EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000023973 (Gene tree)
Gene ID: 105011425
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 5644 bases
Position: chrLG08:9710896-9716539
Accession: 105011425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000042651	MMR_HSR1	PF01926.23	6.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000043484	-	1866	XM_010871429	ENSELUP00000042651	621 (aa)	XP_010869731	-

Gene Model

Click here to download ENSELUG00000023973's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000023973's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000023973	lsg1	65	31.409	ENSELUG00000006281	gnl1	65	31.935

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000023973	lsg1	99	62.651	ENSG00000041802	LSG1	98	72.414	Homo_sapiens
ENSELUG00000023973	lsg1	100	72.884	ENSAPOG00000009694	lsg1	100	73.511	Acanthochromis_polyacanthus
ENSELUG00000023973	lsg1	100	60.241	ENSAMEG00000009343	LSG1	100	60.241	Ailuropoda_melanoleuca
ENSELUG00000023973	lsg1	98	73.291	ENSACIG00000012406	lsg1	100	73.832	Amphilophus_citrinellus
ENSELUG00000023973	lsg1	100	73.406	ENSAOCG00000016066	lsg1	100	73.479	Amphiprion_ocellaris
ENSELUG00000023973	lsg1	100	73.635	ENSAPEG00000003252	lsg1	100	72.814	Amphiprion_percula
ENSELUG00000023973	lsg1	98	73.968	ENSATEG00000011794	lsg1	100	74.495	Anabas_testudineus
ENSELUG00000023973	lsg1	95	60.766	ENSACAG00000004222	LSG1	100	61.244	Anolis_carolinensis
ENSELUG00000023973	lsg1	99	61.573	ENSANAG00000021153	LSG1	99	61.573	Aotus_nancymaae
ENSELUG00000023973	lsg1	100	71.342	ENSACLG00000000520	lsg1	100	70.739	Astatotilapia_calliptera
ENSELUG00000023973	lsg1	100	71.385	ENSAMXG00000008271	lsg1	100	71.081	Astyanax_mexicanus
ENSELUG00000023973	lsg1	99	62.595	ENSBTAG00000008461	LSG1	99	62.901	Bos_taurus
ENSELUG00000023973	lsg1	76	42.437	WBGene00016907	C53H9.2	82	43.176	Caenorhabditis_elegans
ENSELUG00000023973	lsg1	99	61.422	ENSCJAG00000013962	LSG1	99	61.573	Callithrix_jacchus
ENSELUG00000023973	lsg1	95	61.927	ENSCAFG00000013445	LSG1	100	62.381	Canis_familiaris
ENSELUG00000023973	lsg1	100	60.994	ENSCAFG00020002216	LSG1	99	62.620	Canis_lupus_dingo
ENSELUG00000023973	lsg1	100	62.308	ENSCHIG00000015769	LSG1	100	62.308	Capra_hircus
ENSELUG00000023973	lsg1	99	61.631	ENSTSYG00000001447	LSG1	99	61.689	Carlito_syrichta
ENSELUG00000023973	lsg1	95	62.890	ENSCAPG00000009856	LSG1	99	62.397	Cavia_aperea
ENSELUG00000023973	lsg1	99	61.246	ENSCCAG00000035744	LSG1	99	61.246	Cebus_capucinus
ENSELUG00000023973	lsg1	99	62.689	ENSCATG00000042060	LSG1	99	62.387	Cercocebus_atys
ENSELUG00000023973	lsg1	99	62.594	ENSCSAG00000008796	LSG1	92	63.293	Chlorocebus_sabaeus
ENSELUG00000023973	lsg1	100	63.910	ENSCPBG00000015941	LSG1	83	64.458	Chrysemys_picta_bellii
ENSELUG00000023973	lsg1	83	48.762	ENSCING00000007079	-	100	48.762	Ciona_intestinalis
ENSELUG00000023973	lsg1	92	45.671	ENSCSAVG00000002514	-	100	49.328	Ciona_savignyi
ENSELUG00000023973	lsg1	99	62.387	ENSCANG00000030709	LSG1	99	62.991	Colobus_angolensis_palliatus
ENSELUG00000023973	lsg1	99	62.853	ENSCGRG00001019846	Lsg1	99	63.480	Cricetulus_griseus_chok1gshd
ENSELUG00000023973	lsg1	99	62.212	ENSCGRG00000014617	Lsg1	99	62.673	Cricetulus_griseus_crigri
ENSELUG00000023973	lsg1	98	72.057	ENSCSEG00000008522	lsg1	100	71.186	Cynoglossus_semilaevis
ENSELUG00000023973	lsg1	98	73.651	ENSCVAG00000002484	lsg1	100	72.601	Cyprinodon_variegatus
ENSELUG00000023973	lsg1	100	71.957	ENSDARG00000015352	lsg1	100	72.334	Danio_rerio
ENSELUG00000023973	lsg1	99	61.145	ENSDNOG00000006224	LSG1	99	61.212	Dasypus_novemcinctus
ENSELUG00000023973	lsg1	99	48.571	FBgn0266284	Ns3	99	48.571	Drosophila_melanogaster
ENSELUG00000023973	lsg1	87	68.000	ENSETEG00000003888	LSG1	89	68.000	Echinops_telfairi
ENSELUG00000023973	lsg1	88	54.844	ENSEBUG00000003119	lsg1	85	55.095	Eptatretus_burgeri
ENSELUG00000023973	lsg1	99	61.631	ENSEASG00005000678	LSG1	99	61.934	Equus_asinus_asinus
ENSELUG00000023973	lsg1	99	61.631	ENSECAG00000017659	LSG1	99	61.480	Equus_caballus
ENSELUG00000023973	lsg1	87	53.719	ENSEEUG00000015217	LSG1	87	53.719	Erinaceus_europaeus
ENSELUG00000023973	lsg1	100	60.784	ENSFCAG00000024957	LSG1	100	60.483	Felis_catus
ENSELUG00000023973	lsg1	92	60.806	ENSFALG00000007210	LSG1	94	61.389	Ficedula_albicollis
ENSELUG00000023973	lsg1	99	60.823	ENSFDAG00000017373	LSG1	99	61.883	Fukomys_damarensis
ENSELUG00000023973	lsg1	98	71.429	ENSFHEG00000003680	lsg1	100	71.517	Fundulus_heteroclitus
ENSELUG00000023973	lsg1	98	69.462	ENSGMOG00000015834	lsg1	100	69.646	Gadus_morhua
ENSELUG00000023973	lsg1	99	59.220	ENSGALG00000007058	LSG1	87	59.639	Gallus_gallus
ENSELUG00000023973	lsg1	98	73.871	ENSGAFG00000015831	lsg1	100	73.742	Gambusia_affinis
ENSELUG00000023973	lsg1	98	72.841	ENSGACG00000009323	lsg1	100	72.462	Gasterosteus_aculeatus
ENSELUG00000023973	lsg1	99	62.707	ENSGGOG00000000520	LSG1	99	62.236	Gorilla_gorilla
ENSELUG00000023973	lsg1	100	72.366	ENSHBUG00000005659	lsg1	100	72.366	Haplochromis_burtoni
ENSELUG00000023973	lsg1	99	61.622	ENSHGLG00000017390	LSG1	99	61.478	Heterocephalus_glaber_female
ENSELUG00000023973	lsg1	99	61.622	ENSHGLG00100018587	LSG1	99	61.478	Heterocephalus_glaber_male
ENSELUG00000023973	lsg1	98	72.152	ENSHCOG00000016848	lsg1	100	71.318	Hippocampus_comes
ENSELUG00000023973	lsg1	100	71.429	ENSIPUG00000008631	lsg1	100	71.205	Ictalurus_punctatus
ENSELUG00000023973	lsg1	75	57.200	ENSSTOG00000010234	LSG1	92	58.200	Ictidomys_tridecemlineatus
ENSELUG00000023973	lsg1	99	62.791	ENSJJAG00000015513	Lsg1	99	63.101	Jaculus_jaculus
ENSELUG00000023973	lsg1	98	73.744	ENSKMAG00000009681	lsg1	100	73.333	Kryptolebias_marmoratus
ENSELUG00000023973	lsg1	98	72.757	ENSLBEG00000024261	lsg1	100	71.860	Labrus_bergylta
ENSELUG00000023973	lsg1	100	64.286	ENSLACG00000013399	LSG1	100	64.583	Latimeria_chalumnae
ENSELUG00000023973	lsg1	98	68.955	ENSLOCG00000004918	lsg1	100	68.550	Lepisosteus_oculatus
ENSELUG00000023973	lsg1	99	61.941	ENSLAFG00000012919	-	99	61.787	Loxodonta_africana
ENSELUG00000023973	lsg1	99	62.594	ENSMFAG00000039903	LSG1	99	62.236	Macaca_fascicularis
ENSELUG00000023973	lsg1	99	62.594	ENSMMUG00000010708	LSG1	99	63.293	Macaca_mulatta
ENSELUG00000023973	lsg1	99	62.745	ENSMNEG00000031538	LSG1	99	62.538	Macaca_nemestrina
ENSELUG00000023973	lsg1	99	62.443	ENSMLEG00000041184	LSG1	99	63.142	Mandrillus_leucophaeus
ENSELUG00000023973	lsg1	100	72.756	ENSMAMG00000000470	lsg1	100	72.756	Mastacembelus_armatus
ENSELUG00000023973	lsg1	100	72.366	ENSMZEG00005017865	lsg1	100	72.366	Maylandia_zebra
ENSELUG00000023973	lsg1	88	60.702	ENSMGAG00000007050	LSG1	99	60.840	Meleagris_gallopavo
ENSELUG00000023973	lsg1	95	59.677	ENSMAUG00000016976	Lsg1	99	59.295	Mesocricetus_auratus
ENSELUG00000023973	lsg1	99	60.395	ENSMICG00000049087	LSG1	99	60.850	Microcebus_murinus
ENSELUG00000023973	lsg1	99	61.941	ENSMOCG00000022136	Lsg1	99	62.866	Microtus_ochrogaster
ENSELUG00000023973	lsg1	98	70.473	ENSMMOG00000008884	lsg1	100	70.288	Mola_mola
ENSELUG00000023973	lsg1	99	55.828	ENSMODG00000019828	LSG1	98	55.675	Monodelphis_domestica
ENSELUG00000023973	lsg1	100	63.790	MGP_CAROLIEiJ_G0020648	Lsg1	100	63.790	Mus_caroli
ENSELUG00000023973	lsg1	100	63.482	ENSMUSG00000022538	Lsg1	100	63.482	Mus_musculus
ENSELUG00000023973	lsg1	99	63.142	MGP_PahariEiJ_G0016352	Lsg1	100	63.093	Mus_pahari
ENSELUG00000023973	lsg1	100	63.174	MGP_SPRETEiJ_G0021544	Lsg1	100	63.328	Mus_spretus
ENSELUG00000023973	lsg1	100	61.446	ENSMPUG00000003734	LSG1	100	61.237	Mustela_putorius_furo
ENSELUG00000023973	lsg1	100	61.970	ENSMLUG00000012548	LSG1	100	62.557	Myotis_lucifugus
ENSELUG00000023973	lsg1	99	62.422	ENSNGAG00000021872	Lsg1	99	62.422	Nannospalax_galili
ENSELUG00000023973	lsg1	99	62.027	ENSNLEG00000008293	LSG1	99	62.632	Nomascus_leucogenys
ENSELUG00000023973	lsg1	71	70.103	ENSMEUG00000009041	-	84	70.103	Notamacropus_eugenii
ENSELUG00000023973	lsg1	100	71.558	ENSONIG00000002635	lsg1	100	71.861	Oreochromis_niloticus
ENSELUG00000023973	lsg1	95	65.858	ENSOANG00000012742	LSG1	99	65.858	Ornithorhynchus_anatinus
ENSELUG00000023973	lsg1	99	61.898	ENSOCUG00000004817	LSG1	99	61.480	Oryctolagus_cuniculus
ENSELUG00000023973	lsg1	98	73.115	ENSORLG00000007695	lsg1	100	73.194	Oryzias_latipes
ENSELUG00000023973	lsg1	98	71.656	ENSORLG00020016286	lsg1	100	72.540	Oryzias_latipes_hni
ENSELUG00000023973	lsg1	98	73.443	ENSORLG00015012025	lsg1	100	73.194	Oryzias_latipes_hsok
ENSELUG00000023973	lsg1	98	71.824	ENSOMEG00000022379	lsg1	100	71.770	Oryzias_melastigma
ENSELUG00000023973	lsg1	99	61.111	ENSOGAG00000003475	LSG1	99	60.475	Otolemur_garnettii
ENSELUG00000023973	lsg1	100	62.709	ENSOARG00000020403	LSG1	100	62.709	Ovis_aries
ENSELUG00000023973	lsg1	99	62.969	ENSPPAG00000029271	LSG1	99	63.142	Pan_paniscus
ENSELUG00000023973	lsg1	100	60.000	ENSPPRG00000010281	LSG1	100	59.701	Panthera_pardus
ENSELUG00000023973	lsg1	100	60.483	ENSPTIG00000010789	LSG1	100	60.181	Panthera_tigris_altaica
ENSELUG00000023973	lsg1	99	62.236	ENSPTRG00000015760	LSG1	99	62.991	Pan_troglodytes
ENSELUG00000023973	lsg1	99	62.443	ENSPANG00000018249	LSG1	99	62.085	Papio_anubis
ENSELUG00000023973	lsg1	99	68.594	ENSPKIG00000002895	lsg1	99	69.531	Paramormyrops_kingsleyae
ENSELUG00000023973	lsg1	96	60.658	ENSPSIG00000009821	LSG1	99	60.658	Pelodiscus_sinensis
ENSELUG00000023973	lsg1	95	72.013	ENSPMGG00000000931	lsg1	100	71.849	Periophthalmus_magnuspinnatus
ENSELUG00000023973	lsg1	99	62.595	ENSPEMG00000012082	-	99	62.021	Peromyscus_maniculatus_bairdii
ENSELUG00000023973	lsg1	99	59.520	ENSPMAG00000007451	lsg1	99	59.248	Petromyzon_marinus
ENSELUG00000023973	lsg1	100	63.684	ENSPCIG00000013890	LSG1	81	63.684	Phascolarctos_cinereus
ENSELUG00000023973	lsg1	98	73.302	ENSPFOG00000021882	lsg1	100	72.881	Poecilia_formosa
ENSELUG00000023973	lsg1	98	73.016	ENSPLAG00000019536	lsg1	100	73.065	Poecilia_latipinna
ENSELUG00000023973	lsg1	98	72.283	ENSPMEG00000017281	lsg1	100	71.889	Poecilia_mexicana
ENSELUG00000023973	lsg1	98	62.402	ENSPREG00000006048	lsg1	100	63.166	Poecilia_reticulata
ENSELUG00000023973	lsg1	91	61.716	ENSPPYG00000014425	LSG1	100	62.376	Pongo_abelii
ENSELUG00000023973	lsg1	89	66.667	ENSPCAG00000005511	LSG1	90	66.667	Procavia_capensis
ENSELUG00000023973	lsg1	99	60.272	ENSPCOG00000012360	LSG1	99	60.546	Propithecus_coquereli
ENSELUG00000023973	lsg1	100	71.342	ENSPNYG00000021994	lsg1	100	70.739	Pundamilia_nyererei
ENSELUG00000023973	lsg1	100	73.231	ENSPNAG00000015533	lsg1	100	72.615	Pygocentrus_nattereri
ENSELUG00000023973	lsg1	100	62.519	ENSRNOG00000001727	Lsg1	100	62.879	Rattus_norvegicus
ENSELUG00000023973	lsg1	99	61.103	ENSRBIG00000029053	LSG1	99	62.443	Rhinopithecus_bieti
ENSELUG00000023973	lsg1	99	61.103	ENSRROG00000037702	LSG1	99	62.443	Rhinopithecus_roxellana
ENSELUG00000023973	lsg1	82	41.651	YGL099W	LSG1	76	41.651	Saccharomyces_cerevisiae
ENSELUG00000023973	lsg1	99	61.573	ENSSBOG00000034938	LSG1	99	61.573	Saimiri_boliviensis_boliviensis
ENSELUG00000023973	lsg1	77	60.377	ENSSHAG00000003487	LSG1	99	59.811	Sarcophilus_harrisii
ENSELUG00000023973	lsg1	98	71.406	ENSSFOG00015008955	lsg1	100	70.416	Scleropages_formosus
ENSELUG00000023973	lsg1	98	72.671	ENSSDUG00000004622	lsg1	100	71.994	Seriola_dumerili
ENSELUG00000023973	lsg1	98	72.611	ENSSLDG00000010869	lsg1	100	72.543	Seriola_lalandi_dorsalis
ENSELUG00000023973	lsg1	84	63.081	ENSSARG00000012981	LSG1	84	60.665	Sorex_araneus
ENSELUG00000023973	lsg1	100	64.706	ENSSPUG00000016347	LSG1	100	64.599	Sphenodon_punctatus
ENSELUG00000023973	lsg1	100	74.204	ENSSPAG00000005508	lsg1	100	74.367	Stegastes_partitus
ENSELUG00000023973	lsg1	100	61.043	ENSSSCG00000011827	LSG1	100	61.196	Sus_scrofa
ENSELUG00000023973	lsg1	89	60.500	ENSTGUG00000009068	LSG1	100	60.833	Taeniopygia_guttata
ENSELUG00000023973	lsg1	98	68.480	ENSTRUG00000017380	lsg1	100	68.175	Takifugu_rubripes
ENSELUG00000023973	lsg1	98	71.132	ENSTNIG00000015570	lsg1	100	71.384	Tetraodon_nigroviridis
ENSELUG00000023973	lsg1	100	58.143	ENSTTRG00000000559	LSG1	100	57.991	Tursiops_truncatus
ENSELUG00000023973	lsg1	100	60.332	ENSUAMG00000012454	LSG1	100	60.332	Ursus_americanus
ENSELUG00000023973	lsg1	100	60.332	ENSUMAG00000000855	LSG1	100	60.332	Ursus_maritimus
ENSELUG00000023973	lsg1	95	59.113	ENSVPAG00000012400	LSG1	100	59.113	Vicugna_pacos
ENSELUG00000023973	lsg1	95	62.261	ENSVVUG00000008956	LSG1	99	60.856	Vulpes_vulpes
ENSELUG00000023973	lsg1	100	64.308	ENSXETG00000003451	lsg1	100	64.615	Xenopus_tropicalis
ENSELUG00000023973	lsg1	98	72.337	ENSXCOG00000003239	lsg1	100	72.403	Xiphophorus_couchianus
ENSELUG00000023973	lsg1	98	72.144	ENSXMAG00000005536	lsg1	100	72.170	Xiphophorus_maculatus