EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000024007 (Gene tree)
Gene ID: 105028713
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF46.1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 88498 bases
Position: chrLG04:4544427-4632924
Accession: 105028713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000025337	zf-C2H2	PF00096.26	3.6e-42	1	7
ENSELUP00000025337	zf-C2H2	PF00096.26	3.6e-42	2	7
ENSELUP00000025337	zf-C2H2	PF00096.26	3.6e-42	3	7
ENSELUP00000025337	zf-C2H2	PF00096.26	3.6e-42	4	7
ENSELUP00000025337	zf-C2H2	PF00096.26	3.6e-42	5	7
ENSELUP00000025337	zf-C2H2	PF00096.26	3.6e-42	6	7
ENSELUP00000025337	zf-C2H2	PF00096.26	3.6e-42	7	7
ENSELUP00000025333	zf-C2H2	PF00096.26	2.3e-25	1	3
ENSELUP00000025333	zf-C2H2	PF00096.26	2.3e-25	2	3
ENSELUP00000025333	zf-C2H2	PF00096.26	2.3e-25	3	3
ENSELUP00000025327	zf-C2H2	PF00096.26	1.2e-23	1	4
ENSELUP00000025327	zf-C2H2	PF00096.26	1.2e-23	2	4
ENSELUP00000025327	zf-C2H2	PF00096.26	1.2e-23	3	4
ENSELUP00000025327	zf-C2H2	PF00096.26	1.2e-23	4	4
ENSELUP00000025322	zf-C2H2	PF00096.26	3.8e-23	1	4
ENSELUP00000025322	zf-C2H2	PF00096.26	3.8e-23	2	4
ENSELUP00000025322	zf-C2H2	PF00096.26	3.8e-23	3	4
ENSELUP00000025322	zf-C2H2	PF00096.26	3.8e-23	4	4
ENSELUP00000025327	zf-met	PF12874.7	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000043511	-	1779	-	ENSELUP00000025337	592 (aa)	-	-
ENSELUT00000043510	-	5255	-	ENSELUP00000025327	311 (aa)	-	-
ENSELUT00000036996	-	2168	XM_010901641	ENSELUP00000025333	612 (aa)	XP_010899943	UPI0005768608
ENSELUT00000036982	-	5066	-	ENSELUP00000025322	433 (aa)	-	-

Gene Model

Click here to download ENSELUG00000024007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000024007's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000024007	-	88	48.039	ENSELUG00000013357	-	97	48.039
ENSELUG00000024007	-	66	52.941	ENSELUG00000013311	-	64	52.941
ENSELUG00000024007	-	98	51.724	ENSELUG00000017412	-	55	51.724
ENSELUG00000024007	-	79	50.000	ENSELUG00000001968	-	70	50.000
ENSELUG00000024007	-	85	36.538	ENSELUG00000005894	prdm5	65	46.154
ENSELUG00000024007	-	81	32.468	ENSELUG00000010423	znf646	81	32.468
ENSELUG00000024007	-	64	46.341	ENSELUG00000008797	-	50	46.341
ENSELUG00000024007	-	64	38.776	ENSELUG00000018438	znf341	56	38.776
ENSELUG00000024007	-	81	47.664	ENSELUG00000013796	-	68	47.664
ENSELUG00000024007	-	92	45.745	ENSELUG00000021499	-	97	46.341
ENSELUG00000024007	-	87	39.286	ENSELUG00000021560	-	70	39.286
ENSELUG00000024007	-	78	41.221	ENSELUG00000019008	-	87	48.855
ENSELUG00000024007	-	88	51.579	ENSELUG00000013245	-	95	50.000
ENSELUG00000024007	-	80	47.706	ENSELUG00000021254	-	76	47.706
ENSELUG00000024007	-	81	45.536	ENSELUG00000021229	-	84	53.571
ENSELUG00000024007	-	93	53.521	ENSELUG00000012597	-	99	51.852
ENSELUG00000024007	-	95	31.183	ENSELUG00000016988	-	94	40.860
ENSELUG00000024007	-	78	37.975	ENSELUG00000001466	znf711	52	37.975
ENSELUG00000024007	-	80	51.818	ENSELUG00000012986	-	51	51.818
ENSELUG00000024007	-	82	48.624	ENSELUG00000022942	-	71	48.624
ENSELUG00000024007	-	78	40.000	ENSELUG00000017700	znf710b	60	40.000
ENSELUG00000024007	-	79	38.158	ENSELUG00000021551	-	71	40.580
ENSELUG00000024007	-	78	42.857	ENSELUG00000008786	-	69	43.617
ENSELUG00000024007	-	82	41.892	ENSELUG00000006058	-	77	46.341
ENSELUG00000024007	-	94	34.615	ENSELUG00000010566	si:dkey-182i3.9	72	37.963
ENSELUG00000024007	-	65	48.148	ENSELUG00000000281	-	72	48.148
ENSELUG00000024007	-	85	34.586	ENSELUG00000005912	-	85	37.768
ENSELUG00000024007	-	81	41.739	ENSELUG00000013844	-	78	41.818
ENSELUG00000024007	-	68	41.026	ENSELUG00000020017	-	69	41.026
ENSELUG00000024007	-	55	42.453	ENSELUG00000017233	znf652	66	44.444
ENSELUG00000024007	-	82	41.481	ENSELUG00000020794	-	64	40.870
ENSELUG00000024007	-	84	50.926	ENSELUG00000008148	-	74	50.926
ENSELUG00000024007	-	79	52.727	ENSELUG00000021242	-	85	52.727
ENSELUG00000024007	-	60	41.860	ENSELUG00000016933	gfi1b	57	47.059
ENSELUG00000024007	-	78	46.789	ENSELUG00000018737	znf526	74	33.062
ENSELUG00000024007	-	58	44.156	ENSELUG00000024006	-	54	44.156
ENSELUG00000024007	-	82	42.683	ENSELUG00000020211	znf236	66	42.683
ENSELUG00000024007	-	93	42.373	ENSELUG00000013321	-	86	53.043
ENSELUG00000024007	-	75	47.887	ENSELUG00000019880	-	98	51.546
ENSELUG00000024007	-	78	41.146	ENSELUG00000021391	-	70	46.078
ENSELUG00000024007	-	77	44.068	ENSELUG00000004677	-	60	44.068
ENSELUG00000024007	-	86	30.909	ENSELUG00000017454	si:ch73-367f21.6	95	45.455
ENSELUG00000024007	-	81	50.562	ENSELUG00000017958	-	72	50.562
ENSELUG00000024007	-	79	43.636	ENSELUG00000021287	-	76	50.000
ENSELUG00000024007	-	87	36.538	ENSELUG00000000485	-	88	52.174
ENSELUG00000024007	-	83	33.594	ENSELUG00000010993	znf319b	95	31.760
ENSELUG00000024007	-	68	46.154	ENSELUG00000009654	-	65	45.763
ENSELUG00000024007	-	86	48.485	ENSELUG00000017463	-	92	48.485
ENSELUG00000024007	-	82	41.364	ENSELUG00000007694	-	77	43.885
ENSELUG00000024007	-	87	41.739	ENSELUG00000005665	zfp64	73	32.743
ENSELUG00000024007	-	61	46.296	ENSELUG00000016397	-	52	46.067
ENSELUG00000024007	-	84	50.943	ENSELUG00000009575	-	99	50.943
ENSELUG00000024007	-	84	37.719	ENSELUG00000010454	-	65	37.719
ENSELUG00000024007	-	82	47.692	ENSELUG00000013094	-	97	50.000
ENSELUG00000024007	-	88	38.071	ENSELUG00000019204	-	99	46.667
ENSELUG00000024007	-	80	41.667	ENSELUG00000017783	-	68	41.667
ENSELUG00000024007	-	85	42.157	ENSELUG00000013064	-	75	42.157
ENSELUG00000024007	-	78	43.617	ENSELUG00000002844	-	50	40.698
ENSELUG00000024007	-	77	41.379	ENSELUG00000011838	-	63	49.565
ENSELUG00000024007	-	80	48.113	ENSELUG00000013348	-	97	48.113
ENSELUG00000024007	-	76	44.737	ENSELUG00000013342	-	64	44.444
ENSELUG00000024007	-	80	42.336	ENSELUG00000012931	-	64	42.336
ENSELUG00000024007	-	82	50.962	ENSELUG00000021525	-	70	50.962
ENSELUG00000024007	-	77	46.226	ENSELUG00000021381	-	74	46.226
ENSELUG00000024007	-	82	50.476	ENSELUG00000018970	-	81	50.893
ENSELUG00000024007	-	86	47.059	ENSELUG00000013806	-	68	48.913
ENSELUG00000024007	-	81	49.580	ENSELUG00000021248	-	84	49.580
ENSELUG00000024007	-	79	47.170	ENSELUG00000018405	-	95	44.545
ENSELUG00000024007	-	79	52.174	ENSELUG00000021355	-	97	48.889
ENSELUG00000024007	-	81	36.943	ENSELUG00000001909	-	90	39.535

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000024007	-	78	36.601	ENSAPOG00000008319	-	71	38.462	Acanthochromis_polyacanthus
ENSELUG00000024007	-	83	56.311	ENSAPOG00000019138	-	62	52.542	Acanthochromis_polyacanthus
ENSELUG00000024007	-	61	52.941	ENSACIG00000017892	-	85	52.941	Amphilophus_citrinellus
ENSELUG00000024007	-	65	46.602	ENSACIG00000004641	-	58	46.602	Amphilophus_citrinellus
ENSELUG00000024007	-	60	48.387	ENSACIG00000007464	-	52	40.000	Amphilophus_citrinellus
ENSELUG00000024007	-	62	46.809	ENSACIG00000006826	-	66	46.809	Amphilophus_citrinellus
ENSELUG00000024007	-	74	37.755	ENSACIG00000002944	-	76	37.755	Amphilophus_citrinellus
ENSELUG00000024007	-	78	38.462	ENSAOCG00000015944	-	83	38.462	Amphiprion_ocellaris
ENSELUG00000024007	-	83	47.312	ENSAOCG00000016897	-	64	50.000	Amphiprion_ocellaris
ENSELUG00000024007	-	78	38.060	ENSAOCG00000014769	-	91	38.462	Amphiprion_ocellaris
ENSELUG00000024007	-	58	42.857	ENSAOCG00000001325	-	84	42.857	Amphiprion_ocellaris
ENSELUG00000024007	-	58	32.824	ENSAOCG00000006744	-	79	38.983	Amphiprion_ocellaris
ENSELUG00000024007	-	76	43.750	ENSAPEG00000010013	-	56	44.048	Amphiprion_percula
ENSELUG00000024007	-	83	47.312	ENSAPEG00000001556	-	64	50.000	Amphiprion_percula
ENSELUG00000024007	-	72	51.807	ENSAPEG00000018762	-	59	51.807	Amphiprion_percula
ENSELUG00000024007	-	85	42.667	ENSATEG00000018931	-	95	42.667	Anabas_testudineus
ENSELUG00000024007	-	64	46.939	ENSACLG00000011658	-	96	46.939	Astatotilapia_calliptera
ENSELUG00000024007	-	67	44.898	ENSACLG00000005694	-	53	44.898	Astatotilapia_calliptera
ENSELUG00000024007	-	78	50.000	ENSAMXG00000029518	-	52	54.054	Astyanax_mexicanus
ENSELUG00000024007	-	60	42.105	ENSCING00000002128	zf(c2h2)-35	65	43.478	Ciona_intestinalis
ENSELUG00000024007	-	63	45.918	ENSCSEG00000010453	-	53	53.922	Cynoglossus_semilaevis
ENSELUG00000024007	-	62	44.286	ENSCSEG00000010264	-	69	44.286	Cynoglossus_semilaevis
ENSELUG00000024007	-	75	52.252	ENSCSEG00000008525	-	65	41.290	Cynoglossus_semilaevis
ENSELUG00000024007	-	56	48.750	ENSCSEG00000015593	-	75	48.750	Cynoglossus_semilaevis
ENSELUG00000024007	-	76	47.619	ENSCVAG00000015616	-	96	47.619	Cyprinodon_variegatus
ENSELUG00000024007	-	82	43.810	ENSCVAG00000003250	-	76	48.598	Cyprinodon_variegatus
ENSELUG00000024007	-	57	46.809	ENSCVAG00000012682	-	67	46.809	Cyprinodon_variegatus
ENSELUG00000024007	-	59	41.558	ENSCVAG00000020141	-	75	41.558	Cyprinodon_variegatus
ENSELUG00000024007	-	71	47.273	ENSCVAG00000006653	-	77	47.573	Cyprinodon_variegatus
ENSELUG00000024007	-	61	45.977	ENSEBUG00000002290	-	59	45.977	Eptatretus_burgeri
ENSELUG00000024007	-	70	41.525	ENSEBUG00000007931	-	79	41.525	Eptatretus_burgeri
ENSELUG00000024007	-	67	35.593	ENSGAFG00000012545	-	58	35.593	Gambusia_affinis
ENSELUG00000024007	-	59	47.727	ENSGAFG00000001879	-	63	47.727	Gambusia_affinis
ENSELUG00000024007	-	85	50.000	ENSGAFG00000008204	-	64	50.000	Gambusia_affinis
ENSELUG00000024007	-	67	44.898	ENSHBUG00000006656	-	67	44.898	Haplochromis_burtoni
ENSELUG00000024007	-	55	47.191	ENSHCOG00000020670	-	73	47.191	Hippocampus_comes
ENSELUG00000024007	-	66	50.980	ENSHCOG00000008550	-	53	52.941	Hippocampus_comes
ENSELUG00000024007	-	66	50.980	ENSHCOG00000001873	-	53	52.941	Hippocampus_comes
ENSELUG00000024007	-	64	53.425	ENSHCOG00000019389	-	50	53.425	Hippocampus_comes
ENSELUG00000024007	-	78	49.107	ENSHCOG00000013489	-	99	49.107	Hippocampus_comes
ENSELUG00000024007	-	78	35.593	ENSHCOG00000008227	-	54	35.593	Hippocampus_comes
ENSELUG00000024007	-	77	52.128	ENSHCOG00000015497	-	80	52.128	Hippocampus_comes
ENSELUG00000024007	-	71	40.698	ENSKMAG00000014184	-	59	40.698	Kryptolebias_marmoratus
ENSELUG00000024007	-	81	41.176	ENSKMAG00000007699	-	70	41.176	Kryptolebias_marmoratus
ENSELUG00000024007	-	59	39.604	ENSLBEG00000017424	-	92	44.737	Labrus_bergylta
ENSELUG00000024007	-	58	50.602	ENSLBEG00000006161	-	83	47.423	Labrus_bergylta
ENSELUG00000024007	-	67	45.794	ENSLBEG00000007106	-	72	45.794	Labrus_bergylta
ENSELUG00000024007	-	86	40.000	ENSLBEG00000001132	-	97	37.634	Labrus_bergylta
ENSELUG00000024007	-	89	49.020	ENSLBEG00000011210	-	64	49.020	Labrus_bergylta
ENSELUG00000024007	-	83	40.000	ENSLOCG00000004208	-	99	48.571	Lepisosteus_oculatus
ENSELUG00000024007	-	88	49.367	ENSMAMG00000017939	-	91	49.367	Mastacembelus_armatus
ENSELUG00000024007	-	73	43.878	ENSMZEG00005013907	-	77	43.878	Maylandia_zebra
ENSELUG00000024007	-	51	45.455	ENSMMOG00000013330	-	55	46.429	Mola_mola
ENSELUG00000024007	-	66	48.649	ENSMALG00000004279	-	77	48.649	Monopterus_albus
ENSELUG00000024007	-	91	39.744	ENSONIG00000007967	-	71	39.744	Oreochromis_niloticus
ENSELUG00000024007	-	66	40.179	ENSONIG00000005050	-	95	40.179	Oreochromis_niloticus
ENSELUG00000024007	-	58	45.000	ENSORLG00000028711	-	91	45.000	Oryzias_latipes
ENSELUG00000024007	-	91	32.847	ENSORLG00000002268	-	96	35.065	Oryzias_latipes
ENSELUG00000024007	-	82	39.130	ENSORLG00000021885	-	87	46.914	Oryzias_latipes
ENSELUG00000024007	-	65	48.333	ENSORLG00020019227	-	51	48.148	Oryzias_latipes_hni
ENSELUG00000024007	-	84	43.651	ENSORLG00020018921	-	82	44.444	Oryzias_latipes_hni
ENSELUG00000024007	-	64	46.914	ENSORLG00015018099	-	72	46.914	Oryzias_latipes_hsok
ENSELUG00000024007	-	67	42.857	ENSOMEG00000005578	-	71	41.250	Oryzias_melastigma
ENSELUG00000024007	-	80	45.370	ENSPMGG00000009571	-	75	51.136	Periophthalmus_magnuspinnatus
ENSELUG00000024007	-	59	52.727	ENSPMGG00000019750	-	95	52.727	Periophthalmus_magnuspinnatus
ENSELUG00000024007	-	89	48.571	ENSPMGG00000002455	-	92	48.571	Periophthalmus_magnuspinnatus
ENSELUG00000024007	-	55	50.000	ENSPMGG00000002659	-	77	50.000	Periophthalmus_magnuspinnatus
ENSELUG00000024007	-	61	49.107	ENSPMGG00000007051	-	57	50.588	Periophthalmus_magnuspinnatus
ENSELUG00000024007	-	69	52.525	ENSPMGG00000002661	-	92	52.525	Periophthalmus_magnuspinnatus
ENSELUG00000024007	-	81	47.706	ENSPMGG00000006928	-	55	47.706	Periophthalmus_magnuspinnatus
ENSELUG00000024007	-	54	39.623	ENSPMAG00000002022	-	100	42.056	Petromyzon_marinus
ENSELUG00000024007	-	64	36.250	ENSPMAG00000004189	-	98	40.566	Petromyzon_marinus
ENSELUG00000024007	-	58	51.220	ENSPMAG00000000839	-	96	51.220	Petromyzon_marinus
ENSELUG00000024007	-	77	34.573	ENSPFOG00000018860	-	99	48.739	Poecilia_formosa
ENSELUG00000024007	-	67	49.515	ENSPFOG00000009491	-	65	49.515	Poecilia_formosa
ENSELUG00000024007	-	60	45.455	ENSPLAG00000010067	-	65	45.455	Poecilia_latipinna
ENSELUG00000024007	-	67	48.913	ENSPLAG00000008941	-	86	48.913	Poecilia_latipinna
ENSELUG00000024007	-	66	46.316	ENSPLAG00000014832	-	83	46.316	Poecilia_latipinna
ENSELUG00000024007	-	67	49.515	ENSPMEG00000024117	-	65	49.515	Poecilia_mexicana
ENSELUG00000024007	-	66	46.316	ENSPMEG00000005210	-	83	46.316	Poecilia_mexicana
ENSELUG00000024007	-	81	41.379	ENSPMEG00000002953	-	58	46.269	Poecilia_mexicana
ENSELUG00000024007	-	89	40.517	ENSPREG00000002603	-	93	40.517	Poecilia_reticulata
ENSELUG00000024007	-	59	40.385	ENSPREG00000009488	-	90	40.385	Poecilia_reticulata
ENSELUG00000024007	-	75	50.000	ENSPNYG00000017888	-	66	54.082	Pundamilia_nyererei
ENSELUG00000024007	-	78	46.835	ENSPNAG00000005946	-	97	45.000	Pygocentrus_nattereri
ENSELUG00000024007	-	55	45.631	ENSSFOG00015011531	-	77	47.674	Scleropages_formosus
ENSELUG00000024007	-	82	46.535	ENSSMAG00000013291	-	97	46.809	Scophthalmus_maximus
ENSELUG00000024007	-	80	37.313	ENSSMAG00000008308	-	68	49.000	Scophthalmus_maximus
ENSELUG00000024007	-	69	51.807	ENSSMAG00000004259	-	81	51.807	Scophthalmus_maximus
ENSELUG00000024007	-	86	48.000	ENSSDUG00000013048	-	65	48.000	Seriola_dumerili
ENSELUG00000024007	-	74	45.122	ENSSLDG00000014436	-	73	45.122	Seriola_lalandi_dorsalis
ENSELUG00000024007	-	80	48.000	ENSSLDG00000011849	-	74	48.000	Seriola_lalandi_dorsalis
ENSELUG00000024007	-	56	45.556	ENSSPAG00000011533	-	78	45.556	Stegastes_partitus
ENSELUG00000024007	-	76	42.241	ENSSPAG00000011544	-	53	45.238	Stegastes_partitus
ENSELUG00000024007	-	68	39.759	ENSSPAG00000005770	-	64	43.421	Stegastes_partitus
ENSELUG00000024007	-	82	35.971	ENSXETG00000012506	znf91	99	50.980	Xenopus_tropicalis
ENSELUG00000024007	-	74	42.222	ENSXCOG00000003441	-	59	43.269	Xiphophorus_couchianus
ENSELUG00000024007	-	66	42.857	ENSXCOG00000020768	-	72	42.857	Xiphophorus_couchianus
ENSELUG00000024007	-	54	44.828	ENSXCOG00000014360	-	50	44.828	Xiphophorus_couchianus
ENSELUG00000024007	-	64	46.667	ENSXCOG00000000254	-	82	46.667	Xiphophorus_couchianus
ENSELUG00000024007	-	67	46.316	ENSXMAG00000012936	-	83	46.316	Xiphophorus_maculatus