EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000023536 (Gene tree)
Gene ID: 105027913
Gene Symbol: eef1a1l1
Alias: fi48f03|wu:fi48f03|zgc:109885
Full Name: elongation factor 1-alpha%2C oocyte form
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 11929 bases
Position: chrLG10:4993685-5005613
Accession: 105027913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000042346	GTP_EFTU	PF00009.27	5.4e-53	1	1
ENSELUP00000042338	GTP_EFTU	PF00009.27	5.5e-53	1	1
ENSELUP00000042327	GTP_EFTU	PF00009.27	6.3e-53	1	1
ENSELUP00000042300	GTP_EFTU	PF00009.27	2.8e-44	1	1
ENSELUP00000042338	GTP_EFTU_D2	PF03144.25	4.2e-14	1	1
ENSELUP00000042327	GTP_EFTU_D2	PF03144.25	4.4e-14	1	1
ENSELUP00000042346	GTP_EFTU_D2	PF03144.25	2.3e-09	1	1
ENSELUP00000042327	GTP_EFTU_D3	PF03143.17	1.2e-40	1	1
ENSELUP00000042338	GTP_EFTU_D3	PF03143.17	1.2e-40	1	1
ENSELUP00000042346	GTP_EFTU_D3	PF03143.17	1.5e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000036304	-	3189	-	ENSELUP00000042338	462 (aa)	-	-
ENSELUT00000036286	-	2859	XM_013135667	ENSELUP00000042327	461 (aa)	XP_012991121	UPI000661E3E5
ENSELUT00000036245	-	723	-	ENSELUP00000042300	240 (aa)	-	-
ENSELUT00000036327	-	3189	-	ENSELUP00000042346	462 (aa)	-	-

Gene Model

Click here to download ENSELUG00000023536's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000023536's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000023536	eef1a1l1	100	90.909	ENSELUG00000012084	eef1a1b	99	90.870
ENSELUG00000023536	eef1a1l1	96	40.486	ENSELUG00000023492	gspt1l	74	37.698
ENSELUG00000023536	eef1a1l1	95	38.182	ENSELUG00000019323	-	80	37.246
ENSELUG00000023536	eef1a1l1	94	44.033	ENSELUG00000006444	hbs1l	62	39.108
ENSELUG00000023536	eef1a1l1	95	30.958	ENSELUG00000013410	tufm	83	30.889
ENSELUG00000023536	eef1a1l1	98	70.742	ENSELUG00000007495	si:dkey-37o8.1	100	70.742

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000023536	eef1a1l1	67	88.599	ENSAPOG00000004757	eef1a1l1	99	98.438	Acanthochromis_polyacanthus
ENSELUG00000023536	eef1a1l1	100	79.176	ENSAMEG00000004317	-	100	79.176	Ailuropoda_melanoleuca
ENSELUG00000023536	eef1a1l1	100	84.382	ENSAMEG00000009677	-	100	84.382	Ailuropoda_melanoleuca
ENSELUG00000023536	eef1a1l1	100	85.466	ENSCAFG00000013249	-	100	85.466	Canis_familiaris
ENSELUG00000023536	eef1a1l1	100	85.466	ENSCAFG00020020007	-	100	85.466	Canis_lupus_dingo
ENSELUG00000023536	eef1a1l1	100	89.805	ENSCPBG00000000646	-	100	89.805	Chrysemys_picta_bellii
ENSELUG00000023536	eef1a1l1	100	90.456	ENSCPBG00000000748	-	100	90.456	Chrysemys_picta_bellii
ENSELUG00000023536	eef1a1l1	100	93.723	ENSDARG00000020850	eef1a1l1	99	93.913	Danio_rerio
ENSELUG00000023536	eef1a1l1	85	82.741	ENSEASG00005018013	-	99	82.741	Equus_asinus_asinus
ENSELUG00000023536	eef1a1l1	98	87.885	ENSEASG00005012365	-	96	88.389	Equus_asinus_asinus
ENSELUG00000023536	eef1a1l1	100	86.117	ENSECAG00000022260	-	100	86.117	Equus_caballus
ENSELUG00000023536	eef1a1l1	100	88.286	ENSFCAG00000030530	-	100	88.286	Felis_catus
ENSELUG00000023536	eef1a1l1	100	89.154	ENSGAGG00000000648	-	100	89.154	Gopherus_agassizii
ENSELUG00000023536	eef1a1l1	100	89.805	ENSGAGG00000000642	-	100	89.805	Gopherus_agassizii
ENSELUG00000023536	eef1a1l1	90	90.557	ENSLBEG00000002790	eef1a1l1	99	90.557	Labrus_bergylta
ENSELUG00000023536	eef1a1l1	100	86.117	ENSLAFG00000028081	-	99	86.117	Loxodonta_africana
ENSELUG00000023536	eef1a1l1	100	88.069	ENSLAFG00000025161	-	100	88.069	Loxodonta_africana
ENSELUG00000023536	eef1a1l1	98	81.028	ENSOANG00000012066	-	100	91.040	Ornithorhynchus_anatinus
ENSELUG00000023536	eef1a1l1	90	90.073	ENSOMEG00000006888	-	99	90.073	Oryzias_melastigma
ENSELUG00000023536	eef1a1l1	100	87.636	ENSOARG00000002943	-	100	87.636	Ovis_aries
ENSELUG00000023536	eef1a1l1	100	83.514	ENSPPRG00000008525	-	100	83.514	Panthera_pardus
ENSELUG00000023536	eef1a1l1	99	87.281	ENSPPRG00000005678	-	98	87.281	Panthera_pardus
ENSELUG00000023536	eef1a1l1	100	85.466	ENSPTIG00000006939	-	100	85.466	Panthera_tigris_altaica
ENSELUG00000023536	eef1a1l1	100	88.937	ENSPSIG00000008610	-	100	88.937	Pelodiscus_sinensis
ENSELUG00000023536	eef1a1l1	66	98.148	ENSPVAG00000007682	-	65	98.148	Pteropus_vampyrus
ENSELUG00000023536	eef1a1l1	100	82.646	ENSSMAG00000018455	-	99	82.646	Scophthalmus_maximus
ENSELUG00000023536	eef1a1l1	100	89.154	ENSSPUG00000003655	-	100	89.154	Sphenodon_punctatus
ENSELUG00000023536	eef1a1l1	98	82.743	ENSSSCG00000038035	-	100	82.646	Sus_scrofa
ENSELUG00000023536	eef1a1l1	100	87.636	ENSSSCG00000034113	-	100	87.636	Sus_scrofa
ENSELUG00000023536	eef1a1l1	100	82.646	ENSUAMG00000008928	-	100	82.646	Ursus_americanus
ENSELUG00000023536	eef1a1l1	100	76.139	ENSUAMG00000007676	-	100	76.139	Ursus_americanus
ENSELUG00000023536	eef1a1l1	50	85.153	ENSUAMG00000006085	-	96	85.153	Ursus_americanus
ENSELUG00000023536	eef1a1l1	100	84.382	ENSUMAG00000013211	-	100	84.382	Ursus_maritimus
ENSELUG00000023536	eef1a1l1	100	85.249	ENSVVUG00000026886	-	100	85.249	Vulpes_vulpes
ENSELUG00000023536	eef1a1l1	100	91.974	ENSXETG00000022604	eef1a1o	100	91.974	Xenopus_tropicalis