EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000023867 (Gene tree)
Gene ID: 105008961
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC105008961
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 9613 bases
Position: chrAZJR03000039.1:507213-516825
Accession: 105008961
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000025162	zf-C2H2_jaz	PF12171.8	3.2e-06	1	1
ENSELUP00000042565	zf-C2H2_jaz	PF12171.8	4.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000036788	-	1104	-	ENSELUP00000025162	367 (aa)	-	-
ENSELUT00000036764	-	2286	XM_010868337	ENSELUP00000042565	761 (aa)	XP_010866639	UPI000577D486

Gene Model

Click here to download ENSELUG00000023867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000023867's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000023867	-	71	49.827	ENSELUG00000014004	ciz1a	77	41.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000023867	-	78	44.898	ENSG00000148337	CIZ1	91	41.924	Homo_sapiens
ENSELUG00000023867	-	76	43.206	ENSACLG00000008591	-	70	42.368	Astatotilapia_calliptera
ENSELUG00000023867	-	78	31.644	ENSACLG00000011341	ciz1a	83	32.263	Astatotilapia_calliptera
ENSELUG00000023867	-	78	47.440	ENSCAFG00020016118	CIZ1	57	42.400	Canis_lupus_dingo
ENSELUG00000023867	-	78	45.392	ENSCATG00000034742	CIZ1	51	44.277	Cercocebus_atys
ENSELUG00000023867	-	78	40.000	ENSETEG00000005455	CIZ1	51	36.979	Echinops_telfairi
ENSELUG00000023867	-	76	44.912	ENSFHEG00000009254	-	64	43.377	Fundulus_heteroclitus
ENSELUG00000023867	-	62	43.103	ENSGMOG00000018734	-	91	46.250	Gadus_morhua
ENSELUG00000023867	-	57	53.425	ENSGALG00000042325	-	65	38.065	Gallus_gallus
ENSELUG00000023867	-	62	45.957	ENSGACG00000016651	-	58	47.222	Gasterosteus_aculeatus
ENSELUG00000023867	-	78	31.346	ENSHBUG00000022629	ciz1a	83	32.110	Haplochromis_burtoni
ENSELUG00000023867	-	83	41.270	ENSHBUG00000021945	-	70	42.991	Haplochromis_burtoni
ENSELUG00000023867	-	76	46.071	ENSKMAG00000006597	-	68	45.277	Kryptolebias_marmoratus
ENSELUG00000023867	-	76	44.781	ENSLBEG00000007927	-	66	44.136	Labrus_bergylta
ENSELUG00000023867	-	76	44.803	ENSMAMG00000019077	-	72	42.809	Mastacembelus_armatus
ENSELUG00000023867	-	78	31.450	ENSMZEG00005019261	ciz1a	83	32.061	Maylandia_zebra
ENSELUG00000023867	-	76	43.206	ENSMZEG00005000299	-	70	42.368	Maylandia_zebra
ENSELUG00000023867	-	55	53.302	ENSMGAG00000004067	-	95	52.586	Meleagris_gallopavo
ENSELUG00000023867	-	78	44.667	MGP_CAROLIEiJ_G0023430	Ciz1	86	48.293	Mus_caroli
ENSELUG00000023867	-	78	44.702	ENSMUSG00000039205	Ciz1	86	48.309	Mus_musculus
ENSELUG00000023867	-	78	44.040	MGP_PahariEiJ_G0024887	Ciz1	90	46.119	Mus_pahari
ENSELUG00000023867	-	78	44.518	MGP_SPRETEiJ_G0024347	Ciz1	86	48.020	Mus_spretus
ENSELUG00000023867	-	52	31.466	ENSONIG00000002850	ciz1a	81	31.681	Oreochromis_niloticus
ENSELUG00000023867	-	76	46.953	ENSORLG00000027096	-	68	44.518	Oryzias_latipes
ENSELUG00000023867	-	62	42.259	ENSORLG00000007023	ciz1a	74	32.642	Oryzias_latipes
ENSELUG00000023867	-	62	43.515	ENSORLG00020019782	ciz1a	74	31.952	Oryzias_latipes_hni
ENSELUG00000023867	-	84	42.902	ENSORLG00015000909	-	85	42.271	Oryzias_latipes_hsok
ENSELUG00000023867	-	68	40.230	ENSORLG00015007811	ciz1a	74	32.465	Oryzias_latipes_hsok
ENSELUG00000023867	-	78	45.033	ENSPEMG00000002769	Ciz1	85	48.731	Peromyscus_maniculatus_bairdii
ENSELUG00000023867	-	66	40.486	ENSPFOG00000019847	ciz1a	67	42.857	Poecilia_formosa
ENSELUG00000023867	-	77	47.368	ENSPREG00000003135	-	70	44.444	Poecilia_reticulata
ENSELUG00000023867	-	52	32.366	ENSPNYG00000009489	ciz1a	88	30.499	Pundamilia_nyererei
ENSELUG00000023867	-	86	43.653	ENSPNAG00000013580	ciz1a	89	39.773	Pygocentrus_nattereri
ENSELUG00000023867	-	78	50.489	ENSSHAG00000018645	-	52	50.784	Sarcophilus_harrisii
ENSELUG00000023867	-	65	42.231	ENSSPAG00000019029	ciz1a	85	30.782	Stegastes_partitus
ENSELUG00000023867	-	65	42.231	ENSSPAG00000022167	ciz1a	85	30.782	Stegastes_partitus
ENSELUG00000023867	-	78	46.599	ENSSSCG00000005640	CIZ1	57	42.742	Sus_scrofa
ENSELUG00000023867	-	62	54.762	ENSTGUG00000003828	-	56	56.863	Taeniopygia_guttata
ENSELUG00000023867	-	78	45.151	ENSUAMG00000009953	CIZ1	52	41.579	Ursus_americanus
ENSELUG00000023867	-	76	45.390	ENSXMAG00000028127	-	70	42.271	Xiphophorus_maculatus