EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000023774 (Gene tree)
Gene ID: 105015877
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: la-related protein 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 19719 bases
Position: chrLG15:24814334-24834052
Accession: 105015877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000025020	La	PF05383.17	6.9e-21	1	1
ENSELUP00000025035	La	PF05383.17	1.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000036634	-	2514	-	ENSELUP00000025035	837 (aa)	-	-
ENSELUT00000036602	-	2414	XM_020054468	ENSELUP00000025020	765 (aa)	XP_019910027	-

Gene Model

Click here to download ENSELUG00000023774's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000023774's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000023774	larp1b	84	49.714	ENSELUG00000019403	larp1	60	51.437

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000023774	larp1b	87	43.896	ENSG00000138709	LARP1B	100	45.617	Homo_sapiens
ENSELUG00000023774	larp1b	99	58.134	ENSAPOG00000020101	larp1b	76	62.754	Acanthochromis_polyacanthus
ENSELUG00000023774	larp1b	69	46.259	ENSAMEG00000002748	LARP1B	67	56.423	Ailuropoda_melanoleuca
ENSELUG00000023774	larp1b	92	63.873	ENSACIG00000023890	larp1b	77	63.203	Amphilophus_citrinellus
ENSELUG00000023774	larp1b	99	55.120	ENSAOCG00000014268	larp1b	99	53.217	Amphiprion_ocellaris
ENSELUG00000023774	larp1b	99	57.775	ENSAPEG00000004126	larp1b	76	63.173	Amphiprion_percula
ENSELUG00000023774	larp1b	99	57.935	ENSATEG00000017849	larp1b	75	63.690	Anabas_testudineus
ENSELUG00000023774	larp1b	75	52.119	ENSAPLG00000010129	LARP1B	67	54.729	Anas_platyrhynchos
ENSELUG00000023774	larp1b	74	56.213	ENSACAG00000011338	LARP1B	55	72.626	Anolis_carolinensis
ENSELUG00000023774	larp1b	64	53.053	ENSANAG00000034618	LARP1B	67	50.175	Aotus_nancymaae
ENSELUG00000023774	larp1b	95	62.973	ENSACLG00000011948	larp1b	74	62.833	Astatotilapia_calliptera
ENSELUG00000023774	larp1b	90	57.504	ENSAMXG00000006805	larp1b	68	57.263	Astyanax_mexicanus
ENSELUG00000023774	larp1b	86	45.310	ENSBTAG00000012135	LARP1B	77	48.255	Bos_taurus
ENSELUG00000023774	larp1b	72	54.685	ENSCJAG00000003338	LARP1B	74	54.321	Callithrix_jacchus
ENSELUG00000023774	larp1b	82	52.019	ENSCAFG00000003831	LARP1B	73	56.940	Canis_familiaris
ENSELUG00000023774	larp1b	72	56.260	ENSCAFG00020018899	LARP1B	98	48.110	Canis_lupus_dingo
ENSELUG00000023774	larp1b	77	52.793	ENSCHIG00000023144	LARP1B	98	49.827	Capra_hircus
ENSELUG00000023774	larp1b	72	53.858	ENSCCAG00000021948	LARP1B	70	53.707	Cebus_capucinus
ENSELUG00000023774	larp1b	77	51.681	ENSCATG00000013541	LARP1B	69	52.727	Cercocebus_atys
ENSELUG00000023774	larp1b	72	53.707	ENSCSAG00000003582	LARP1B	70	53.404	Chlorocebus_sabaeus
ENSELUG00000023774	larp1b	70	69.620	ENSCHOG00000005354	LARP1B	60	70.064	Choloepus_hoffmanni
ENSELUG00000023774	larp1b	88	47.012	ENSCPBG00000017480	LARP1B	58	57.188	Chrysemys_picta_bellii
ENSELUG00000023774	larp1b	78	52.355	ENSCANG00000026958	LARP1B	99	47.233	Colobus_angolensis_palliatus
ENSELUG00000023774	larp1b	99	63.080	ENSCSEG00000013519	larp1b	63	64.356	Cynoglossus_semilaevis
ENSELUG00000023774	larp1b	99	53.194	ENSCVAG00000005046	larp1b	88	51.165	Cyprinodon_variegatus
ENSELUG00000023774	larp1b	99	56.611	ENSDARG00000061169	larp1b	74	63.439	Danio_rerio
ENSELUG00000023774	larp1b	63	47.925	ENSDNOG00000018765	-	64	57.726	Dasypus_novemcinctus
ENSELUG00000023774	larp1b	62	56.812	ENSETEG00000012497	LARP1B	54	56.598	Echinops_telfairi
ENSELUG00000023774	larp1b	90	38.020	ENSEBUG00000003668	larp1b	65	44.298	Eptatretus_burgeri
ENSELUG00000023774	larp1b	72	55.708	ENSEASG00005018106	LARP1B	98	48.454	Equus_asinus_asinus
ENSELUG00000023774	larp1b	86	45.649	ENSECAG00000001088	LARP1B	55	56.082	Equus_caballus
ENSELUG00000023774	larp1b	63	47.834	ENSFCAG00000014650	-	63	57.471	Felis_catus
ENSELUG00000023774	larp1b	69	54.050	ENSFALG00000008098	LARP1B	67	54.193	Ficedula_albicollis
ENSELUG00000023774	larp1b	93	64.200	ENSFHEG00000010264	larp1b	85	52.030	Fundulus_heteroclitus
ENSELUG00000023774	larp1b	86	67.925	ENSGMOG00000005207	larp1b	62	70.718	Gadus_morhua
ENSELUG00000023774	larp1b	69	55.079	ENSGALG00000010207	LARP1B	59	55.397	Gallus_gallus
ENSELUG00000023774	larp1b	99	54.515	ENSGAFG00000012012	larp1b	75	63.043	Gambusia_affinis
ENSELUG00000023774	larp1b	72	59.549	ENSGACG00000004609	larp1b	65	60.536	Gasterosteus_aculeatus
ENSELUG00000023774	larp1b	69	56.714	ENSGAGG00000017209	LARP1B	68	45.718	Gopherus_agassizii
ENSELUG00000023774	larp1b	72	52.799	ENSGGOG00000015900	LARP1B	70	52.648	Gorilla_gorilla
ENSELUG00000023774	larp1b	99	59.171	ENSHBUG00000009730	larp1b	76	64.390	Haplochromis_burtoni
ENSELUG00000023774	larp1b	69	65.154	ENSHCOG00000000918	larp1b	85	64.830	Hippocampus_comes
ENSELUG00000023774	larp1b	99	55.752	ENSIPUG00000012138	larp1b	75	61.850	Ictalurus_punctatus
ENSELUG00000023774	larp1b	99	56.401	ENSKMAG00000011589	larp1b	77	63.636	Kryptolebias_marmoratus
ENSELUG00000023774	larp1b	99	58.586	ENSLBEG00000005655	larp1b	76	62.952	Labrus_bergylta
ENSELUG00000023774	larp1b	95	48.928	ENSLACG00000015247	LARP1B	62	60.323	Latimeria_chalumnae
ENSELUG00000023774	larp1b	85	58.059	ENSLOCG00000010684	larp1b	69	57.483	Lepisosteus_oculatus
ENSELUG00000023774	larp1b	72	53.939	ENSMFAG00000002218	LARP1B	70	53.939	Macaca_fascicularis
ENSELUG00000023774	larp1b	72	53.636	ENSMMUG00000021347	LARP1B	70	53.636	Macaca_mulatta
ENSELUG00000023774	larp1b	80	45.260	ENSMNEG00000030406	LARP1B	74	52.987	Macaca_nemestrina
ENSELUG00000023774	larp1b	77	52.595	ENSMLEG00000009306	LARP1B	71	53.636	Mandrillus_leucophaeus
ENSELUG00000023774	larp1b	99	59.720	ENSMAMG00000000081	larp1b	88	53.506	Mastacembelus_armatus
ENSELUG00000023774	larp1b	70	66.186	ENSMZEG00005002545	larp1b	82	61.557	Maylandia_zebra
ENSELUG00000023774	larp1b	78	47.461	ENSMGAG00000004809	LARP1B	67	52.427	Meleagris_gallopavo
ENSELUG00000023774	larp1b	79	48.759	ENSMICG00000036111	LARP1B	69	54.947	Microcebus_murinus
ENSELUG00000023774	larp1b	73	73.743	ENSMODG00000012300	LARP1B	55	55.210	Monodelphis_domestica
ENSELUG00000023774	larp1b	99	58.838	ENSMALG00000003638	larp1b	88	52.948	Monopterus_albus
ENSELUG00000023774	larp1b	83	48.656	ENSMPUG00000017365	LARP1B	55	56.757	Mustela_putorius_furo
ENSELUG00000023774	larp1b	78	53.113	ENSMLUG00000010229	LARP1B	69	53.765	Myotis_lucifugus
ENSELUG00000023774	larp1b	96	54.556	ENSNBRG00000023846	larp1b	87	53.909	Neolamprologus_brichardi
ENSELUG00000023774	larp1b	68	72.222	ENSNLEG00000013819	LARP1B	60	72.222	Nomascus_leucogenys
ENSELUG00000023774	larp1b	62	73.743	ENSMEUG00000010308	LARP1B	55	73.743	Notamacropus_eugenii
ENSELUG00000023774	larp1b	77	47.486	ENSOPRG00000005478	LARP1B	70	49.317	Ochotona_princeps
ENSELUG00000023774	larp1b	80	60.268	ENSONIG00000012386	larp1b	74	59.866	Oreochromis_niloticus
ENSELUG00000023774	larp1b	77	53.627	ENSOCUG00000013330	LARP1B	68	54.364	Oryctolagus_cuniculus
ENSELUG00000023774	larp1b	93	63.434	ENSORLG00000017954	larp1b	88	53.413	Oryzias_latipes
ENSELUG00000023774	larp1b	93	63.306	ENSORLG00020013081	larp1b	78	60.054	Oryzias_latipes_hni
ENSELUG00000023774	larp1b	93	64.659	ENSORLG00015009580	larp1b	88	53.796	Oryzias_latipes_hsok
ENSELUG00000023774	larp1b	93	64.718	ENSOMEG00000004210	larp1b	75	62.044	Oryzias_melastigma
ENSELUG00000023774	larp1b	72	56.221	ENSOGAG00000005771	LARP1B	71	55.914	Otolemur_garnettii
ENSELUG00000023774	larp1b	73	73.743	ENSOARG00000015300	LARP1B	70	52.161	Ovis_aries
ENSELUG00000023774	larp1b	72	52.799	ENSPPAG00000030439	LARP1B	70	52.648	Pan_paniscus
ENSELUG00000023774	larp1b	64	47.048	ENSPPRG00000002743	-	63	57.471	Panthera_pardus
ENSELUG00000023774	larp1b	64	47.048	ENSPTIG00000011225	LARP1B	63	57.471	Panthera_tigris_altaica
ENSELUG00000023774	larp1b	72	52.799	ENSPTRG00000016437	LARP1B	70	52.648	Pan_troglodytes
ENSELUG00000023774	larp1b	72	53.636	ENSPANG00000012488	LARP1B	70	53.636	Papio_anubis
ENSELUG00000023774	larp1b	87	45.857	ENSPKIG00000014360	larp1b	66	55.008	Paramormyrops_kingsleyae
ENSELUG00000023774	larp1b	88	48.541	ENSPSIG00000012885	LARP1B	65	57.662	Pelodiscus_sinensis
ENSELUG00000023774	larp1b	77	62.682	ENSPMGG00000007207	larp1b	79	62.682	Periophthalmus_magnuspinnatus
ENSELUG00000023774	larp1b	69	49.623	ENSPMAG00000002700	larp1b	67	49.321	Petromyzon_marinus
ENSELUG00000023774	larp1b	77	52.083	ENSPCIG00000026516	LARP1B	80	56.625	Phascolarctos_cinereus
ENSELUG00000023774	larp1b	56	65.000	ENSPFOG00000022837	-	74	61.290	Poecilia_formosa
ENSELUG00000023774	larp1b	86	63.582	ENSPFOG00000019519	larp1b	73	61.290	Poecilia_formosa
ENSELUG00000023774	larp1b	86	65.736	ENSPLAG00000007115	larp1b	72	63.517	Poecilia_latipinna
ENSELUG00000023774	larp1b	93	64.741	ENSPMEG00000001224	larp1b	88	53.105	Poecilia_mexicana
ENSELUG00000023774	larp1b	68	73.184	ENSPCAG00000007546	LARP1B	60	73.184	Procavia_capensis
ENSELUG00000023774	larp1b	68	65.854	ENSPCOG00000021874	LARP1B	54	75.862	Propithecus_coquereli
ENSELUG00000023774	larp1b	75	54.731	ENSPVAG00000005373	LARP1B	67	56.709	Pteropus_vampyrus
ENSELUG00000023774	larp1b	70	65.156	ENSPNYG00000017357	larp1b	77	65.000	Pundamilia_nyererei
ENSELUG00000023774	larp1b	90	57.525	ENSPNAG00000008823	larp1b	65	62.190	Pygocentrus_nattereri
ENSELUG00000023774	larp1b	64	46.369	ENSRBIG00000039982	-	66	55.840	Rhinopithecus_bieti
ENSELUG00000023774	larp1b	72	54.091	ENSRROG00000030771	LARP1B	70	54.091	Rhinopithecus_roxellana
ENSELUG00000023774	larp1b	80	46.011	ENSSHAG00000014474	LARP1B	71	52.362	Sarcophilus_harrisii
ENSELUG00000023774	larp1b	83	63.956	ENSSMAG00000006347	larp1b	72	60.924	Scophthalmus_maximus
ENSELUG00000023774	larp1b	99	59.320	ENSSDUG00000004182	larp1b	87	52.500	Seriola_dumerili
ENSELUG00000023774	larp1b	81	71.508	ENSSLDG00000014613	larp1b	74	71.839	Seriola_lalandi_dorsalis
ENSELUG00000023774	larp1b	69	54.812	ENSSPUG00000011837	LARP1B	68	54.649	Sphenodon_punctatus
ENSELUG00000023774	larp1b	94	61.064	ENSSPAG00000017772	larp1b	76	60.304	Stegastes_partitus
ENSELUG00000023774	larp1b	67	76.667	ENSSSCG00000034280	LARP1B	71	65.741	Sus_scrofa
ENSELUG00000023774	larp1b	69	55.392	ENSTGUG00000002098	-	71	55.302	Taeniopygia_guttata
ENSELUG00000023774	larp1b	99	59.079	ENSTRUG00000005612	larp1b	88	51.792	Takifugu_rubripes
ENSELUG00000023774	larp1b	91	61.064	ENSTNIG00000012398	larp1b	74	64.725	Tetraodon_nigroviridis
ENSELUG00000023774	larp1b	63	73.239	ENSTTRG00000012984	LARP1B	55	74.615	Tursiops_truncatus
ENSELUG00000023774	larp1b	77	52.883	ENSUMAG00000007373	LARP1B	68	54.700	Ursus_maritimus
ENSELUG00000023774	larp1b	64	73.864	ENSVPAG00000007223	LARP1B	63	73.864	Vicugna_pacos
ENSELUG00000023774	larp1b	79	48.971	ENSVVUG00000011307	LARP1B	75	54.074	Vulpes_vulpes
ENSELUG00000023774	larp1b	90	43.733	ENSXETG00000022512	larp1b	60	54.313	Xenopus_tropicalis
ENSELUG00000023774	larp1b	99	51.826	ENSXCOG00000004435	larp1b	86	52.204	Xiphophorus_couchianus
ENSELUG00000023774	larp1b	99	55.379	ENSXMAG00000008150	larp1b	77	61.592	Xiphophorus_maculatus