EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000023277 (Gene tree)
Gene ID: 105019902
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 6571 bases
Position: chrLG03:16846731-16853301
Accession: 105019902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000024411	efThoc1	PF11957.8	5.5e-142	1	1
ENSELUP00000024425	efThoc1	PF11957.8	4.8e-141	1	1
ENSELUP00000024390	efThoc1	PF11957.8	7.6e-141	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000035927	-	2905	-	ENSELUP00000024425	693 (aa)	-	-
ENSELUT00000035813	-	1977	-	ENSELUP00000024390	658 (aa)	-	-
ENSELUT00000035856	-	2797	XM_010886436	ENSELUP00000024411	657 (aa)	XP_010884738	UPI000577B74B

Gene Model

Click here to download ENSELUG00000023277's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03013	RNA transport	KEGG
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000023277's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000023277	thoc1	100	73.112	ENSG00000079134	THOC1	99	80.412	Homo_sapiens
ENSELUG00000023277	thoc1	100	72.810	ENSAMEG00000006645	THOC1	99	72.810	Ailuropoda_melanoleuca
ENSELUG00000023277	thoc1	94	85.552	ENSACIG00000019392	thoc1	95	85.552	Amphilophus_citrinellus
ENSELUG00000023277	thoc1	100	82.801	ENSAOCG00000008391	thoc1	100	82.801	Amphiprion_ocellaris
ENSELUG00000023277	thoc1	100	88.280	ENSAPEG00000001093	thoc1	100	88.280	Amphiprion_percula
ENSELUG00000023277	thoc1	99	88.110	ENSATEG00000004783	thoc1	100	87.976	Anabas_testudineus
ENSELUG00000023277	thoc1	97	74.688	ENSAPLG00000016149	THOC1	96	74.688	Anas_platyrhynchos
ENSELUG00000023277	thoc1	99	73.740	ENSACAG00000008307	THOC1	96	73.740	Anolis_carolinensis
ENSELUG00000023277	thoc1	100	72.197	ENSANAG00000033200	THOC1	99	72.197	Aotus_nancymaae
ENSELUG00000023277	thoc1	100	86.910	ENSACLG00000016836	thoc1	100	86.910	Astatotilapia_calliptera
ENSELUG00000023277	thoc1	94	78.730	ENSAMXG00000014708	thoc1	98	78.730	Astyanax_mexicanus
ENSELUG00000023277	thoc1	100	73.112	ENSBTAG00000019215	THOC1	99	73.112	Bos_taurus
ENSELUG00000023277	thoc1	70	32.727	WBGene00020172	thoc-1	90	31.179	Caenorhabditis_elegans
ENSELUG00000023277	thoc1	100	72.961	ENSCJAG00000020450	THOC1	99	72.961	Callithrix_jacchus
ENSELUG00000023277	thoc1	100	72.961	ENSCAFG00000018324	THOC1	99	72.961	Canis_familiaris
ENSELUG00000023277	thoc1	100	72.961	ENSCAFG00020017894	THOC1	99	72.961	Canis_lupus_dingo
ENSELUG00000023277	thoc1	100	73.112	ENSCHIG00000015399	THOC1	99	74.028	Capra_hircus
ENSELUG00000023277	thoc1	100	72.810	ENSTSYG00000010585	THOC1	99	72.810	Carlito_syrichta
ENSELUG00000023277	thoc1	97	52.923	ENSCAPG00000016270	THOC1	98	52.923	Cavia_aperea
ENSELUG00000023277	thoc1	99	72.256	ENSCPOG00000000959	THOC1	99	72.256	Cavia_porcellus
ENSELUG00000023277	thoc1	100	72.961	ENSCCAG00000025766	THOC1	99	72.961	Cebus_capucinus
ENSELUG00000023277	thoc1	100	71.299	ENSCATG00000028180	THOC1	96	77.586	Cercocebus_atys
ENSELUG00000023277	thoc1	97	73.250	ENSCLAG00000009117	THOC1	99	73.250	Chinchilla_lanigera
ENSELUG00000023277	thoc1	100	73.112	ENSCSAG00000017631	THOC1	99	73.112	Chlorocebus_sabaeus
ENSELUG00000023277	thoc1	78	78.059	ENSCHOG00000010609	THOC1	77	78.059	Choloepus_hoffmanni
ENSELUG00000023277	thoc1	99	74.656	ENSCPBG00000027558	THOC1	99	74.656	Chrysemys_picta_bellii
ENSELUG00000023277	thoc1	74	48.089	ENSCING00000007663	-	99	48.089	Ciona_intestinalis
ENSELUG00000023277	thoc1	94	48.509	ENSCSAVG00000010649	-	100	48.509	Ciona_savignyi
ENSELUG00000023277	thoc1	100	72.769	ENSCANG00000034265	THOC1	96	77.616	Colobus_angolensis_palliatus
ENSELUG00000023277	thoc1	99	73.780	ENSCGRG00001016464	Thoc1	99	73.780	Cricetulus_griseus_chok1gshd
ENSELUG00000023277	thoc1	97	74.725	ENSCGRG00000010269	-	99	74.725	Cricetulus_griseus_crigri
ENSELUG00000023277	thoc1	90	60.237	ENSCGRG00000003390	-	97	60.714	Cricetulus_griseus_crigri
ENSELUG00000023277	thoc1	99	84.418	ENSCSEG00000012486	thoc1	99	86.058	Cynoglossus_semilaevis
ENSELUG00000023277	thoc1	100	85.084	ENSCVAG00000020600	thoc1	100	85.084	Cyprinodon_variegatus
ENSELUG00000023277	thoc1	100	83.714	ENSDARG00000088246	thoc1	100	83.714	Danio_rerio
ENSELUG00000023277	thoc1	100	72.769	ENSDNOG00000019217	THOC1	99	72.769	Dasypus_novemcinctus
ENSELUG00000023277	thoc1	97	69.702	ENSDORG00000008060	Thoc1	98	69.702	Dipodomys_ordii
ENSELUG00000023277	thoc1	95	36.257	FBgn0037382	Hpr1	92	37.206	Drosophila_melanogaster
ENSELUG00000023277	thoc1	90	55.853	ENSETEG00000004165	THOC1	99	55.853	Echinops_telfairi
ENSELUG00000023277	thoc1	91	63.123	ENSEBUG00000005998	thoc1	97	64.618	Eptatretus_burgeri
ENSELUG00000023277	thoc1	100	72.961	ENSEASG00005002549	THOC1	95	72.961	Equus_asinus_asinus
ENSELUG00000023277	thoc1	100	73.112	ENSECAG00000009267	THOC1	89	73.112	Equus_caballus
ENSELUG00000023277	thoc1	79	58.763	ENSEEUG00000012214	-	81	58.763	Erinaceus_europaeus
ENSELUG00000023277	thoc1	100	73.112	ENSFCAG00000022454	THOC1	87	73.112	Felis_catus
ENSELUG00000023277	thoc1	97	74.531	ENSFALG00000006205	THOC1	98	74.531	Ficedula_albicollis
ENSELUG00000023277	thoc1	98	72.811	ENSFDAG00000006842	THOC1	99	72.811	Fukomys_damarensis
ENSELUG00000023277	thoc1	100	85.388	ENSFHEG00000008841	thoc1	100	85.388	Fundulus_heteroclitus
ENSELUG00000023277	thoc1	99	86.769	ENSGMOG00000011486	thoc1	99	86.769	Gadus_morhua
ENSELUG00000023277	thoc1	99	74.046	ENSGALG00000014915	THOC1	99	73.152	Gallus_gallus
ENSELUG00000023277	thoc1	100	84.475	ENSGAFG00000021464	thoc1	99	85.601	Gambusia_affinis
ENSELUG00000023277	thoc1	99	87.443	ENSGACG00000017361	thoc1	99	87.443	Gasterosteus_aculeatus
ENSELUG00000023277	thoc1	99	74.695	ENSGAGG00000021230	-	97	74.695	Gopherus_agassizii
ENSELUG00000023277	thoc1	100	73.112	ENSGGOG00000003013	THOC1	99	73.112	Gorilla_gorilla
ENSELUG00000023277	thoc1	100	87.215	ENSHBUG00000009096	thoc1	100	87.215	Haplochromis_burtoni
ENSELUG00000023277	thoc1	70	68.000	ENSHGLG00000009264	-	99	68.000	Heterocephalus_glaber_female
ENSELUG00000023277	thoc1	99	72.755	ENSHGLG00000003712	-	99	72.755	Heterocephalus_glaber_female
ENSELUG00000023277	thoc1	99	72.603	ENSHGLG00100003570	THOC1	99	72.603	Heterocephalus_glaber_male
ENSELUG00000023277	thoc1	69	66.667	ENSHGLG00100002225	-	97	69.048	Heterocephalus_glaber_male
ENSELUG00000023277	thoc1	50	73.410	ENSHCOG00000017981	thoc1	98	82.258	Hippocampus_comes
ENSELUG00000023277	thoc1	98	72.685	ENSIPUG00000005306	thoc1	99	72.685	Ictalurus_punctatus
ENSELUG00000023277	thoc1	100	72.659	ENSSTOG00000006484	THOC1	99	72.659	Ictidomys_tridecemlineatus
ENSELUG00000023277	thoc1	53	72.805	ENSJJAG00000014893	-	96	73.699	Jaculus_jaculus
ENSELUG00000023277	thoc1	100	85.236	ENSKMAG00000003904	thoc1	100	85.236	Kryptolebias_marmoratus
ENSELUG00000023277	thoc1	100	86.301	ENSLBEG00000020372	thoc1	98	86.301	Labrus_bergylta
ENSELUG00000023277	thoc1	99	73.740	ENSLACG00000014869	THOC1	99	73.740	Latimeria_chalumnae
ENSELUG00000023277	thoc1	100	84.394	ENSLOCG00000002097	thoc1	99	84.394	Lepisosteus_oculatus
ENSELUG00000023277	thoc1	100	72.961	ENSLAFG00000009585	THOC1	99	72.961	Loxodonta_africana
ENSELUG00000023277	thoc1	100	73.112	ENSMFAG00000041520	THOC1	99	73.112	Macaca_fascicularis
ENSELUG00000023277	thoc1	100	73.112	ENSMMUG00000004662	THOC1	99	73.112	Macaca_mulatta
ENSELUG00000023277	thoc1	100	73.112	ENSMNEG00000040177	THOC1	99	73.112	Macaca_nemestrina
ENSELUG00000023277	thoc1	100	73.112	ENSMLEG00000034201	THOC1	99	73.112	Mandrillus_leucophaeus
ENSELUG00000023277	thoc1	96	86.645	ENSMAMG00000016747	thoc1	100	86.645	Mastacembelus_armatus
ENSELUG00000023277	thoc1	100	86.910	ENSMZEG00005024609	thoc1	100	86.910	Maylandia_zebra
ENSELUG00000023277	thoc1	97	74.375	ENSMGAG00000009811	THOC1	99	74.375	Meleagris_gallopavo
ENSELUG00000023277	thoc1	99	73.323	ENSMAUG00000010272	Thoc1	99	73.323	Mesocricetus_auratus
ENSELUG00000023277	thoc1	100	73.112	ENSMICG00000027200	THOC1	99	73.112	Microcebus_murinus
ENSELUG00000023277	thoc1	99	72.104	ENSMOCG00000014536	-	85	72.104	Microtus_ochrogaster
ENSELUG00000023277	thoc1	99	63.470	ENSMOCG00000014924	-	95	63.470	Microtus_ochrogaster
ENSELUG00000023277	thoc1	93	86.645	ENSMMOG00000011772	thoc1	100	86.645	Mola_mola
ENSELUG00000023277	thoc1	99	72.961	ENSMODG00000021482	THOC1	99	72.961	Monodelphis_domestica
ENSELUG00000023277	thoc1	99	87.043	ENSMALG00000021872	thoc1	99	87.043	Monopterus_albus
ENSELUG00000023277	thoc1	99	73.018	MGP_CAROLIEiJ_G0021989	Thoc1	99	73.018	Mus_caroli
ENSELUG00000023277	thoc1	99	72.866	ENSMUSG00000024287	Thoc1	98	81.818	Mus_musculus
ENSELUG00000023277	thoc1	99	72.866	MGP_PahariEiJ_G0018726	Thoc1	99	72.866	Mus_pahari
ENSELUG00000023277	thoc1	99	72.866	MGP_SPRETEiJ_G0022905	Thoc1	99	72.866	Mus_spretus
ENSELUG00000023277	thoc1	100	72.810	ENSMPUG00000005448	THOC1	99	72.810	Mustela_putorius_furo
ENSELUG00000023277	thoc1	100	72.054	ENSMLUG00000004090	-	99	72.054	Myotis_lucifugus
ENSELUG00000023277	thoc1	90	66.555	ENSMLUG00000027965	-	99	67.446	Myotis_lucifugus
ENSELUG00000023277	thoc1	61	66.085	ENSMLUG00000024912	-	100	66.085	Myotis_lucifugus
ENSELUG00000023277	thoc1	97	58.009	ENSNGAG00000008061	-	97	58.009	Nannospalax_galili
ENSELUG00000023277	thoc1	100	73.112	ENSNGAG00000001401	-	99	73.112	Nannospalax_galili
ENSELUG00000023277	thoc1	97	85.312	ENSNBRG00000005991	thoc1	97	85.312	Neolamprologus_brichardi
ENSELUG00000023277	thoc1	100	73.112	ENSNLEG00000006835	THOC1	99	73.112	Nomascus_leucogenys
ENSELUG00000023277	thoc1	89	77.186	ENSMEUG00000009756	THOC1	91	77.186	Notamacropus_eugenii
ENSELUG00000023277	thoc1	100	59.215	ENSOPRG00000001108	THOC1	99	59.215	Ochotona_princeps
ENSELUG00000023277	thoc1	99	67.378	ENSODEG00000006623	THOC1	99	67.378	Octodon_degus
ENSELUG00000023277	thoc1	100	87.215	ENSONIG00000009440	thoc1	99	87.215	Oreochromis_niloticus
ENSELUG00000023277	thoc1	100	72.961	ENSOCUG00000011601	THOC1	99	72.961	Oryctolagus_cuniculus
ENSELUG00000023277	thoc1	100	86.149	ENSORLG00000017629	thoc1	100	86.149	Oryzias_latipes
ENSELUG00000023277	thoc1	100	85.997	ENSORLG00020007567	thoc1	100	85.997	Oryzias_latipes_hni
ENSELUG00000023277	thoc1	100	85.997	ENSORLG00015007356	thoc1	100	85.997	Oryzias_latipes_hsok
ENSELUG00000023277	thoc1	100	83.714	ENSOMEG00000008200	thoc1	100	85.236	Oryzias_melastigma
ENSELUG00000023277	thoc1	100	69.743	ENSOGAG00000000470	THOC1	99	69.743	Otolemur_garnettii
ENSELUG00000023277	thoc1	98	73.538	ENSOARG00000009238	THOC1	97	73.538	Ovis_aries
ENSELUG00000023277	thoc1	100	73.112	ENSPPAG00000031812	THOC1	99	73.112	Pan_paniscus
ENSELUG00000023277	thoc1	100	72.659	ENSPPRG00000023794	THOC1	96	77.586	Panthera_pardus
ENSELUG00000023277	thoc1	100	72.659	ENSPTIG00000007469	THOC1	96	77.586	Panthera_tigris_altaica
ENSELUG00000023277	thoc1	100	72.197	ENSPTRG00000009816	THOC1	99	72.197	Pan_troglodytes
ENSELUG00000023277	thoc1	100	72.372	ENSPANG00000008665	THOC1	99	72.372	Papio_anubis
ENSELUG00000023277	thoc1	100	86.170	ENSPKIG00000005906	thoc1	100	86.930	Paramormyrops_kingsleyae
ENSELUG00000023277	thoc1	81	76.404	ENSPSIG00000007691	THOC1	97	76.404	Pelodiscus_sinensis
ENSELUG00000023277	thoc1	94	83.199	ENSPMGG00000008279	thoc1	95	83.199	Periophthalmus_magnuspinnatus
ENSELUG00000023277	thoc1	99	73.018	ENSPEMG00000021789	Thoc1	99	73.018	Peromyscus_maniculatus_bairdii
ENSELUG00000023277	thoc1	74	73.320	ENSPCIG00000026942	THOC1	97	73.320	Phascolarctos_cinereus
ENSELUG00000023277	thoc1	99	83.994	ENSPFOG00000011673	thoc1	100	83.866	Poecilia_formosa
ENSELUG00000023277	thoc1	100	84.018	ENSPLAG00000019648	thoc1	100	84.018	Poecilia_latipinna
ENSELUG00000023277	thoc1	99	84.146	ENSPMEG00000007083	thoc1	100	84.018	Poecilia_mexicana
ENSELUG00000023277	thoc1	100	83.866	ENSPREG00000006719	thoc1	100	83.866	Poecilia_reticulata
ENSELUG00000023277	thoc1	75	75.967	ENSPPYG00000009049	-	99	75.967	Pongo_abelii
ENSELUG00000023277	thoc1	100	64.072	ENSPCAG00000005320	THOC1	99	64.072	Procavia_capensis
ENSELUG00000023277	thoc1	100	72.508	ENSPCOG00000009234	THOC1	99	72.508	Propithecus_coquereli
ENSELUG00000023277	thoc1	100	71.601	ENSPVAG00000004007	THOC1	99	71.601	Pteropus_vampyrus
ENSELUG00000023277	thoc1	100	87.215	ENSPNYG00000019152	thoc1	100	87.215	Pundamilia_nyererei
ENSELUG00000023277	thoc1	100	84.475	ENSPNAG00000023390	thoc1	100	84.475	Pygocentrus_nattereri
ENSELUG00000023277	thoc1	67	81.379	ENSRNOG00000015332	Thoc1	89	81.379	Rattus_norvegicus
ENSELUG00000023277	thoc1	100	72.347	ENSRBIG00000033738	THOC1	99	75.086	Rhinopithecus_bieti
ENSELUG00000023277	thoc1	100	73.112	ENSRROG00000044988	THOC1	96	77.616	Rhinopithecus_roxellana
ENSELUG00000023277	thoc1	100	72.659	ENSSBOG00000016556	THOC1	99	72.659	Saimiri_boliviensis_boliviensis
ENSELUG00000023277	thoc1	99	73.933	ENSSHAG00000014829	THOC1	99	73.933	Sarcophilus_harrisii
ENSELUG00000023277	thoc1	100	88.432	ENSSFOG00015021527	thoc1	100	88.432	Scleropages_formosus
ENSELUG00000023277	thoc1	100	85.000	ENSSMAG00000018465	thoc1	99	85.000	Scophthalmus_maximus
ENSELUG00000023277	thoc1	99	89.024	ENSSDUG00000016810	thoc1	100	88.889	Seriola_dumerili
ENSELUG00000023277	thoc1	99	88.720	ENSSLDG00000015555	thoc1	100	88.584	Seriola_lalandi_dorsalis
ENSELUG00000023277	thoc1	88	72.348	ENSSARG00000006910	THOC1	88	72.348	Sorex_araneus
ENSELUG00000023277	thoc1	98	73.344	ENSSPUG00000007238	THOC1	99	72.907	Sphenodon_punctatus
ENSELUG00000023277	thoc1	99	83.131	ENSSPAG00000018847	thoc1	99	83.005	Stegastes_partitus
ENSELUG00000023277	thoc1	100	73.112	ENSSSCG00000025653	THOC1	94	73.112	Sus_scrofa
ENSELUG00000023277	thoc1	99	74.351	ENSTGUG00000010204	THOC1	99	74.351	Taeniopygia_guttata
ENSELUG00000023277	thoc1	99	86.280	ENSTRUG00000013518	thoc1	99	86.280	Takifugu_rubripes
ENSELUG00000023277	thoc1	99	86.433	ENSTNIG00000008473	thoc1	99	86.433	Tetraodon_nigroviridis
ENSELUG00000023277	thoc1	100	65.861	ENSTBEG00000016920	THOC1	99	65.861	Tupaia_belangeri
ENSELUG00000023277	thoc1	100	67.523	ENSTTRG00000016664	THOC1	99	67.523	Tursiops_truncatus
ENSELUG00000023277	thoc1	100	72.961	ENSUAMG00000002527	THOC1	99	73.529	Ursus_americanus
ENSELUG00000023277	thoc1	100	72.961	ENSUMAG00000019693	THOC1	99	72.961	Ursus_maritimus
ENSELUG00000023277	thoc1	68	68.159	ENSVPAG00000003726	-	67	68.500	Vicugna_pacos
ENSELUG00000023277	thoc1	100	72.961	ENSVVUG00000004384	THOC1	99	72.961	Vulpes_vulpes
ENSELUG00000023277	thoc1	99	70.061	ENSXETG00000003155	thoc1	96	70.061	Xenopus_tropicalis
ENSELUG00000023277	thoc1	94	79.870	ENSXCOG00000016085	thoc1	89	79.870	Xiphophorus_couchianus
ENSELUG00000023277	thoc1	100	83.866	ENSXMAG00000002353	thoc1	100	83.866	Xiphophorus_maculatus