EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000023883 (Gene tree)
Gene ID: 105022326
Gene Symbol: scrt2
Alias: fc69h09|wu:fc69h09|zgc:162551
Full Name: transcriptional repressor scratch 2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 9946 bases
Position: chrLG12:11430005-11439950
Accession: 105022326
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000042588	zf-C2H2	PF00096.26	1.1e-26	1	5
ENSELUP00000042588	zf-C2H2	PF00096.26	1.1e-26	2	5
ENSELUP00000042588	zf-C2H2	PF00096.26	1.1e-26	3	5
ENSELUP00000042588	zf-C2H2	PF00096.26	1.1e-26	4	5
ENSELUP00000042588	zf-C2H2	PF00096.26	1.1e-26	5	5
ENSELUP00000025193	zf-C2H2	PF00096.26	1.4e-26	1	5
ENSELUP00000025193	zf-C2H2	PF00096.26	1.4e-26	2	5
ENSELUP00000025193	zf-C2H2	PF00096.26	1.4e-26	3	5
ENSELUP00000025193	zf-C2H2	PF00096.26	1.4e-26	4	5
ENSELUP00000025193	zf-C2H2	PF00096.26	1.4e-26	5	5
ENSELUP00000042588	zf-met	PF12874.7	6.3e-09	1	1
ENSELUP00000025193	zf-met	PF12874.7	8.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000036842	-	5570	XM_010890598	ENSELUP00000025193	325 (aa)	XP_010888900	UPI000577E73E
ENSELUT00000036833	-	936	-	ENSELUP00000042588	311 (aa)	-	-

Gene Model

Click here to download ENSELUG00000023883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000023883's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000023883	scrt2	69	33.125	ENSELUG00000021560	-	56	37.778
ENSELUG00000023883	scrt2	96	65.705	ENSELUG00000022228	scrt1a	96	64.548
ENSELUG00000023883	scrt2	53	45.333	ENSELUG00000020211	znf236	70	32.593
ENSELUG00000023883	scrt2	57	35.714	ENSELUG00000001909	-	69	35.556
ENSELUG00000023883	scrt2	95	66.333	ENSELUG00000005435	scrt1b	96	66.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000023883	scrt2	100	88.650	ENSAPOG00000003680	scrt2	100	87.423	Acanthochromis_polyacanthus
ENSELUG00000023883	scrt2	96	66.667	ENSAPOG00000009279	scrt1b	97	67.333	Acanthochromis_polyacanthus
ENSELUG00000023883	scrt2	96	60.952	ENSAPOG00000015197	-	96	62.252	Acanthochromis_polyacanthus
ENSELUG00000023883	scrt2	97	81.848	ENSACIG00000012604	scrt2	98	80.528	Amphilophus_citrinellus
ENSELUG00000023883	scrt2	96	60.062	ENSACIG00000006586	-	96	61.290	Amphilophus_citrinellus
ENSELUG00000023883	scrt2	98	64.417	ENSACIG00000001296	-	98	62.963	Amphilophus_citrinellus
ENSELUG00000023883	scrt2	96	65.333	ENSACIG00000013613	scrt1b	97	65.667	Amphilophus_citrinellus
ENSELUG00000023883	scrt2	96	66.667	ENSAOCG00000003910	scrt1b	97	67.333	Amphiprion_ocellaris
ENSELUG00000023883	scrt2	96	60.062	ENSAOCG00000023304	-	96	61.290	Amphiprion_ocellaris
ENSELUG00000023883	scrt2	100	88.650	ENSAOCG00000021557	scrt2	100	87.423	Amphiprion_ocellaris
ENSELUG00000023883	scrt2	96	60.062	ENSAPEG00000005677	-	96	61.290	Amphiprion_percula
ENSELUG00000023883	scrt2	96	66.667	ENSAPEG00000000869	scrt1b	97	67.333	Amphiprion_percula
ENSELUG00000023883	scrt2	100	88.650	ENSAPEG00000022558	scrt2	100	87.423	Amphiprion_percula
ENSELUG00000023883	scrt2	98	62.617	ENSATEG00000003195	-	98	62.305	Anabas_testudineus
ENSELUG00000023883	scrt2	98	66.013	ENSATEG00000002302	scrt1b	97	65.667	Anabas_testudineus
ENSELUG00000023883	scrt2	96	60.635	ENSATEG00000011660	-	96	61.589	Anabas_testudineus
ENSELUG00000023883	scrt2	100	88.650	ENSATEG00000023998	scrt2	100	87.423	Anabas_testudineus
ENSELUG00000023883	scrt2	76	69.620	ENSACAG00000016109	SCRT2	96	68.163	Anolis_carolinensis
ENSELUG00000023883	scrt2	96	59.939	ENSACLG00000012046	-	96	60.510	Astatotilapia_calliptera
ENSELUG00000023883	scrt2	96	66.333	ENSACLG00000007162	scrt1b	97	66.333	Astatotilapia_calliptera
ENSELUG00000023883	scrt2	96	63.492	ENSAMXG00000042624	SCRT1	98	62.975	Astyanax_mexicanus
ENSELUG00000023883	scrt2	90	77.816	ENSAMXG00000034158	scrt2	97	76.792	Astyanax_mexicanus
ENSELUG00000023883	scrt2	95	66.554	ENSAMXG00000038085	scrt1a	97	64.241	Astyanax_mexicanus
ENSELUG00000023883	scrt2	96	63.578	ENSCPBG00000018899	SCRT1	97	64.217	Chrysemys_picta_bellii
ENSELUG00000023883	scrt2	87	59.155	ENSCPBG00000027613	SCRT2	100	59.507	Chrysemys_picta_bellii
ENSELUG00000023883	scrt2	56	90.826	ENSCGRG00000001380	Scrt2	63	90.826	Cricetulus_griseus_crigri
ENSELUG00000023883	scrt2	99	85.670	ENSCSEG00000021542	scrt2	99	84.735	Cynoglossus_semilaevis
ENSELUG00000023883	scrt2	98	65.033	ENSCSEG00000008596	scrt1b	97	64.356	Cynoglossus_semilaevis
ENSELUG00000023883	scrt2	96	60.062	ENSCSEG00000014892	-	96	60.323	Cynoglossus_semilaevis
ENSELUG00000023883	scrt2	96	60.991	ENSCVAG00000003190	-	96	63.226	Cyprinodon_variegatus
ENSELUG00000023883	scrt2	96	66.667	ENSCVAG00000009561	scrt1b	97	65.333	Cyprinodon_variegatus
ENSELUG00000023883	scrt2	100	87.730	ENSCVAG00000021038	scrt2	100	86.503	Cyprinodon_variegatus
ENSELUG00000023883	scrt2	95	67.003	ENSDARG00000040214	scrt1b	96	67.003	Danio_rerio
ENSELUG00000023883	scrt2	95	66.216	ENSDARG00000100821	scrt1a	96	64.548	Danio_rerio
ENSELUG00000023883	scrt2	81	64.822	ENSFALG00000005718	SCRT2	97	66.284	Ficedula_albicollis
ENSELUG00000023883	scrt2	96	66.667	ENSFHEG00000014820	scrt1b	97	66.667	Fundulus_heteroclitus
ENSELUG00000023883	scrt2	100	80.675	ENSFHEG00000005732	scrt2	98	81.188	Fundulus_heteroclitus
ENSELUG00000023883	scrt2	95	60.968	ENSFHEG00000009794	-	96	61.290	Fundulus_heteroclitus
ENSELUG00000023883	scrt2	98	64.262	ENSGMOG00000000629	scrt1b	97	65.886	Gadus_morhua
ENSELUG00000023883	scrt2	99	79.091	ENSGMOG00000019519	scrt2	99	78.182	Gadus_morhua
ENSELUG00000023883	scrt2	95	60.870	ENSGALG00000028912	SCRT2	96	61.204	Gallus_gallus
ENSELUG00000023883	scrt2	95	61.074	ENSGAFG00000009650	-	96	61.074	Gambusia_affinis
ENSELUG00000023883	scrt2	96	67.000	ENSGAFG00000007636	scrt1b	97	65.667	Gambusia_affinis
ENSELUG00000023883	scrt2	100	82.209	ENSGAFG00000003093	scrt2	100	80.982	Gambusia_affinis
ENSELUG00000023883	scrt2	96	64.765	ENSGACG00000008982	scrt1b	96	64.765	Gasterosteus_aculeatus
ENSELUG00000023883	scrt2	95	62.215	ENSGACG00000004072	-	96	62.215	Gasterosteus_aculeatus
ENSELUG00000023883	scrt2	98	62.783	ENSGAGG00000011736	SCRT1	98	62.300	Gopherus_agassizii
ENSELUG00000023883	scrt2	65	72.906	ENSGAGG00000020760	-	73	71.028	Gopherus_agassizii
ENSELUG00000023883	scrt2	99	59.133	ENSGAGG00000020761	SCRT2	97	62.126	Gopherus_agassizii
ENSELUG00000023883	scrt2	96	60.062	ENSHBUG00000019101	-	96	60.645	Haplochromis_burtoni
ENSELUG00000023883	scrt2	99	88.199	ENSHBUG00000012492	scrt2	99	86.957	Haplochromis_burtoni
ENSELUG00000023883	scrt2	96	66.333	ENSHBUG00000016621	scrt1b	97	66.333	Haplochromis_burtoni
ENSELUG00000023883	scrt2	97	84.818	ENSHCOG00000008116	scrt2	98	84.488	Hippocampus_comes
ENSELUG00000023883	scrt2	96	66.000	ENSHCOG00000016704	scrt1b	97	64.667	Hippocampus_comes
ENSELUG00000023883	scrt2	95	60.645	ENSHCOG00000016179	-	96	63.087	Hippocampus_comes
ENSELUG00000023883	scrt2	95	62.838	ENSIPUG00000005547	-	97	62.162	Ictalurus_punctatus
ENSELUG00000023883	scrt2	96	64.444	ENSIPUG00000004551	scrt1a	97	64.557	Ictalurus_punctatus
ENSELUG00000023883	scrt2	96	67.000	ENSKMAG00000005484	scrt1b	97	67.000	Kryptolebias_marmoratus
ENSELUG00000023883	scrt2	95	60.635	ENSKMAG00000009489	-	96	62.013	Kryptolebias_marmoratus
ENSELUG00000023883	scrt2	100	88.344	ENSKMAG00000018087	scrt2	100	87.117	Kryptolebias_marmoratus
ENSELUG00000023883	scrt2	100	88.957	ENSLBEG00000015419	scrt2	100	87.730	Labrus_bergylta
ENSELUG00000023883	scrt2	95	58.730	ENSLBEG00000023388	-	96	61.364	Labrus_bergylta
ENSELUG00000023883	scrt2	96	65.815	ENSLACG00000003588	SCRT1	96	66.554	Latimeria_chalumnae
ENSELUG00000023883	scrt2	96	66.773	ENSLOCG00000007573	scrt1b	96	66.892	Lepisosteus_oculatus
ENSELUG00000023883	scrt2	100	61.934	ENSLOCG00000002246	scrt2	100	61.702	Lepisosteus_oculatus
ENSELUG00000023883	scrt2	96	66.667	ENSMAMG00000011698	scrt1b	97	65.333	Mastacembelus_armatus
ENSELUG00000023883	scrt2	100	88.344	ENSMAMG00000001291	scrt2	100	87.423	Mastacembelus_armatus
ENSELUG00000023883	scrt2	96	60.062	ENSMZEG00005026702	-	96	60.645	Maylandia_zebra
ENSELUG00000023883	scrt2	96	66.333	ENSMZEG00005005627	scrt1b	97	66.333	Maylandia_zebra
ENSELUG00000023883	scrt2	99	88.199	ENSMZEG00005026445	scrt2	99	86.957	Maylandia_zebra
ENSELUG00000023883	scrt2	81	66.270	ENSMGAG00000016579	SCRT2	97	66.538	Meleagris_gallopavo
ENSELUG00000023883	scrt2	96	59.939	ENSMMOG00000018345	-	96	62.058	Mola_mola
ENSELUG00000023883	scrt2	96	65.667	ENSMMOG00000003327	scrt1b	97	66.333	Mola_mola
ENSELUG00000023883	scrt2	98	87.461	ENSMMOG00000009272	scrt2	99	86.335	Mola_mola
ENSELUG00000023883	scrt2	100	76.000	ENSMALG00000013656	scrt2	100	76.000	Monopterus_albus
ENSELUG00000023883	scrt2	96	67.333	ENSMALG00000012704	scrt1b	97	65.667	Monopterus_albus
ENSELUG00000023883	scrt2	96	66.113	ENSNBRG00000013983	scrt1b	97	66.113	Neolamprologus_brichardi
ENSELUG00000023883	scrt2	100	78.221	ENSNBRG00000007221	scrt2	98	79.208	Neolamprologus_brichardi
ENSELUG00000023883	scrt2	96	60.062	ENSNBRG00000014882	-	96	60.645	Neolamprologus_brichardi
ENSELUG00000023883	scrt2	96	66.333	ENSONIG00000006007	scrt1b	100	64.744	Oreochromis_niloticus
ENSELUG00000023883	scrt2	98	61.562	ENSONIG00000003152	-	99	60.000	Oreochromis_niloticus
ENSELUG00000023883	scrt2	96	59.509	ENSONIG00000019809	-	100	59.509	Oreochromis_niloticus
ENSELUG00000023883	scrt2	100	88.344	ENSONIG00000016758	scrt2	100	87.117	Oreochromis_niloticus
ENSELUG00000023883	scrt2	96	66.333	ENSORLG00000025651	scrt1b	97	65.000	Oryzias_latipes
ENSELUG00000023883	scrt2	95	59.875	ENSORLG00000022825	-	96	60.897	Oryzias_latipes
ENSELUG00000023883	scrt2	100	87.423	ENSORLG00000024051	scrt2	100	86.196	Oryzias_latipes
ENSELUG00000023883	scrt2	96	66.333	ENSORLG00020012967	scrt1b	97	65.000	Oryzias_latipes_hni
ENSELUG00000023883	scrt2	100	87.423	ENSORLG00020011478	scrt2	100	86.196	Oryzias_latipes_hni
ENSELUG00000023883	scrt2	100	87.423	ENSORLG00015005524	scrt2	100	86.196	Oryzias_latipes_hsok
ENSELUG00000023883	scrt2	96	66.333	ENSORLG00015019165	scrt1b	97	65.000	Oryzias_latipes_hsok
ENSELUG00000023883	scrt2	95	60.625	ENSORLG00015010104	-	96	61.981	Oryzias_latipes_hsok
ENSELUG00000023883	scrt2	95	60.952	ENSOMEG00000000286	-	96	61.688	Oryzias_melastigma
ENSELUG00000023883	scrt2	100	88.037	ENSOMEG00000002661	scrt2	100	87.730	Oryzias_melastigma
ENSELUG00000023883	scrt2	96	66.333	ENSOMEG00000003925	scrt1b	97	65.000	Oryzias_melastigma
ENSELUG00000023883	scrt2	95	66.216	ENSPKIG00000020085	scrt1a	96	66.554	Paramormyrops_kingsleyae
ENSELUG00000023883	scrt2	96	66.134	ENSPKIG00000022303	SCRT1	97	65.815	Paramormyrops_kingsleyae
ENSELUG00000023883	scrt2	96	66.555	ENSPMGG00000002260	scrt1b	97	64.238	Periophthalmus_magnuspinnatus
ENSELUG00000023883	scrt2	100	76.380	ENSPMGG00000016561	scrt2	100	76.380	Periophthalmus_magnuspinnatus
ENSELUG00000023883	scrt2	95	62.829	ENSPMGG00000021402	-	96	61.311	Periophthalmus_magnuspinnatus
ENSELUG00000023883	scrt2	100	88.037	ENSPFOG00000007738	scrt2	100	86.810	Poecilia_formosa
ENSELUG00000023883	scrt2	96	67.000	ENSPFOG00000017719	scrt1b	97	65.667	Poecilia_formosa
ENSELUG00000023883	scrt2	95	60.714	ENSPFOG00000005616	-	96	61.688	Poecilia_formosa
ENSELUG00000023883	scrt2	96	67.000	ENSPLAG00000009876	scrt1b	97	65.667	Poecilia_latipinna
ENSELUG00000023883	scrt2	95	60.714	ENSPLAG00000011718	-	96	61.688	Poecilia_latipinna
ENSELUG00000023883	scrt2	100	81.902	ENSPLAG00000005765	scrt2	98	82.838	Poecilia_latipinna
ENSELUG00000023883	scrt2	95	60.714	ENSPMEG00000011706	-	96	61.688	Poecilia_mexicana
ENSELUG00000023883	scrt2	96	67.000	ENSPMEG00000013274	scrt1b	97	65.667	Poecilia_mexicana
ENSELUG00000023883	scrt2	100	81.902	ENSPMEG00000001538	scrt2	98	82.838	Poecilia_mexicana
ENSELUG00000023883	scrt2	96	59.077	ENSPREG00000012166	-	96	61.688	Poecilia_reticulata
ENSELUG00000023883	scrt2	96	67.000	ENSPREG00000018985	scrt1b	97	65.667	Poecilia_reticulata
ENSELUG00000023883	scrt2	100	87.730	ENSPREG00000001147	scrt2	100	86.810	Poecilia_reticulata
ENSELUG00000023883	scrt2	96	66.333	ENSPNYG00000017733	scrt1b	97	66.333	Pundamilia_nyererei
ENSELUG00000023883	scrt2	96	60.062	ENSPNYG00000008865	-	96	60.645	Pundamilia_nyererei
ENSELUG00000023883	scrt2	97	80.858	ENSPNYG00000013109	scrt2	98	79.538	Pundamilia_nyererei
ENSELUG00000023883	scrt2	96	61.783	ENSPNAG00000027880	-	97	64.430	Pygocentrus_nattereri
ENSELUG00000023883	scrt2	95	66.554	ENSPNAG00000017415	scrt1a	96	66.216	Pygocentrus_nattereri
ENSELUG00000023883	scrt2	96	64.856	ENSSFOG00015001195	SCRT1	97	64.217	Scleropages_formosus
ENSELUG00000023883	scrt2	96	58.589	ENSSMAG00000005122	-	97	58.589	Scophthalmus_maximus
ENSELUG00000023883	scrt2	96	66.333	ENSSMAG00000019207	scrt1b	97	65.000	Scophthalmus_maximus
ENSELUG00000023883	scrt2	96	67.000	ENSSDUG00000007752	scrt1b	97	67.000	Seriola_dumerili
ENSELUG00000023883	scrt2	95	88.552	ENSSDUG00000001637	scrt2	95	87.205	Seriola_dumerili
ENSELUG00000023883	scrt2	96	59.752	ENSSDUG00000013215	-	96	61.290	Seriola_dumerili
ENSELUG00000023883	scrt2	96	59.752	ENSSLDG00000016454	-	96	61.290	Seriola_lalandi_dorsalis
ENSELUG00000023883	scrt2	100	88.344	ENSSLDG00000013565	scrt2	100	87.117	Seriola_lalandi_dorsalis
ENSELUG00000023883	scrt2	96	67.000	ENSSLDG00000017166	scrt1b	97	67.000	Seriola_lalandi_dorsalis
ENSELUG00000023883	scrt2	95	63.300	ENSSPUG00000018637	SCRT2	96	63.636	Sphenodon_punctatus
ENSELUG00000023883	scrt2	96	67.000	ENSSPAG00000002200	scrt1b	97	67.000	Stegastes_partitus
ENSELUG00000023883	scrt2	96	60.372	ENSSPAG00000006788	-	96	61.613	Stegastes_partitus
ENSELUG00000023883	scrt2	100	79.141	ENSSPAG00000014018	scrt2	98	80.198	Stegastes_partitus
ENSELUG00000023883	scrt2	81	64.683	ENSTGUG00000006801	SCRT2	99	66.154	Taeniopygia_guttata
ENSELUG00000023883	scrt2	95	65.657	ENSTRUG00000011637	scrt1b	97	65.993	Takifugu_rubripes
ENSELUG00000023883	scrt2	96	59.443	ENSTRUG00000012719	-	97	60.185	Takifugu_rubripes
ENSELUG00000023883	scrt2	86	61.397	ENSTRUG00000019558	-	83	62.271	Takifugu_rubripes
ENSELUG00000023883	scrt2	97	85.809	ENSTRUG00000007620	scrt2	98	84.488	Takifugu_rubripes
ENSELUG00000023883	scrt2	95	66.330	ENSTNIG00000018384	scrt1b	96	64.646	Tetraodon_nigroviridis
ENSELUG00000023883	scrt2	98	88.088	ENSTNIG00000012473	scrt2	99	86.025	Tetraodon_nigroviridis
ENSELUG00000023883	scrt2	96	67.000	ENSXCOG00000019675	scrt1b	97	65.667	Xiphophorus_couchianus
ENSELUG00000023883	scrt2	100	82.209	ENSXCOG00000014367	scrt2	100	80.982	Xiphophorus_couchianus
ENSELUG00000023883	scrt2	95	59.283	ENSXCOG00000019861	-	96	60.403	Xiphophorus_couchianus
ENSELUG00000023883	scrt2	100	87.730	ENSXMAG00000028567	scrt2	100	86.503	Xiphophorus_maculatus
ENSELUG00000023883	scrt2	95	60.714	ENSXMAG00000015353	-	96	61.364	Xiphophorus_maculatus
ENSELUG00000023883	scrt2	96	67.000	ENSXMAG00000027885	scrt1b	97	65.667	Xiphophorus_maculatus