EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000023650 (Gene tree)
Gene ID: 105017048
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 11376 bases
Position: chrLG17:13403153-13414528
Accession: 105017048
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000042417	R3H	PF01424.22	4.7e-12	1	1
ENSELUP00000042421	R3H	PF01424.22	7.5e-11	1	1
ENSELUP00000042431	R3H	PF01424.22	8.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000036489	-	1676	XM_010881345	ENSELUP00000042421	408 (aa)	XP_010879647	UPI0005771078
ENSELUT00000036472	-	912	-	ENSELUP00000042417	303 (aa)	-	-
ENSELUT00000036504	-	2151	-	ENSELUP00000042431	411 (aa)	-	-

Gene Model

Click here to download ENSELUG00000023650's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000023650's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000023650	r3hcc1	78	46.218	ENSG00000104679	R3HCC1	86	41.732	Homo_sapiens
ENSELUG00000023650	r3hcc1	98	47.330	ENSAPOG00000003616	r3hcc1	87	48.157	Acanthochromis_polyacanthus
ENSELUG00000023650	r3hcc1	77	43.220	ENSAMEG00000002963	R3HCC1	85	35.402	Ailuropoda_melanoleuca
ENSELUG00000023650	r3hcc1	100	40.596	ENSACIG00000017144	r3hcc1	95	40.783	Amphilophus_citrinellus
ENSELUG00000023650	r3hcc1	99	48.578	ENSAOCG00000003945	r3hcc1	96	48.578	Amphiprion_ocellaris
ENSELUG00000023650	r3hcc1	99	49.760	ENSAPEG00000003613	r3hcc1	96	48.810	Amphiprion_percula
ENSELUG00000023650	r3hcc1	97	51.724	ENSATEG00000023860	r3hcc1	97	51.629	Anabas_testudineus
ENSELUG00000023650	r3hcc1	94	53.333	ENSACAG00000016627	R3HCC1	92	36.952	Anolis_carolinensis
ENSELUG00000023650	r3hcc1	99	35.749	ENSANAG00000036169	R3HCC1	92	35.749	Aotus_nancymaae
ENSELUG00000023650	r3hcc1	76	43.220	ENSBTAG00000025830	R3HCC1	89	35.780	Bos_taurus
ENSELUG00000023650	r3hcc1	99	33.413	ENSCJAG00000020118	R3HCC1	92	33.413	Callithrix_jacchus
ENSELUG00000023650	r3hcc1	63	54.054	ENSCAFG00000009210	R3HCC1	89	34.491	Canis_familiaris
ENSELUG00000023650	r3hcc1	88	31.088	ENSCAFG00020012870	R3HCC1	80	31.880	Canis_lupus_dingo
ENSELUG00000023650	r3hcc1	99	37.500	ENSCHIG00000009107	R3HCC1	93	37.500	Capra_hircus
ENSELUG00000023650	r3hcc1	99	35.023	ENSTSYG00000000511	R3HCC1	72	35.335	Carlito_syrichta
ENSELUG00000023650	r3hcc1	94	33.787	ENSCAPG00000015813	R3HCC1	99	33.787	Cavia_aperea
ENSELUG00000023650	r3hcc1	99	36.522	ENSCPOG00000009696	R3HCC1	94	36.522	Cavia_porcellus
ENSELUG00000023650	r3hcc1	99	35.784	ENSCCAG00000037811	R3HCC1	92	36.430	Cebus_capucinus
ENSELUG00000023650	r3hcc1	63	55.405	ENSCATG00000032971	R3HCC1	92	34.951	Cercocebus_atys
ENSELUG00000023650	r3hcc1	80	42.975	ENSCLAG00000015556	R3HCC1	77	36.215	Chinchilla_lanigera
ENSELUG00000023650	r3hcc1	63	55.405	ENSCSAG00000016250	R3HCC1	85	35.214	Chlorocebus_sabaeus
ENSELUG00000023650	r3hcc1	99	35.308	ENSCHOG00000000396	R3HCC1	89	34.773	Choloepus_hoffmanni
ENSELUG00000023650	r3hcc1	95	33.602	ENSCANG00000029441	R3HCC1	58	57.377	Colobus_angolensis_palliatus
ENSELUG00000023650	r3hcc1	73	47.321	ENSCGRG00001014977	R3hcc1	91	33.846	Cricetulus_griseus_chok1gshd
ENSELUG00000023650	r3hcc1	73	47.321	ENSCGRG00000004454	R3hcc1	91	33.846	Cricetulus_griseus_crigri
ENSELUG00000023650	r3hcc1	98	47.922	ENSCSEG00000005748	r3hcc1	94	47.922	Cynoglossus_semilaevis
ENSELUG00000023650	r3hcc1	84	41.341	ENSCVAG00000002640	r3hcc1	90	41.341	Cyprinodon_variegatus
ENSELUG00000023650	r3hcc1	98	45.721	ENSDARG00000099593	r3hcc1	94	44.686	Danio_rerio
ENSELUG00000023650	r3hcc1	99	34.813	ENSDNOG00000007168	R3HCC1	85	35.047	Dasypus_novemcinctus
ENSELUG00000023650	r3hcc1	63	55.405	ENSDORG00000026365	R3hcc1	92	33.477	Dipodomys_ordii
ENSELUG00000023650	r3hcc1	99	31.494	ENSETEG00000001147	R3HCC1	90	30.631	Echinops_telfairi
ENSELUG00000023650	r3hcc1	98	35.431	ENSEASG00005018782	R3HCC1	73	35.431	Equus_asinus_asinus
ENSELUG00000023650	r3hcc1	99	34.884	ENSECAG00000025013	R3HCC1	90	35.116	Equus_caballus
ENSELUG00000023650	r3hcc1	99	32.494	ENSEEUG00000011918	R3HCC1	89	32.579	Erinaceus_europaeus
ENSELUG00000023650	r3hcc1	99	35.646	ENSFCAG00000012395	R3HCC1	90	36.620	Felis_catus
ENSELUG00000023650	r3hcc1	72	49.474	ENSFDAG00000001572	R3HCC1	93	33.641	Fukomys_damarensis
ENSELUG00000023650	r3hcc1	92	42.059	ENSGMOG00000017590	-	99	41.742	Gadus_morhua
ENSELUG00000023650	r3hcc1	98	45.700	ENSGAFG00000008747	-	91	46.565	Gambusia_affinis
ENSELUG00000023650	r3hcc1	98	47.202	ENSGACG00000008447	r3hcc1	90	47.202	Gasterosteus_aculeatus
ENSELUG00000023650	r3hcc1	99	35.104	ENSGGOG00000013817	R3HCC1	93	35.104	Gorilla_gorilla
ENSELUG00000023650	r3hcc1	62	64.286	ENSHBUG00000022250	-	64	68.421	Haplochromis_burtoni
ENSELUG00000023650	r3hcc1	80	41.353	ENSHGLG00000010517	R3HCC1	86	35.814	Heterocephalus_glaber_female
ENSELUG00000023650	r3hcc1	80	41.353	ENSHGLG00100006388	R3HCC1	86	35.814	Heterocephalus_glaber_male
ENSELUG00000023650	r3hcc1	98	44.499	ENSHCOG00000011745	r3hcc1	86	46.098	Hippocampus_comes
ENSELUG00000023650	r3hcc1	99	47.901	ENSIPUG00000024504	r3hcc1	82	48.655	Ictalurus_punctatus
ENSELUG00000023650	r3hcc1	70	49.000	ENSSTOG00000027130	R3HCC1	61	49.080	Ictidomys_tridecemlineatus
ENSELUG00000023650	r3hcc1	98	34.091	ENSJJAG00000013075	R3hcc1	93	34.676	Jaculus_jaculus
ENSELUG00000023650	r3hcc1	100	47.381	ENSKMAG00000000286	r3hcc1	100	48.926	Kryptolebias_marmoratus
ENSELUG00000023650	r3hcc1	98	34.845	ENSLACG00000011894	R3HCC1	92	34.845	Latimeria_chalumnae
ENSELUG00000023650	r3hcc1	99	46.948	ENSLOCG00000015442	r3hcc1	95	44.175	Lepisosteus_oculatus
ENSELUG00000023650	r3hcc1	61	55.405	ENSLAFG00000016137	R3HCC1	89	34.348	Loxodonta_africana
ENSELUG00000023650	r3hcc1	63	55.405	ENSMFAG00000032894	R3HCC1	92	35.135	Macaca_fascicularis
ENSELUG00000023650	r3hcc1	98	34.346	ENSMMUG00000016655	R3HCC1	92	34.951	Macaca_mulatta
ENSELUG00000023650	r3hcc1	99	35.347	ENSMNEG00000043283	R3HCC1	92	35.766	Macaca_nemestrina
ENSELUG00000023650	r3hcc1	63	55.405	ENSMLEG00000030147	R3HCC1	92	35.437	Mandrillus_leucophaeus
ENSELUG00000023650	r3hcc1	100	49.157	ENSMAMG00000018146	r3hcc1	100	49.282	Mastacembelus_armatus
ENSELUG00000023650	r3hcc1	68	46.000	ENSMGAG00000001356	R3HCC1	81	33.253	Meleagris_gallopavo
ENSELUG00000023650	r3hcc1	76	43.200	ENSMAUG00000016096	R3hcc1	57	49.315	Mesocricetus_auratus
ENSELUG00000023650	r3hcc1	99	35.211	ENSMICG00000011146	R3HCC1	92	35.461	Microcebus_murinus
ENSELUG00000023650	r3hcc1	86	41.060	ENSMOCG00000018508	R3hcc1	93	35.982	Microtus_ochrogaster
ENSELUG00000023650	r3hcc1	75	33.333	ENSMODG00000016809	-	70	33.333	Monodelphis_domestica
ENSELUG00000023650	r3hcc1	98	47.156	ENSMALG00000000731	r3hcc1	98	47.393	Monopterus_albus
ENSELUG00000023650	r3hcc1	69	49.474	MGP_CAROLIEiJ_G0019467	R3hcc1	91	33.113	Mus_caroli
ENSELUG00000023650	r3hcc1	69	49.474	ENSMUSG00000034194	R3hcc1	91	34.141	Mus_musculus
ENSELUG00000023650	r3hcc1	62	56.757	MGP_PahariEiJ_G0030484	R3hcc1	58	45.513	Mus_pahari
ENSELUG00000023650	r3hcc1	69	49.474	MGP_SPRETEiJ_G0020359	R3hcc1	57	45.860	Mus_spretus
ENSELUG00000023650	r3hcc1	62	54.667	ENSMPUG00000003457	R3HCC1	81	34.404	Mustela_putorius_furo
ENSELUG00000023650	r3hcc1	61	56.757	ENSMLUG00000000266	R3HCC1	58	48.077	Myotis_lucifugus
ENSELUG00000023650	r3hcc1	64	56.757	ENSNGAG00000016747	R3hcc1	93	34.899	Nannospalax_galili
ENSELUG00000023650	r3hcc1	83	77.778	ENSNBRG00000016975	-	77	77.778	Neolamprologus_brichardi
ENSELUG00000023650	r3hcc1	91	33.838	ENSNLEG00000015944	R3HCC1	80	33.838	Nomascus_leucogenys
ENSELUG00000023650	r3hcc1	98	35.632	ENSMEUG00000010587	R3HCC1	91	35.484	Notamacropus_eugenii
ENSELUG00000023650	r3hcc1	99	35.129	ENSOPRG00000013390	R3HCC1	89	36.300	Ochotona_princeps
ENSELUG00000023650	r3hcc1	76	46.154	ENSODEG00000007529	R3HCC1	93	33.114	Octodon_degus
ENSELUG00000023650	r3hcc1	62	55.844	ENSOANG00000013877	R3HCC1	90	33.632	Ornithorhynchus_anatinus
ENSELUG00000023650	r3hcc1	99	34.411	ENSOCUG00000023554	R3HCC1	80	35.253	Oryctolagus_cuniculus
ENSELUG00000023650	r3hcc1	98	42.752	ENSORLG00000016816	r3hcc1	98	42.439	Oryzias_latipes
ENSELUG00000023650	r3hcc1	98	42.716	ENSORLG00020012005	r3hcc1	98	42.439	Oryzias_latipes_hni
ENSELUG00000023650	r3hcc1	98	42.365	ENSORLG00015007018	r3hcc1	98	42.195	Oryzias_latipes_hsok
ENSELUG00000023650	r3hcc1	98	43.243	ENSOMEG00000000816	r3hcc1	98	43.243	Oryzias_melastigma
ENSELUG00000023650	r3hcc1	99	35.154	ENSOGAG00000001291	R3HCC1	85	36.028	Otolemur_garnettii
ENSELUG00000023650	r3hcc1	99	36.009	ENSOARG00000010146	R3HCC1	90	36.009	Ovis_aries
ENSELUG00000023650	r3hcc1	85	41.549	ENSPPAG00000033165	R3HCC1	93	34.862	Pan_paniscus
ENSELUG00000023650	r3hcc1	99	35.392	ENSPPRG00000002522	R3HCC1	93	35.392	Panthera_pardus
ENSELUG00000023650	r3hcc1	96	36.893	ENSPTIG00000011230	R3HCC1	95	36.893	Panthera_tigris_altaica
ENSELUG00000023650	r3hcc1	85	41.549	ENSPTRG00000020076	R3HCC1	92	34.223	Pan_troglodytes
ENSELUG00000023650	r3hcc1	63	55.405	ENSPANG00000000453	R3HCC1	92	35.437	Papio_anubis
ENSELUG00000023650	r3hcc1	95	46.582	ENSPKIG00000014426	-	95	46.582	Paramormyrops_kingsleyae
ENSELUG00000023650	r3hcc1	95	47.870	ENSPKIG00000020397	-	95	47.870	Paramormyrops_kingsleyae
ENSELUG00000023650	r3hcc1	98	36.468	ENSPSIG00000017664	R3HCC1	90	36.927	Pelodiscus_sinensis
ENSELUG00000023650	r3hcc1	60	61.905	ENSPMGG00000007792	r3hcc1	94	33.958	Periophthalmus_magnuspinnatus
ENSELUG00000023650	r3hcc1	84	40.741	ENSPEMG00000007118	R3hcc1	91	33.034	Peromyscus_maniculatus_bairdii
ENSELUG00000023650	r3hcc1	51	63.043	ENSPCIG00000022718	-	84	32.864	Phascolarctos_cinereus
ENSELUG00000023650	r3hcc1	99	47.816	ENSPFOG00000022301	r3hcc1	87	47.242	Poecilia_formosa
ENSELUG00000023650	r3hcc1	99	47.087	ENSPLAG00000010794	r3hcc1	87	47.002	Poecilia_latipinna
ENSELUG00000023650	r3hcc1	99	47.816	ENSPMEG00000022515	r3hcc1	87	47.242	Poecilia_mexicana
ENSELUG00000023650	r3hcc1	98	46.324	ENSPREG00000000713	r3hcc1	86	46.247	Poecilia_reticulata
ENSELUG00000023650	r3hcc1	68	49.451	ENSPPYG00000018436	R3HCC1	98	34.597	Pongo_abelii
ENSELUG00000023650	r3hcc1	75	43.478	ENSPCAG00000012229	R3HCC1	60	50.000	Procavia_capensis
ENSELUG00000023650	r3hcc1	64	55.405	ENSPCOG00000027554	R3HCC1	93	35.730	Propithecus_coquereli
ENSELUG00000023650	r3hcc1	98	35.680	ENSPVAG00000009829	R3HCC1	88	35.172	Pteropus_vampyrus
ENSELUG00000023650	r3hcc1	96	48.883	ENSPNAG00000023875	r3hcc1	94	50.630	Pygocentrus_nattereri
ENSELUG00000023650	r3hcc1	69	49.474	ENSRNOG00000016777	AABR07018321.1	75	32.527	Rattus_norvegicus
ENSELUG00000023650	r3hcc1	99	34.954	ENSRBIG00000028045	R3HCC1	93	35.550	Rhinopithecus_bieti
ENSELUG00000023650	r3hcc1	96	35.154	ENSRROG00000031126	R3HCC1	82	35.780	Rhinopithecus_roxellana
ENSELUG00000023650	r3hcc1	99	35.697	ENSSBOG00000022590	R3HCC1	93	35.484	Saimiri_boliviensis_boliviensis
ENSELUG00000023650	r3hcc1	86	43.443	ENSSHAG00000016526	-	53	56.452	Sarcophilus_harrisii
ENSELUG00000023650	r3hcc1	99	50.732	ENSSFOG00015013507	r3hcc1	99	51.574	Scleropages_formosus
ENSELUG00000023650	r3hcc1	98	48.675	ENSSMAG00000008647	r3hcc1	98	48.675	Scophthalmus_maximus
ENSELUG00000023650	r3hcc1	98	50.976	ENSSDUG00000022786	r3hcc1	95	48.585	Seriola_dumerili
ENSELUG00000023650	r3hcc1	98	51.463	ENSSLDG00000019031	r3hcc1	95	48.585	Seriola_lalandi_dorsalis
ENSELUG00000023650	r3hcc1	99	48.193	ENSSPAG00000013497	r3hcc1	96	48.193	Stegastes_partitus
ENSELUG00000023650	r3hcc1	76	47.059	ENSSSCG00000039915	-	95	36.117	Sus_scrofa
ENSELUG00000023650	r3hcc1	98	33.981	ENSSSCG00000037347	-	85	32.952	Sus_scrofa
ENSELUG00000023650	r3hcc1	99	43.627	ENSTRUG00000015880	r3hcc1	97	42.482	Takifugu_rubripes
ENSELUG00000023650	r3hcc1	63	58.108	ENSTTRG00000012247	R3HCC1	89	33.716	Tursiops_truncatus
ENSELUG00000023650	r3hcc1	78	41.221	ENSUAMG00000007344	R3HCC1	93	35.862	Ursus_americanus
ENSELUG00000023650	r3hcc1	77	44.444	ENSVVUG00000005056	R3HCC1	89	35.104	Vulpes_vulpes
ENSELUG00000023650	r3hcc1	95	41.687	ENSXCOG00000017626	r3hcc1	84	44.836	Xiphophorus_couchianus
ENSELUG00000023650	r3hcc1	98	43.560	ENSXMAG00000018375	r3hcc1	91	47.089	Xiphophorus_maculatus