EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000023868 (Gene tree)
Gene ID: 105025975
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 38905 bases
Position: chrLG02:1549508-1588412
Accession: 105025975
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000025124	CPSF_A	PF03178.15	1e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000036748	-	4276	XM_010897087	ENSELUP00000025124	1139 (aa)	XP_010895389	UPI000576FC8A

Gene Model

Click here to download ENSELUG00000023868's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03420	Nucleotide excision repair	KEGG
els04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000023868's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000023868	ddb1	100	91.140	ENSG00000167986	DDB1	100	96.575	Homo_sapiens
ENSELUG00000023868	ddb1	98	97.217	ENSAPOG00000005036	ddb1	99	97.245	Acanthochromis_polyacanthus
ENSELUG00000023868	ddb1	100	91.228	ENSAMEG00000016518	DDB1	100	91.228	Ailuropoda_melanoleuca
ENSELUG00000023868	ddb1	86	96.939	ENSACIG00000020624	ddb1	99	96.939	Amphilophus_citrinellus
ENSELUG00000023868	ddb1	100	97.281	ENSAOCG00000003066	ddb1	100	97.281	Amphiprion_ocellaris
ENSELUG00000023868	ddb1	100	97.281	ENSAPEG00000000092	ddb1	100	97.281	Amphiprion_percula
ENSELUG00000023868	ddb1	94	97.209	ENSATEG00000020571	ddb1	97	97.209	Anabas_testudineus
ENSELUG00000023868	ddb1	99	89.558	ENSAPLG00000007174	DDB1	99	89.558	Anas_platyrhynchos
ENSELUG00000023868	ddb1	100	90.614	ENSACAG00000017758	DDB1	100	90.614	Anolis_carolinensis
ENSELUG00000023868	ddb1	100	91.140	ENSANAG00000021878	DDB1	100	91.140	Aotus_nancymaae
ENSELUG00000023868	ddb1	100	97.018	ENSACLG00000012401	ddb1	100	97.018	Astatotilapia_calliptera
ENSELUG00000023868	ddb1	100	91.140	ENSBTAG00000021569	DDB1	93	91.140	Bos_taurus
ENSELUG00000023868	ddb1	100	37.297	WBGene00010890	ddb-1	100	37.297	Caenorhabditis_elegans
ENSELUG00000023868	ddb1	100	91.140	ENSCJAG00000019319	DDB1	100	91.140	Callithrix_jacchus
ENSELUG00000023868	ddb1	100	91.228	ENSCAFG00000016264	DDB1	100	91.228	Canis_familiaris
ENSELUG00000023868	ddb1	94	91.535	ENSCAFG00020012722	DDB1	99	91.535	Canis_lupus_dingo
ENSELUG00000023868	ddb1	100	91.140	ENSCHIG00000014969	DDB1	100	91.140	Capra_hircus
ENSELUG00000023868	ddb1	100	90.614	ENSTSYG00000008027	DDB1	100	90.614	Carlito_syrichta
ENSELUG00000023868	ddb1	98	91.063	ENSCAPG00000010786	DDB1	100	91.063	Cavia_aperea
ENSELUG00000023868	ddb1	100	91.053	ENSCPOG00000009956	DDB1	100	91.053	Cavia_porcellus
ENSELUG00000023868	ddb1	100	91.140	ENSCCAG00000035883	DDB1	100	91.140	Cebus_capucinus
ENSELUG00000023868	ddb1	100	88.715	ENSCATG00000044495	DDB1	100	88.715	Cercocebus_atys
ENSELUG00000023868	ddb1	100	91.140	ENSCLAG00000004126	DDB1	100	91.140	Chinchilla_lanigera
ENSELUG00000023868	ddb1	100	91.140	ENSCSAG00000006392	DDB1	100	91.140	Chlorocebus_sabaeus
ENSELUG00000023868	ddb1	88	84.470	ENSCHOG00000011377	DDB1	90	84.470	Choloepus_hoffmanni
ENSELUG00000023868	ddb1	60	30.939	ENSCHOG00000001878	SF3B3	57	30.939	Choloepus_hoffmanni
ENSELUG00000023868	ddb1	100	90.877	ENSCPBG00000017728	DDB1	100	90.877	Chrysemys_picta_bellii
ENSELUG00000023868	ddb1	100	61.285	ENSCING00000007437	-	100	61.285	Ciona_intestinalis
ENSELUG00000023868	ddb1	94	60.737	ENSCSAVG00000004783	-	100	60.737	Ciona_savignyi
ENSELUG00000023868	ddb1	100	91.140	ENSCANG00000019948	DDB1	100	91.140	Colobus_angolensis_palliatus
ENSELUG00000023868	ddb1	100	91.228	ENSCGRG00001016599	Ddb1	100	91.228	Cricetulus_griseus_chok1gshd
ENSELUG00000023868	ddb1	100	91.228	ENSCGRG00000013427	Ddb1	100	91.228	Cricetulus_griseus_crigri
ENSELUG00000023868	ddb1	93	96.607	ENSCSEG00000012499	ddb1	99	95.040	Cynoglossus_semilaevis
ENSELUG00000023868	ddb1	94	96.086	ENSCVAG00000019531	ddb1	99	96.086	Cyprinodon_variegatus
ENSELUG00000023868	ddb1	100	93.013	ENSDARG00000074431	ddb1	100	93.013	Danio_rerio
ENSELUG00000023868	ddb1	94	91.535	ENSDNOG00000014884	DDB1	97	91.535	Dasypus_novemcinctus
ENSELUG00000023868	ddb1	84	95.455	ENSDORG00000000127	Ddb1	100	95.455	Dipodomys_ordii
ENSELUG00000023868	ddb1	100	60.437	FBgn0260962	pic	100	60.437	Drosophila_melanogaster
ENSELUG00000023868	ddb1	71	95.276	ENSETEG00000001053	-	71	95.276	Echinops_telfairi
ENSELUG00000023868	ddb1	78	83.802	ENSEBUG00000014593	ddb1	97	83.802	Eptatretus_burgeri
ENSELUG00000023868	ddb1	100	91.140	ENSEASG00005008184	DDB1	100	91.140	Equus_asinus_asinus
ENSELUG00000023868	ddb1	100	91.228	ENSECAG00000012136	DDB1	100	91.228	Equus_caballus
ENSELUG00000023868	ddb1	85	87.542	ENSEEUG00000003194	DDB1	85	87.542	Erinaceus_europaeus
ENSELUG00000023868	ddb1	100	91.228	ENSFCAG00000029716	DDB1	100	91.228	Felis_catus
ENSELUG00000023868	ddb1	100	90.201	ENSFALG00000011981	DDB1	100	90.201	Ficedula_albicollis
ENSELUG00000023868	ddb1	100	91.140	ENSFDAG00000005128	DDB1	100	91.140	Fukomys_damarensis
ENSELUG00000023868	ddb1	90	94.902	ENSFHEG00000022133	ddb1	99	94.902	Fundulus_heteroclitus
ENSELUG00000023868	ddb1	79	98.328	ENSGMOG00000019386	ddb1	94	98.328	Gadus_morhua
ENSELUG00000023868	ddb1	100	90.702	ENSGALG00000042333	DDB1	100	90.702	Gallus_gallus
ENSELUG00000023868	ddb1	94	96.552	ENSGAFG00000013142	ddb1	99	96.552	Gambusia_affinis
ENSELUG00000023868	ddb1	96	95.600	ENSGACG00000017182	ddb1	100	95.600	Gasterosteus_aculeatus
ENSELUG00000023868	ddb1	95	90.683	ENSGAGG00000014124	DDB1	100	90.683	Gopherus_agassizii
ENSELUG00000023868	ddb1	100	91.140	ENSGGOG00000004052	DDB1	100	91.140	Gorilla_gorilla
ENSELUG00000023868	ddb1	100	97.018	ENSHBUG00000008873	ddb1	100	97.018	Haplochromis_burtoni
ENSELUG00000023868	ddb1	100	91.053	ENSHGLG00000018430	DDB1	100	91.053	Heterocephalus_glaber_female
ENSELUG00000023868	ddb1	100	90.088	ENSHGLG00100014475	DDB1	100	90.088	Heterocephalus_glaber_male
ENSELUG00000023868	ddb1	94	96.283	ENSHCOG00000018670	ddb1	98	96.283	Hippocampus_comes
ENSELUG00000023868	ddb1	100	95.965	ENSIPUG00000005612	DDB1	100	95.965	Ictalurus_punctatus
ENSELUG00000023868	ddb1	100	91.140	ENSSTOG00000007552	DDB1	100	91.140	Ictidomys_tridecemlineatus
ENSELUG00000023868	ddb1	100	91.053	ENSJJAG00000017769	Ddb1	100	91.053	Jaculus_jaculus
ENSELUG00000023868	ddb1	94	96.365	ENSKMAG00000002315	ddb1	99	96.365	Kryptolebias_marmoratus
ENSELUG00000023868	ddb1	84	97.294	ENSLBEG00000017065	ddb1	99	97.294	Labrus_bergylta
ENSELUG00000023868	ddb1	100	90.193	ENSLACG00000017611	DDB1	100	90.193	Latimeria_chalumnae
ENSELUG00000023868	ddb1	92	87.784	ENSLOCG00000000012	ddb1	100	87.784	Lepisosteus_oculatus
ENSELUG00000023868	ddb1	100	91.053	ENSLAFG00000011513	DDB1	100	91.053	Loxodonta_africana
ENSELUG00000023868	ddb1	100	91.140	ENSMFAG00000042035	DDB1	100	91.140	Macaca_fascicularis
ENSELUG00000023868	ddb1	99	91.158	ENSMMUG00000002691	DDB1	99	91.158	Macaca_mulatta
ENSELUG00000023868	ddb1	100	91.140	ENSMNEG00000031559	DDB1	100	91.140	Macaca_nemestrina
ENSELUG00000023868	ddb1	100	91.140	ENSMLEG00000044136	DDB1	100	91.140	Mandrillus_leucophaeus
ENSELUG00000023868	ddb1	100	97.807	ENSMAMG00000014372	ddb1	100	97.807	Mastacembelus_armatus
ENSELUG00000023868	ddb1	100	96.930	ENSMZEG00005013835	ddb1	100	96.930	Maylandia_zebra
ENSELUG00000023868	ddb1	94	89.944	ENSMGAG00000004990	DDB1	100	89.944	Meleagris_gallopavo
ENSELUG00000023868	ddb1	100	91.228	ENSMAUG00000012926	Ddb1	100	91.228	Mesocricetus_auratus
ENSELUG00000023868	ddb1	100	91.316	ENSMICG00000013703	DDB1	100	91.316	Microcebus_murinus
ENSELUG00000023868	ddb1	100	91.140	ENSMOCG00000020499	Ddb1	100	91.140	Microtus_ochrogaster
ENSELUG00000023868	ddb1	86	97.653	ENSMMOG00000001758	ddb1	99	97.653	Mola_mola
ENSELUG00000023868	ddb1	100	82.180	ENSMODG00000020353	DDB1	100	82.180	Monodelphis_domestica
ENSELUG00000023868	ddb1	100	97.893	ENSMALG00000014071	ddb1	100	97.893	Monopterus_albus
ENSELUG00000023868	ddb1	100	91.228	MGP_CAROLIEiJ_G0022695	Ddb1	100	91.228	Mus_caroli
ENSELUG00000023868	ddb1	100	91.316	ENSMUSG00000024740	Ddb1	100	91.316	Mus_musculus
ENSELUG00000023868	ddb1	100	91.228	MGP_PahariEiJ_G0014189	Ddb1	100	91.228	Mus_pahari
ENSELUG00000023868	ddb1	100	91.316	MGP_SPRETEiJ_G0023609	Ddb1	100	91.316	Mus_spretus
ENSELUG00000023868	ddb1	100	88.158	ENSMPUG00000014200	DDB1	100	88.158	Mustela_putorius_furo
ENSELUG00000023868	ddb1	100	91.140	ENSMLUG00000013232	DDB1	100	91.140	Myotis_lucifugus
ENSELUG00000023868	ddb1	100	91.053	ENSNGAG00000009384	Ddb1	100	91.053	Nannospalax_galili
ENSELUG00000023868	ddb1	100	97.105	ENSNBRG00000019581	ddb1	100	97.105	Neolamprologus_brichardi
ENSELUG00000023868	ddb1	100	88.281	ENSNLEG00000002022	DDB1	100	88.281	Nomascus_leucogenys
ENSELUG00000023868	ddb1	82	30.462	ENSMEUG00000004479	SF3B3	82	30.462	Notamacropus_eugenii
ENSELUG00000023868	ddb1	90	92.606	ENSMEUG00000001099	DDB1	93	92.606	Notamacropus_eugenii
ENSELUG00000023868	ddb1	90	82.638	ENSOPRG00000008254	DDB1	90	82.638	Ochotona_princeps
ENSELUG00000023868	ddb1	100	91.228	ENSODEG00000002419	DDB1	100	91.228	Octodon_degus
ENSELUG00000023868	ddb1	100	96.930	ENSONIG00000005804	ddb1	100	96.930	Oreochromis_niloticus
ENSELUG00000023868	ddb1	91	90.988	ENSOANG00000004897	DDB1	100	90.988	Ornithorhynchus_anatinus
ENSELUG00000023868	ddb1	100	91.140	ENSOCUG00000001667	DDB1	100	91.140	Oryctolagus_cuniculus
ENSELUG00000023868	ddb1	94	96.000	ENSORLG00000001399	ddb1	99	95.175	Oryzias_latipes
ENSELUG00000023868	ddb1	94	95.907	ENSORLG00020001277	ddb1	96	95.907	Oryzias_latipes_hni
ENSELUG00000023868	ddb1	94	96.000	ENSORLG00015002080	ddb1	99	96.000	Oryzias_latipes_hsok
ENSELUG00000023868	ddb1	96	94.531	ENSOMEG00000006181	ddb1	99	94.531	Oryzias_melastigma
ENSELUG00000023868	ddb1	100	91.316	ENSOGAG00000016103	DDB1	100	91.316	Otolemur_garnettii
ENSELUG00000023868	ddb1	99	91.362	ENSOARG00000011716	DDB1	98	91.362	Ovis_aries
ENSELUG00000023868	ddb1	100	91.140	ENSPPAG00000035343	DDB1	100	91.140	Pan_paniscus
ENSELUG00000023868	ddb1	100	91.228	ENSPPRG00000013300	DDB1	100	91.228	Panthera_pardus
ENSELUG00000023868	ddb1	98	91.242	ENSPTIG00000006909	DDB1	98	91.242	Panthera_tigris_altaica
ENSELUG00000023868	ddb1	100	91.140	ENSPTRG00000003737	DDB1	100	91.140	Pan_troglodytes
ENSELUG00000023868	ddb1	100	91.140	ENSPANG00000000242	DDB1	100	91.140	Papio_anubis
ENSELUG00000023868	ddb1	94	96.082	ENSPKIG00000019213	ddb1	94	96.082	Paramormyrops_kingsleyae
ENSELUG00000023868	ddb1	98	90.302	ENSPSIG00000013275	DDB1	100	90.302	Pelodiscus_sinensis
ENSELUG00000023868	ddb1	86	97.449	ENSPMGG00000021179	ddb1	99	97.449	Periophthalmus_magnuspinnatus
ENSELUG00000023868	ddb1	100	91.228	ENSPEMG00000012241	Ddb1	100	91.228	Peromyscus_maniculatus_bairdii
ENSELUG00000023868	ddb1	89	85.953	ENSPMAG00000008479	ddb1	100	85.953	Petromyzon_marinus
ENSELUG00000023868	ddb1	100	91.316	ENSPCIG00000002643	DDB1	100	91.316	Phascolarctos_cinereus
ENSELUG00000023868	ddb1	100	96.494	ENSPFOG00000002768	ddb1	100	96.494	Poecilia_formosa
ENSELUG00000023868	ddb1	100	96.316	ENSPLAG00000017227	ddb1	100	96.316	Poecilia_latipinna
ENSELUG00000023868	ddb1	100	96.316	ENSPMEG00000011398	ddb1	100	96.316	Poecilia_mexicana
ENSELUG00000023868	ddb1	94	96.558	ENSPREG00000004440	ddb1	98	96.558	Poecilia_reticulata
ENSELUG00000023868	ddb1	100	86.900	ENSPPYG00000003193	DDB1	100	86.900	Pongo_abelii
ENSELUG00000023868	ddb1	85	89.104	ENSPCAG00000011040	DDB1	85	89.104	Procavia_capensis
ENSELUG00000023868	ddb1	100	90.105	ENSPCOG00000015176	DDB1	100	90.105	Propithecus_coquereli
ENSELUG00000023868	ddb1	55	34.234	ENSPCOG00000026582	SF3B3	63	34.234	Propithecus_coquereli
ENSELUG00000023868	ddb1	100	91.053	ENSPVAG00000003847	DDB1	100	91.053	Pteropus_vampyrus
ENSELUG00000023868	ddb1	94	96.552	ENSPNAG00000006635	ddb1	97	96.552	Pygocentrus_nattereri
ENSELUG00000023868	ddb1	100	91.316	ENSRNOG00000020715	Ddb1	100	91.316	Rattus_norvegicus
ENSELUG00000023868	ddb1	100	91.140	ENSRBIG00000033611	DDB1	100	91.140	Rhinopithecus_bieti
ENSELUG00000023868	ddb1	100	91.140	ENSRROG00000041407	DDB1	100	91.140	Rhinopithecus_roxellana
ENSELUG00000023868	ddb1	100	91.053	ENSSBOG00000019775	DDB1	100	91.053	Saimiri_boliviensis_boliviensis
ENSELUG00000023868	ddb1	94	88.879	ENSSHAG00000011600	DDB1	100	88.879	Sarcophilus_harrisii
ENSELUG00000023868	ddb1	94	96.000	ENSSFOG00015011151	ddb1	97	96.000	Scleropages_formosus
ENSELUG00000023868	ddb1	100	97.105	ENSSMAG00000009495	ddb1	100	97.105	Scophthalmus_maximus
ENSELUG00000023868	ddb1	100	97.544	ENSSDUG00000004642	ddb1	100	97.544	Seriola_dumerili
ENSELUG00000023868	ddb1	100	97.544	ENSSLDG00000015804	ddb1	100	97.544	Seriola_lalandi_dorsalis
ENSELUG00000023868	ddb1	70	94.340	ENSSARG00000003290	-	72	94.340	Sorex_araneus
ENSELUG00000023868	ddb1	100	90.789	ENSSPUG00000019338	DDB1	100	90.789	Sphenodon_punctatus
ENSELUG00000023868	ddb1	94	97.209	ENSSPAG00000009888	ddb1	99	97.209	Stegastes_partitus
ENSELUG00000023868	ddb1	100	90.175	ENSSSCG00000013094	DDB1	100	90.175	Sus_scrofa
ENSELUG00000023868	ddb1	100	90.263	ENSTGUG00000006414	DDB1	100	90.263	Taeniopygia_guttata
ENSELUG00000023868	ddb1	94	95.620	ENSTRUG00000016682	ddb1	98	95.620	Takifugu_rubripes
ENSELUG00000023868	ddb1	88	90.619	ENSTNIG00000009565	ddb1	99	90.619	Tetraodon_nigroviridis
ENSELUG00000023868	ddb1	92	85.509	ENSTTRG00000011055	DDB1	94	85.509	Tursiops_truncatus
ENSELUG00000023868	ddb1	94	91.535	ENSUAMG00000017793	DDB1	93	91.535	Ursus_americanus
ENSELUG00000023868	ddb1	94	91.535	ENSUMAG00000011788	DDB1	98	91.535	Ursus_maritimus
ENSELUG00000023868	ddb1	90	86.782	ENSVPAG00000007963	DDB1	92	86.782	Vicugna_pacos
ENSELUG00000023868	ddb1	100	91.228	ENSVVUG00000004987	DDB1	100	91.228	Vulpes_vulpes
ENSELUG00000023868	ddb1	100	88.199	ENSXETG00000008820	ddb1	100	88.199	Xenopus_tropicalis
ENSELUG00000023868	ddb1	86	96.735	ENSXCOG00000013956	ddb1	99	96.735	Xiphophorus_couchianus
ENSELUG00000023868	ddb1	94	96.552	ENSXMAG00000000022	ddb1	99	96.552	Xiphophorus_maculatus