	ENSPMGG00000000751	si:dkey-16l2.16	99	86.538	Periophthalmus_magnuspinnatus
ENSELUG00000023247	si:dkey-16l2.16	99	82.212	ENSPFOG00000004746	si:dkey-16l2.16	99	82.212	Poecilia_formosa
ENSELUG00000023247	si:dkey-16l2.16	99	81.731	ENSPLAG00000021043	si:dkey-16l2.16	99	81.731	Poecilia_latipinna
ENSELUG00000023247	si:dkey-16l2.16	99	82.212	ENSPMEG00000007165	si:dkey-16l2.16	99	82.212	Poecilia_mexicana
ENSELUG00000023247	si:dkey-16l2.16	99	81.731	ENSPREG00000005323	si:dkey-16l2.16	99	81.731	Poecilia_reticulata
ENSELUG00000023247	si:dkey-16l2.16	99	87.019	ENSPNYG00000009490	si:dkey-16l2.16	99	87.981	Pundamilia_nyererei
ENSELUG00000023247	si:dkey-16l2.16	99	88.517	ENSPNAG00000018986	si:dkey-16l2.16	99	88.517	Pygocentrus_nattereri
ENSELUG00000023247	si:dkey-16l2.16	98	75.728	ENSSFOG00015006414	-	99	75.728	Scleropages_formosus
ENSELUG00000023247	si:dkey-16l2.16	99	88.462	ENSSFOG00015021448	-	99	88.462	Scleropages_formosus
ENSELUG00000023247	si:dkey-16l2.16	99	81.250	ENSSMAG00000011769	si:dkey-16l2.16	93	82.692	Scophthalmus_maximus
ENSELUG00000023247	si:dkey-16l2.16	99	85.577	ENSSDUG00000005719	si:dkey-16l2.16	99	87.019	Seriola_dumerili
ENSELUG00000023247	si:dkey-16l2.16	99	85.577	ENSSLDG00000003631	si:dkey-16l2.16	99	87.019	Seriola_lalandi_dorsalis
ENSELUG00000023247	si:dkey-16l2.16	99	87.019	ENSSPAG00000006302	si:dkey-16l2.16	99	88.462	Stegastes_partitus
ENSELUG00000023247	si:dkey-16l2.16	99	85.096	ENSTRUG00000025076	si:dkey-16l2.16	94	95.763	Takifugu_rubripes
ENSELUG00000023247	si:dkey-16l2.16	99	85.577	ENSTNIG00000011300	si:dkey-16l2.16	99	87.019	Tetraodon_nigroviridis
ENSELUG00000023247	si:dkey-16l2.16	99	81.731	ENSXMAG00000021767	si:dkey-16l2.16	99	81.731	Xiphophorus_maculatus