EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000023287 (Gene tree)
Gene ID: 105027791
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 21784 bases
Position: chrLG11:8314057-8335840
Accession: 105027791
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000024473	RRM_1	PF00076.22	1.3e-28	1	2
ENSELUP00000024473	RRM_1	PF00076.22	1.3e-28	2	2
ENSELUP00000024479	RRM_1	PF00076.22	1.5e-28	1	2
ENSELUP00000024479	RRM_1	PF00076.22	1.5e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000043134	-	4571	XM_010900068	ENSELUP00000024479	746 (aa)	XP_010898370	UPI000577C3EF
ENSELUT00000035920	-	4499	XM_010900069	ENSELUP00000024473	722 (aa)	XP_010898371	UPI000577EDA1

Gene Model

Click here to download ENSELUG00000023287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000023287's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000023287	raver1	51	49.077	ENSELUG00000022384	raver2	85	62.896

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000023287	raver1	93	51.604	ENSG00000161847	RAVER1	98	51.226	Homo_sapiens
ENSELUG00000023287	raver1	98	75.939	ENSAPOG00000017267	raver1	90	76.495	Acanthochromis_polyacanthus
ENSELUG00000023287	raver1	94	50.676	ENSAMEG00000011738	RAVER1	96	49.932	Ailuropoda_melanoleuca
ENSELUG00000023287	raver1	98	76.078	ENSAOCG00000005128	raver1	95	77.019	Amphiprion_ocellaris
ENSELUG00000023287	raver1	98	76.243	ENSAPEG00000010854	raver1	98	77.178	Amphiprion_percula
ENSELUG00000023287	raver1	100	75.341	ENSATEG00000021004	raver1	100	75.341	Anabas_testudineus
ENSELUG00000023287	raver1	80	49.919	ENSACAG00000008386	-	91	49.841	Anolis_carolinensis
ENSELUG00000023287	raver1	68	60.511	ENSANAG00000028226	RAVER1	96	51.565	Aotus_nancymaae
ENSELUG00000023287	raver1	100	73.197	ENSACLG00000018492	raver1	95	74.457	Astatotilapia_calliptera
ENSELUG00000023287	raver1	98	67.639	ENSAMXG00000005132	raver1	99	67.150	Astyanax_mexicanus
ENSELUG00000023287	raver1	77	70.350	ENSBTAG00000015721	RAVER1	92	70.141	Bos_taurus
ENSELUG00000023287	raver1	93	52.459	ENSCJAG00000005671	RAVER1	96	51.701	Callithrix_jacchus
ENSELUG00000023287	raver1	93	52.335	ENSCAFG00000017861	RAVER1	95	52.817	Canis_familiaris
ENSELUG00000023287	raver1	93	52.335	ENSCAFG00020024449	RAVER1	97	52.817	Canis_lupus_dingo
ENSELUG00000023287	raver1	67	59.921	ENSCHIG00000006718	RAVER1	97	51.667	Capra_hircus
ENSELUG00000023287	raver1	86	52.430	ENSCAPG00000002269	RAVER1	100	51.714	Cavia_aperea
ENSELUG00000023287	raver1	91	52.654	ENSCPOG00000001008	RAVER1	97	51.444	Cavia_porcellus
ENSELUG00000023287	raver1	93	52.394	ENSCCAG00000031723	RAVER1	96	51.560	Cebus_capucinus
ENSELUG00000023287	raver1	93	52.120	ENSCATG00000043863	RAVER1	96	51.220	Cercocebus_atys
ENSELUG00000023287	raver1	91	53.343	ENSCLAG00000009336	RAVER1	97	51.719	Chinchilla_lanigera
ENSELUG00000023287	raver1	93	52.044	ENSCSAG00000007317	RAVER1	82	51.282	Chlorocebus_sabaeus
ENSELUG00000023287	raver1	92	53.026	ENSCPBG00000005349	-	97	52.701	Chrysemys_picta_bellii
ENSELUG00000023287	raver1	93	52.660	ENSCANG00000008337	RAVER1	96	51.220	Colobus_angolensis_palliatus
ENSELUG00000023287	raver1	91	52.156	ENSCGRG00001013260	-	98	51.355	Cricetulus_griseus_chok1gshd
ENSELUG00000023287	raver1	91	52.156	ENSCGRG00000015138	-	98	51.355	Cricetulus_griseus_crigri
ENSELUG00000023287	raver1	98	66.621	ENSCSEG00000021092	raver1	98	67.950	Cynoglossus_semilaevis
ENSELUG00000023287	raver1	100	71.875	ENSCVAG00000013971	raver1	98	72.199	Cyprinodon_variegatus
ENSELUG00000023287	raver1	98	70.556	ENSDARG00000052617	raver1	98	69.167	Danio_rerio
ENSELUG00000023287	raver1	55	64.013	ENSDNOG00000035742	-	57	61.471	Dasypus_novemcinctus
ENSELUG00000023287	raver1	92	47.561	ENSDORG00000010106	-	97	48.493	Dipodomys_ordii
ENSELUG00000023287	raver1	50	53.425	ENSETEG00000008201	-	66	50.685	Echinops_telfairi
ENSELUG00000023287	raver1	55	67.337	ENSEASG00005010544	-	65	68.871	Equus_asinus_asinus
ENSELUG00000023287	raver1	94	51.084	ENSECAG00000024966	RAVER1	96	50.813	Equus_caballus
ENSELUG00000023287	raver1	94	51.081	ENSFCAG00000009435	RAVER1	96	50.880	Felis_catus
ENSELUG00000023287	raver1	91	52.493	ENSFDAG00000015113	RAVER1	97	51.436	Fukomys_damarensis
ENSELUG00000023287	raver1	94	67.590	ENSGMOG00000003649	raver1	100	66.898	Gadus_morhua
ENSELUG00000023287	raver1	66	41.513	ENSGALG00000050608	-	53	40.239	Gallus_gallus
ENSELUG00000023287	raver1	100	71.274	ENSGAFG00000015944	raver1	98	71.586	Gambusia_affinis
ENSELUG00000023287	raver1	93	67.036	ENSGACG00000013818	raver1	99	67.729	Gasterosteus_aculeatus
ENSELUG00000023287	raver1	89	60.586	ENSGAGG00000011748	-	93	67.536	Gopherus_agassizii
ENSELUG00000023287	raver1	93	51.738	ENSGGOG00000006015	RAVER1	96	51.429	Gorilla_gorilla
ENSELUG00000023287	raver1	99	73.014	ENSHBUG00000021210	raver1	100	69.126	Haplochromis_burtoni
ENSELUG00000023287	raver1	91	52.295	ENSHGLG00000015460	RAVER1	97	51.852	Heterocephalus_glaber_female
ENSELUG00000023287	raver1	91	52.295	ENSHGLG00100000812	RAVER1	97	51.852	Heterocephalus_glaber_male
ENSELUG00000023287	raver1	100	68.587	ENSHCOG00000000449	raver1	96	69.306	Hippocampus_comes
ENSELUG00000023287	raver1	98	69.541	ENSIPUG00000013153	raver1	98	68.985	Ictalurus_punctatus
ENSELUG00000023287	raver1	93	52.044	ENSSTOG00000003241	RAVER1	98	52.710	Ictidomys_tridecemlineatus
ENSELUG00000023287	raver1	93	52.233	ENSJJAG00000018219	-	98	52.853	Jaculus_jaculus
ENSELUG00000023287	raver1	100	72.493	ENSKMAG00000017355	raver1	97	73.780	Kryptolebias_marmoratus
ENSELUG00000023287	raver1	93	74.963	ENSLBEG00000008268	raver1	94	74.963	Labrus_bergylta
ENSELUG00000023287	raver1	85	50.653	ENSLACG00000005809	-	99	50.943	Latimeria_chalumnae
ENSELUG00000023287	raver1	98	62.029	ENSLOCG00000007500	raver1	98	62.419	Lepisosteus_oculatus
ENSELUG00000023287	raver1	75	82.000	ENSLAFG00000003664	-	91	82.000	Loxodonta_africana
ENSELUG00000023287	raver1	93	51.459	ENSMFAG00000037977	RAVER1	96	51.147	Macaca_fascicularis
ENSELUG00000023287	raver1	93	52.044	ENSMMUG00000014897	RAVER1	96	51.147	Macaca_mulatta
ENSELUG00000023287	raver1	93	52.044	ENSMNEG00000028390	RAVER1	96	51.147	Macaca_nemestrina
ENSELUG00000023287	raver1	93	52.257	ENSMLEG00000041959	RAVER1	96	51.355	Mandrillus_leucophaeus
ENSELUG00000023287	raver1	100	73.913	ENSMAMG00000012059	raver1	98	74.586	Mastacembelus_armatus
ENSELUG00000023287	raver1	100	73.469	ENSMZEG00005019002	raver1	100	74.457	Maylandia_zebra
ENSELUG00000023287	raver1	91	52.083	ENSMAUG00000017948	-	98	52.227	Mesocricetus_auratus
ENSELUG00000023287	raver1	93	52.851	ENSMICG00000010326	RAVER1	98	53.648	Microcebus_murinus
ENSELUG00000023287	raver1	79	60.000	ENSMOCG00000015553	-	98	51.160	Microtus_ochrogaster
ENSELUG00000023287	raver1	100	75.307	ENSMMOG00000012093	raver1	100	75.307	Mola_mola
ENSELUG00000023287	raver1	89	51.613	ENSMODG00000005584	-	87	52.339	Monodelphis_domestica
ENSELUG00000023287	raver1	100	73.370	ENSMALG00000016569	raver1	99	73.379	Monopterus_albus
ENSELUG00000023287	raver1	93	51.286	MGP_CAROLIEiJ_G0031860	-	98	51.409	Mus_caroli
ENSELUG00000023287	raver1	92	51.425	ENSMUSG00000010205	Raver1	98	50.870	Mus_musculus
ENSELUG00000023287	raver1	92	49.531	MGP_PahariEiJ_G0014726	-	98	51.044	Mus_pahari
ENSELUG00000023287	raver1	92	51.289	MGP_SPRETEiJ_G0032984	-	98	50.736	Mus_spretus
ENSELUG00000023287	raver1	91	53.343	ENSMPUG00000006712	RAVER1	96	51.556	Mustela_putorius_furo
ENSELUG00000023287	raver1	92	52.017	ENSMLUG00000012328	RAVER1	97	52.758	Myotis_lucifugus
ENSELUG00000023287	raver1	79	58.947	ENSNGAG00000001260	-	98	49.728	Nannospalax_galili
ENSELUG00000023287	raver1	100	66.259	ENSNBRG00000010139	raver1	100	66.984	Neolamprologus_brichardi
ENSELUG00000023287	raver1	92	51.539	ENSNLEG00000012181	RAVER1	95	51.160	Nomascus_leucogenys
ENSELUG00000023287	raver1	85	52.161	ENSMEUG00000003281	-	100	51.045	Notamacropus_eugenii
ENSELUG00000023287	raver1	91	52.684	ENSODEG00000016260	RAVER1	97	52.078	Octodon_degus
ENSELUG00000023287	raver1	92	72.018	ENSONIG00000001559	raver1	100	72.035	Oreochromis_niloticus
ENSELUG00000023287	raver1	93	50.813	ENSOCUG00000020918	RAVER1	97	50.070	Oryctolagus_cuniculus
ENSELUG00000023287	raver1	100	71.390	ENSORLG00000005458	raver1	98	71.369	Oryzias_latipes
ENSELUG00000023287	raver1	100	71.390	ENSORLG00020004392	raver1	98	71.369	Oryzias_latipes_hni
ENSELUG00000023287	raver1	100	71.253	ENSORLG00015017222	raver1	98	71.231	Oryzias_latipes_hsok
ENSELUG00000023287	raver1	100	67.308	ENSOMEG00000023956	raver1	98	91.837	Oryzias_melastigma
ENSELUG00000023287	raver1	93	51.842	ENSOGAG00000011071	RAVER1	96	50.951	Otolemur_garnettii
ENSELUG00000023287	raver1	67	57.341	ENSOARG00000015886	RAVER1	95	49.239	Ovis_aries
ENSELUG00000023287	raver1	93	51.604	ENSPPAG00000002611	RAVER1	96	51.226	Pan_paniscus
ENSELUG00000023287	raver1	94	51.351	ENSPPRG00000009912	RAVER1	96	50.880	Panthera_pardus
ENSELUG00000023287	raver1	93	51.604	ENSPTRG00000010466	RAVER1	96	51.226	Pan_troglodytes
ENSELUG00000023287	raver1	93	52.120	ENSPANG00000004122	RAVER1	96	51.226	Papio_anubis
ENSELUG00000023287	raver1	91	51.939	ENSPEMG00000016411	-	98	51.009	Peromyscus_maniculatus_bairdii
ENSELUG00000023287	raver1	93	54.113	ENSPCIG00000018695	-	97	54.376	Phascolarctos_cinereus
ENSELUG00000023287	raver1	100	70.487	ENSPFOG00000007016	raver1	98	70.777	Poecilia_formosa
ENSELUG00000023287	raver1	100	66.403	ENSPLAG00000020793	raver1	95	71.171	Poecilia_latipinna
ENSELUG00000023287	raver1	100	70.461	ENSPMEG00000011220	raver1	98	70.759	Poecilia_mexicana
ENSELUG00000023287	raver1	100	68.219	ENSPREG00000006864	raver1	98	68.480	Poecilia_reticulata
ENSELUG00000023287	raver1	93	51.001	ENSPPYG00000010514	RAVER1	82	51.153	Pongo_abelii
ENSELUG00000023287	raver1	93	51.701	ENSPCOG00000026605	RAVER1	96	51.436	Propithecus_coquereli
ENSELUG00000023287	raver1	91	52.580	ENSPVAG00000003689	RAVER1	98	51.984	Pteropus_vampyrus
ENSELUG00000023287	raver1	100	68.673	ENSPNYG00000013284	raver1	98	69.348	Pundamilia_nyererei
ENSELUG00000023287	raver1	98	71.350	ENSPNAG00000015476	raver1	98	70.702	Pygocentrus_nattereri
ENSELUG00000023287	raver1	93	52.545	ENSRBIG00000034702	RAVER1	95	52.750	Rhinopithecus_bieti
ENSELUG00000023287	raver1	93	52.682	ENSRROG00000031186	RAVER1	95	52.750	Rhinopithecus_roxellana
ENSELUG00000023287	raver1	93	52.335	ENSSBOG00000023423	RAVER1	95	52.758	Saimiri_boliviensis_boliviensis
ENSELUG00000023287	raver1	85	54.308	ENSSHAG00000008181	-	90	54.545	Sarcophilus_harrisii
ENSELUG00000023287	raver1	100	76.934	ENSSMAG00000004546	raver1	100	76.788	Scophthalmus_maximus
ENSELUG00000023287	raver1	100	77.105	ENSSDUG00000021063	raver1	100	78.261	Seriola_dumerili
ENSELUG00000023287	raver1	100	76.902	ENSSLDG00000014505	raver1	100	78.095	Seriola_lalandi_dorsalis
ENSELUG00000023287	raver1	100	77.174	ENSSPAG00000000688	raver1	100	77.959	Stegastes_partitus
ENSELUG00000023287	raver1	93	52.841	ENSSSCG00000013650	-	98	52.609	Sus_scrofa
ENSELUG00000023287	raver1	98	71.330	ENSTRUG00000025641	raver1	98	69.945	Takifugu_rubripes
ENSELUG00000023287	raver1	92	51.719	ENSTTRG00000009552	RAVER1	97	52.060	Tursiops_truncatus
ENSELUG00000023287	raver1	94	51.757	ENSUAMG00000020385	RAVER1	96	51.020	Ursus_americanus
ENSELUG00000023287	raver1	93	52.335	ENSVVUG00000028976	RAVER1	95	52.817	Vulpes_vulpes
ENSELUG00000023287	raver1	100	49.933	ENSXETG00000011622	raver1	96	50.576	Xenopus_tropicalis
ENSELUG00000023287	raver1	100	72.358	ENSXCOG00000016368	raver1	98	72.690	Xiphophorus_couchianus
ENSELUG00000023287	raver1	100	72.358	ENSXMAG00000000217	raver1	98	72.690	Xiphophorus_maculatus