EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000023393 (Gene tree)
Gene ID: 105014273
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 17013 bases
Position: chrLG02:27596874-27613886
Accession: 105014273
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000042220	Suf	PF05843.14	2.1e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000036094	-	4096	XM_010876451	ENSELUP00000042220	716 (aa)	XP_010874753	UPI0005771E3F

Gene Model

Click here to download ENSELUG00000023393's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000023393's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000023393	cstf3	100	89.679	ENSG00000176102	CSTF3	100	89.679	Homo_sapiens
ENSELUG00000023393	cstf3	100	95.258	ENSAPOG00000014054	cstf3	100	95.258	Acanthochromis_polyacanthus
ENSELUG00000023393	cstf3	99	90.268	ENSAMEG00000007187	CSTF3	98	90.268	Ailuropoda_melanoleuca
ENSELUG00000023393	cstf3	87	89.583	ENSACIG00000005539	cstf3	100	89.583	Amphilophus_citrinellus
ENSELUG00000023393	cstf3	100	95.258	ENSAOCG00000010930	cstf3	100	95.258	Amphiprion_ocellaris
ENSELUG00000023393	cstf3	100	95.258	ENSAPEG00000007903	cstf3	100	95.258	Amphiprion_percula
ENSELUG00000023393	cstf3	100	95.119	ENSATEG00000000190	cstf3	100	95.119	Anabas_testudineus
ENSELUG00000023393	cstf3	99	90.395	ENSAPLG00000007217	CSTF3	100	90.395	Anas_platyrhynchos
ENSELUG00000023393	cstf3	100	90.390	ENSACAG00000002823	CSTF3	100	90.390	Anolis_carolinensis
ENSELUG00000023393	cstf3	100	89.679	ENSANAG00000020699	CSTF3	95	95.556	Aotus_nancymaae
ENSELUG00000023393	cstf3	98	94.744	ENSACLG00000007820	cstf3	100	94.421	Astatotilapia_calliptera
ENSELUG00000023393	cstf3	100	91.783	ENSAMXG00000014198	cstf3	100	92.061	Astyanax_mexicanus
ENSELUG00000023393	cstf3	100	89.679	ENSBTAG00000008617	CSTF3	100	90.059	Bos_taurus
ENSELUG00000023393	cstf3	97	47.989	WBGene00006307	suf-1	99	47.989	Caenorhabditis_elegans
ENSELUG00000023393	cstf3	100	89.679	ENSCJAG00000005533	CSTF3	100	89.679	Callithrix_jacchus
ENSELUG00000023393	cstf3	100	89.679	ENSCAFG00000007264	CSTF3	100	89.679	Canis_familiaris
ENSELUG00000023393	cstf3	99	90.409	ENSCAFG00020002715	CSTF3	99	90.409	Canis_lupus_dingo
ENSELUG00000023393	cstf3	98	88.905	ENSCHIG00000016418	CSTF3	100	89.440	Capra_hircus
ENSELUG00000023393	cstf3	99	90.691	ENSTSYG00000000451	CSTF3	99	95.556	Carlito_syrichta
ENSELUG00000023393	cstf3	83	87.441	ENSCAPG00000010958	CSTF3	98	87.441	Cavia_aperea
ENSELUG00000023393	cstf3	100	89.679	ENSCPOG00000005545	CSTF3	100	89.762	Cavia_porcellus
ENSELUG00000023393	cstf3	100	89.679	ENSCCAG00000024790	CSTF3	96	95.556	Cebus_capucinus
ENSELUG00000023393	cstf3	100	89.679	ENSCATG00000007080	CSTF3	100	89.679	Cercocebus_atys
ENSELUG00000023393	cstf3	100	89.679	ENSCLAG00000016179	CSTF3	100	89.679	Chinchilla_lanigera
ENSELUG00000023393	cstf3	78	96.992	ENSCHOG00000002497	CSTF3	79	96.992	Choloepus_hoffmanni
ENSELUG00000023393	cstf3	100	89.972	ENSCPBG00000006753	CSTF3	100	89.972	Chrysemys_picta_bellii
ENSELUG00000023393	cstf3	99	62.465	ENSCING00000006401	-	98	62.553	Ciona_intestinalis
ENSELUG00000023393	cstf3	98	61.885	ENSCSAVG00000004851	-	100	61.885	Ciona_savignyi
ENSELUG00000023393	cstf3	100	89.679	ENSCANG00000035468	CSTF3	100	89.679	Colobus_angolensis_palliatus
ENSELUG00000023393	cstf3	100	90.098	ENSCGRG00001014773	Cstf3	100	90.098	Cricetulus_griseus_chok1gshd
ENSELUG00000023393	cstf3	100	90.098	ENSCGRG00000004142	Cstf3	100	90.098	Cricetulus_griseus_crigri
ENSELUG00000023393	cstf3	100	94.693	ENSCSEG00000014283	cstf3	100	94.693	Cynoglossus_semilaevis
ENSELUG00000023393	cstf3	100	93.863	ENSCVAG00000019739	cstf3	100	93.863	Cyprinodon_variegatus
ENSELUG00000023393	cstf3	100	92.887	ENSDARG00000018904	cstf3	100	92.887	Danio_rerio
ENSELUG00000023393	cstf3	99	89.916	ENSDNOG00000007366	CSTF3	99	89.916	Dasypus_novemcinctus
ENSELUG00000023393	cstf3	99	83.216	ENSDORG00000005898	Cstf3	99	83.216	Dipodomys_ordii
ENSELUG00000023393	cstf3	98	56.480	FBgn0003559	su(f)	98	56.480	Drosophila_melanogaster
ENSELUG00000023393	cstf3	90	84.268	ENSETEG00000017097	CSTF3	90	84.268	Echinops_telfairi
ENSELUG00000023393	cstf3	84	73.964	ENSEBUG00000015459	cstf3	96	73.964	Eptatretus_burgeri
ENSELUG00000023393	cstf3	98	90.429	ENSEASG00005019884	CSTF3	97	95.556	Equus_asinus_asinus
ENSELUG00000023393	cstf3	98	90.429	ENSECAG00000023338	CSTF3	97	95.556	Equus_caballus
ENSELUG00000023393	cstf3	100	84.658	ENSEEUG00000015167	CSTF3	100	84.658	Erinaceus_europaeus
ENSELUG00000023393	cstf3	100	89.819	ENSFCAG00000030711	CSTF3	100	89.819	Felis_catus
ENSELUG00000023393	cstf3	93	91.880	ENSFALG00000010764	CSTF3	100	88.633	Ficedula_albicollis
ENSELUG00000023393	cstf3	100	89.819	ENSFDAG00000012082	CSTF3	100	89.819	Fukomys_damarensis
ENSELUG00000023393	cstf3	100	94.003	ENSFHEG00000020623	cstf3	100	94.003	Fundulus_heteroclitus
ENSELUG00000023393	cstf3	100	93.463	ENSGMOG00000012275	cstf3	100	93.463	Gadus_morhua
ENSELUG00000023393	cstf3	100	89.694	ENSGALG00000011685	CSTF3	100	89.694	Gallus_gallus
ENSELUG00000023393	cstf3	100	94.282	ENSGAFG00000002181	cstf3	100	94.282	Gambusia_affinis
ENSELUG00000023393	cstf3	100	95.537	ENSGACG00000015997	cstf3	100	95.537	Gasterosteus_aculeatus
ENSELUG00000023393	cstf3	100	89.972	ENSGAGG00000006200	CSTF3	100	89.972	Gopherus_agassizii
ENSELUG00000023393	cstf3	99	84.626	ENSGGOG00000026591	CSTF3	96	90.667	Gorilla_gorilla
ENSELUG00000023393	cstf3	98	94.744	ENSHBUG00000016656	cstf3	100	94.421	Haplochromis_burtoni
ENSELUG00000023393	cstf3	100	89.540	ENSHGLG00000017834	CSTF3	100	89.540	Heterocephalus_glaber_female
ENSELUG00000023393	cstf3	100	89.540	ENSHGLG00100018042	CSTF3	100	89.540	Heterocephalus_glaber_male
ENSELUG00000023393	cstf3	98	92.057	ENSHCOG00000015218	cstf3	100	91.632	Hippocampus_comes
ENSELUG00000023393	cstf3	100	91.911	ENSIPUG00000013170	CSTF3	100	91.911	Ictalurus_punctatus
ENSELUG00000023393	cstf3	100	89.679	ENSSTOG00000013306	CSTF3	100	89.679	Ictidomys_tridecemlineatus
ENSELUG00000023393	cstf3	99	80.532	ENSJJAG00000018430	Cstf3	99	80.532	Jaculus_jaculus
ENSELUG00000023393	cstf3	100	93.166	ENSKMAG00000010916	cstf3	100	93.166	Kryptolebias_marmoratus
ENSELUG00000023393	cstf3	100	94.840	ENSLBEG00000002306	cstf3	100	94.840	Labrus_bergylta
ENSELUG00000023393	cstf3	100	90.098	ENSLACG00000017296	CSTF3	100	90.098	Latimeria_chalumnae
ENSELUG00000023393	cstf3	100	92.201	ENSLOCG00000004415	cstf3	100	92.201	Lepisosteus_oculatus
ENSELUG00000023393	cstf3	100	89.958	ENSLAFG00000008712	CSTF3	100	89.958	Loxodonta_africana
ENSELUG00000023393	cstf3	100	89.679	ENSMFAG00000029516	CSTF3	100	89.679	Macaca_fascicularis
ENSELUG00000023393	cstf3	100	89.679	ENSMMUG00000002542	CSTF3	100	89.679	Macaca_mulatta
ENSELUG00000023393	cstf3	100	89.679	ENSMNEG00000021807	CSTF3	100	89.679	Macaca_nemestrina
ENSELUG00000023393	cstf3	100	89.679	ENSMLEG00000039594	CSTF3	97	93.333	Mandrillus_leucophaeus
ENSELUG00000023393	cstf3	100	94.561	ENSMAMG00000020423	cstf3	100	94.561	Mastacembelus_armatus
ENSELUG00000023393	cstf3	98	94.744	ENSMZEG00005012082	cstf3	100	94.421	Maylandia_zebra
ENSELUG00000023393	cstf3	99	89.902	ENSMGAG00000001383	CSTF3	99	89.902	Meleagris_gallopavo
ENSELUG00000023393	cstf3	100	89.958	ENSMAUG00000002487	Cstf3	100	89.958	Mesocricetus_auratus
ENSELUG00000023393	cstf3	100	89.400	ENSMICG00000004784	CSTF3	100	89.400	Microcebus_murinus
ENSELUG00000023393	cstf3	100	90.098	ENSMOCG00000017583	Cstf3	100	90.098	Microtus_ochrogaster
ENSELUG00000023393	cstf3	99	94.625	ENSMMOG00000016026	cstf3	94	94.625	Mola_mola
ENSELUG00000023393	cstf3	100	89.819	ENSMODG00000009745	-	100	89.819	Monodelphis_domestica
ENSELUG00000023393	cstf3	100	79.387	ENSMODG00000025205	-	100	79.387	Monodelphis_domestica
ENSELUG00000023393	cstf3	100	94.840	ENSMALG00000012050	cstf3	100	94.840	Monopterus_albus
ENSELUG00000023393	cstf3	100	90.098	MGP_CAROLIEiJ_G0024026	Cstf3	100	90.098	Mus_caroli
ENSELUG00000023393	cstf3	100	90.098	ENSMUSG00000027176	Cstf3	100	90.098	Mus_musculus
ENSELUG00000023393	cstf3	100	90.098	MGP_PahariEiJ_G0025464	Cstf3	100	90.098	Mus_pahari
ENSELUG00000023393	cstf3	100	90.098	MGP_SPRETEiJ_G0024939	Cstf3	100	90.098	Mus_spretus
ENSELUG00000023393	cstf3	100	89.540	ENSMPUG00000011457	CSTF3	100	89.540	Mustela_putorius_furo
ENSELUG00000023393	cstf3	99	90.155	ENSMLUG00000003073	-	99	90.155	Myotis_lucifugus
ENSELUG00000023393	cstf3	100	87.587	ENSMLUG00000026022	-	100	87.587	Myotis_lucifugus
ENSELUG00000023393	cstf3	100	89.958	ENSNGAG00000010677	Cstf3	100	89.958	Nannospalax_galili
ENSELUG00000023393	cstf3	87	94.551	ENSNBRG00000007345	cstf3	100	94.551	Neolamprologus_brichardi
ENSELUG00000023393	cstf3	100	89.679	ENSNLEG00000017901	CSTF3	97	93.111	Nomascus_leucogenys
ENSELUG00000023393	cstf3	73	87.954	ENSMEUG00000005640	-	100	87.954	Notamacropus_eugenii
ENSELUG00000023393	cstf3	67	92.000	ENSOPRG00000000199	-	67	92.000	Ochotona_princeps
ENSELUG00000023393	cstf3	100	89.958	ENSODEG00000016737	-	100	89.958	Octodon_degus
ENSELUG00000023393	cstf3	89	77.673	ENSODEG00000006311	-	97	77.673	Octodon_degus
ENSELUG00000023393	cstf3	98	94.744	ENSONIG00000005563	cstf3	100	94.421	Oreochromis_niloticus
ENSELUG00000023393	cstf3	90	88.923	ENSOANG00000015140	CSTF3	100	88.923	Ornithorhynchus_anatinus
ENSELUG00000023393	cstf3	100	89.679	ENSOCUG00000015417	CSTF3	100	89.679	Oryctolagus_cuniculus
ENSELUG00000023393	cstf3	100	93.855	ENSORLG00000009762	cstf3	100	93.855	Oryzias_latipes
ENSELUG00000023393	cstf3	100	93.715	ENSORLG00020005540	cstf3	100	93.715	Oryzias_latipes_hni
ENSELUG00000023393	cstf3	100	93.575	ENSORLG00015003551	cstf3	100	93.575	Oryzias_latipes_hsok
ENSELUG00000023393	cstf3	100	94.134	ENSOMEG00000003848	cstf3	100	94.134	Oryzias_melastigma
ENSELUG00000023393	cstf3	100	89.306	ENSOGAG00000010229	CSTF3	100	89.306	Otolemur_garnettii
ENSELUG00000023393	cstf3	90	89.580	ENSOARG00000017271	CSTF3	99	89.580	Ovis_aries
ENSELUG00000023393	cstf3	99	87.024	ENSPPAG00000027358	CSTF3	99	87.024	Pan_paniscus
ENSELUG00000023393	cstf3	100	89.819	ENSPPRG00000016852	CSTF3	100	89.819	Panthera_pardus
ENSELUG00000023393	cstf3	100	89.819	ENSPTIG00000008716	CSTF3	100	89.819	Panthera_tigris_altaica
ENSELUG00000023393	cstf3	100	89.679	ENSPTRG00000003485	CSTF3	100	89.679	Pan_troglodytes
ENSELUG00000023393	cstf3	100	89.679	ENSPANG00000013722	CSTF3	97	93.333	Papio_anubis
ENSELUG00000023393	cstf3	100	92.469	ENSPKIG00000023648	cstf3	100	92.469	Paramormyrops_kingsleyae
ENSELUG00000023393	cstf3	100	89.972	ENSPSIG00000009173	CSTF3	100	89.972	Pelodiscus_sinensis
ENSELUG00000023393	cstf3	76	95.978	ENSPMGG00000000164	cstf3	99	95.978	Periophthalmus_magnuspinnatus
ENSELUG00000023393	cstf3	100	90.098	ENSPEMG00000011481	Cstf3	100	90.098	Peromyscus_maniculatus_bairdii
ENSELUG00000023393	cstf3	99	78.134	ENSPMAG00000007282	cstf3	99	78.303	Petromyzon_marinus
ENSELUG00000023393	cstf3	100	75.522	ENSPCIG00000030419	-	90	75.800	Phascolarctos_cinereus
ENSELUG00000023393	cstf3	100	87.344	ENSPCIG00000026406	-	100	89.440	Phascolarctos_cinereus
ENSELUG00000023393	cstf3	100	94.282	ENSPFOG00000017239	cstf3	100	94.282	Poecilia_formosa
ENSELUG00000023393	cstf3	100	94.282	ENSPLAG00000009456	cstf3	100	94.282	Poecilia_latipinna
ENSELUG00000023393	cstf3	100	94.282	ENSPMEG00000010320	cstf3	100	94.282	Poecilia_mexicana
ENSELUG00000023393	cstf3	100	94.142	ENSPREG00000013549	cstf3	100	94.142	Poecilia_reticulata
ENSELUG00000023393	cstf3	100	89.679	ENSPPYG00000003375	CSTF3	100	89.679	Pongo_abelii
ENSELUG00000023393	cstf3	71	93.728	ENSPCAG00000008025	-	71	93.728	Procavia_capensis
ENSELUG00000023393	cstf3	100	84.379	ENSPCOG00000014417	CSTF3	100	84.379	Propithecus_coquereli
ENSELUG00000023393	cstf3	100	84.658	ENSPVAG00000002350	CSTF3	100	84.658	Pteropus_vampyrus
ENSELUG00000023393	cstf3	98	94.744	ENSPNYG00000018259	cstf3	100	94.421	Pundamilia_nyererei
ENSELUG00000023393	cstf3	100	93.584	ENSPNAG00000020182	cstf3	100	93.584	Pygocentrus_nattereri
ENSELUG00000023393	cstf3	87	89.280	ENSRNOG00000012089	Cstf3	100	89.280	Rattus_norvegicus
ENSELUG00000023393	cstf3	99	88.999	ENSRBIG00000044258	CSTF3	100	89.440	Rhinopithecus_bieti
ENSELUG00000023393	cstf3	100	89.679	ENSRROG00000043450	CSTF3	100	89.679	Rhinopithecus_roxellana
ENSELUG00000023393	cstf3	100	89.679	ENSSBOG00000024764	CSTF3	98	95.556	Saimiri_boliviensis_boliviensis
ENSELUG00000023393	cstf3	100	89.400	ENSSHAG00000018128	-	100	89.400	Sarcophilus_harrisii
ENSELUG00000023393	cstf3	100	80.919	ENSSHAG00000003135	-	99	80.919	Sarcophilus_harrisii
ENSELUG00000023393	cstf3	100	93.305	ENSSFOG00015022133	cstf3	100	93.305	Scleropages_formosus
ENSELUG00000023393	cstf3	100	94.840	ENSSMAG00000002197	cstf3	100	94.840	Scophthalmus_maximus
ENSELUG00000023393	cstf3	100	95.258	ENSSDUG00000020426	cstf3	100	95.258	Seriola_dumerili
ENSELUG00000023393	cstf3	100	95.258	ENSSLDG00000025649	cstf3	100	95.258	Seriola_lalandi_dorsalis
ENSELUG00000023393	cstf3	100	89.261	ENSSARG00000000391	CSTF3	100	89.261	Sorex_araneus
ENSELUG00000023393	cstf3	96	90.318	ENSSPUG00000010546	CSTF3	100	90.318	Sphenodon_punctatus
ENSELUG00000023393	cstf3	100	95.397	ENSSPAG00000004958	cstf3	100	95.397	Stegastes_partitus
ENSELUG00000023393	cstf3	99	89.385	ENSSSCG00000040954	CSTF3	100	89.385	Sus_scrofa
ENSELUG00000023393	cstf3	99	90.113	ENSTGUG00000005010	CSTF3	100	90.113	Taeniopygia_guttata
ENSELUG00000023393	cstf3	100	94.003	ENSTRUG00000004959	cstf3	100	94.003	Takifugu_rubripes
ENSELUG00000023393	cstf3	99	94.358	ENSTNIG00000013811	cstf3	99	94.358	Tetraodon_nigroviridis
ENSELUG00000023393	cstf3	90	86.760	ENSTBEG00000001544	CSTF3	90	86.760	Tupaia_belangeri
ENSELUG00000023393	cstf3	100	86.750	ENSTTRG00000016366	CSTF3	100	86.750	Tursiops_truncatus
ENSELUG00000023393	cstf3	99	90.127	ENSUMAG00000018971	CSTF3	99	90.127	Ursus_maritimus
ENSELUG00000023393	cstf3	100	89.540	ENSVPAG00000007800	CSTF3	100	89.540	Vicugna_pacos
ENSELUG00000023393	cstf3	99	90.409	ENSVVUG00000014938	CSTF3	100	89.440	Vulpes_vulpes
ENSELUG00000023393	cstf3	88	73.438	ENSXETG00000021399	cstf3	100	74.757	Xenopus_tropicalis
ENSELUG00000023393	cstf3	66	42.236	ENSXETG00000017946	-	99	42.236	Xenopus_tropicalis
ENSELUG00000023393	cstf3	87	94.071	ENSXCOG00000011741	cstf3	100	94.071	Xiphophorus_couchianus
ENSELUG00000023393	cstf3	100	94.421	ENSXMAG00000009545	cstf3	100	94.421	Xiphophorus_maculatus