EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000024048 (Gene tree)
Gene ID: 105028688
Gene Symbol: clp1
Alias: fa28a12|wu:fa28a12
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 1983 bases
Position: chrLG04:4521668-4523650
Accession: 105028688
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000025394	Clp1	PF06807.14	3.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000037071	-	1334	XM_010901611	ENSELUP00000025394	443 (aa)	XP_010899913	UPI00057667B3

Gene Model

Click here to download ENSELUG00000024048's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000024048's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000024048	clp1	95	79.810	ENSG00000172409	CLP1	97	79.810	Homo_sapiens
ENSELUG00000024048	clp1	100	86.771	ENSAPOG00000008242	clp1	100	86.771	Acanthochromis_polyacanthus
ENSELUG00000024048	clp1	95	79.335	ENSAMEG00000014551	CLP1	95	79.335	Ailuropoda_melanoleuca
ENSELUG00000024048	clp1	100	86.099	ENSACIG00000006310	clp1	99	86.099	Amphilophus_citrinellus
ENSELUG00000024048	clp1	100	86.771	ENSAOCG00000010681	clp1	98	89.387	Amphiprion_ocellaris
ENSELUG00000024048	clp1	100	86.771	ENSAPEG00000012165	clp1	98	89.387	Amphiprion_percula
ENSELUG00000024048	clp1	100	86.547	ENSATEG00000012374	clp1	100	86.547	Anabas_testudineus
ENSELUG00000024048	clp1	95	79.286	ENSACAG00000007139	CLP1	97	79.286	Anolis_carolinensis
ENSELUG00000024048	clp1	95	79.810	ENSANAG00000034935	CLP1	97	79.810	Aotus_nancymaae
ENSELUG00000024048	clp1	100	86.099	ENSACLG00000013573	clp1	100	86.099	Astatotilapia_calliptera
ENSELUG00000024048	clp1	95	90.974	ENSAMXG00000014194	clp1	98	90.974	Astyanax_mexicanus
ENSELUG00000024048	clp1	95	79.335	ENSBTAG00000006493	CLP1	97	79.335	Bos_taurus
ENSELUG00000024048	clp1	94	47.281	WBGene00010304	clpf-1	97	47.281	Caenorhabditis_elegans
ENSELUG00000024048	clp1	95	79.810	ENSCJAG00000008748	CLP1	97	79.810	Callithrix_jacchus
ENSELUG00000024048	clp1	95	79.335	ENSCAFG00000007815	CLP1	97	79.335	Canis_familiaris
ENSELUG00000024048	clp1	95	79.335	ENSCAFG00020000903	CLP1	97	79.335	Canis_lupus_dingo
ENSELUG00000024048	clp1	95	79.335	ENSCHIG00000023497	CLP1	97	79.335	Capra_hircus
ENSELUG00000024048	clp1	98	77.931	ENSTSYG00000006824	CLP1	96	79.572	Carlito_syrichta
ENSELUG00000024048	clp1	95	79.572	ENSCAPG00000009703	CLP1	97	79.572	Cavia_aperea
ENSELUG00000024048	clp1	95	79.572	ENSCPOG00000012554	CLP1	99	79.572	Cavia_porcellus
ENSELUG00000024048	clp1	95	79.572	ENSCCAG00000031957	CLP1	97	79.572	Cebus_capucinus
ENSELUG00000024048	clp1	95	79.810	ENSCATG00000044628	CLP1	97	79.810	Cercocebus_atys
ENSELUG00000024048	clp1	95	79.572	ENSCLAG00000004094	CLP1	97	79.572	Chinchilla_lanigera
ENSELUG00000024048	clp1	95	79.810	ENSCSAG00000005994	CLP1	97	79.810	Chlorocebus_sabaeus
ENSELUG00000024048	clp1	95	79.524	ENSCPBG00000016843	CLP1	97	79.524	Chrysemys_picta_bellii
ENSELUG00000024048	clp1	95	62.768	ENSCING00000003779	-	96	62.768	Ciona_intestinalis
ENSELUG00000024048	clp1	94	63.636	ENSCSAVG00000003437	-	96	63.636	Ciona_savignyi
ENSELUG00000024048	clp1	95	79.810	ENSCANG00000034335	CLP1	97	79.810	Colobus_angolensis_palliatus
ENSELUG00000024048	clp1	95	79.097	ENSCGRG00001002227	CLP1	97	79.097	Cricetulus_griseus_chok1gshd
ENSELUG00000024048	clp1	95	79.097	ENSCGRG00000004328	CLP1	97	79.097	Cricetulus_griseus_crigri
ENSELUG00000024048	clp1	100	83.184	ENSCSEG00000008614	clp1	95	85.613	Cynoglossus_semilaevis
ENSELUG00000024048	clp1	100	85.874	ENSCVAG00000020101	clp1	100	85.874	Cyprinodon_variegatus
ENSELUG00000024048	clp1	100	88.090	ENSDARG00000063663	clp1	100	88.315	Danio_rerio
ENSELUG00000024048	clp1	95	79.286	ENSDNOG00000042415	CLP1	87	79.286	Dasypus_novemcinctus
ENSELUG00000024048	clp1	95	79.335	ENSDORG00000014685	Clp1	97	79.335	Dipodomys_ordii
ENSELUG00000024048	clp1	95	53.555	FBgn0033842	cbc	97	53.699	Drosophila_melanogaster
ENSELUG00000024048	clp1	95	79.572	ENSETEG00000003009	CLP1	97	79.572	Echinops_telfairi
ENSELUG00000024048	clp1	96	66.979	ENSEBUG00000011648	clp1	97	67.458	Eptatretus_burgeri
ENSELUG00000024048	clp1	95	79.810	ENSEASG00005002093	CLP1	97	79.810	Equus_asinus_asinus
ENSELUG00000024048	clp1	99	75.938	ENSECAG00000011597	CLP1	97	79.810	Equus_caballus
ENSELUG00000024048	clp1	95	79.097	ENSEEUG00000012771	CLP1	97	79.097	Erinaceus_europaeus
ENSELUG00000024048	clp1	99	77.346	ENSFCAG00000006633	CLP1	97	79.335	Felis_catus
ENSELUG00000024048	clp1	95	79.048	ENSFALG00000011145	CLP1	97	79.048	Ficedula_albicollis
ENSELUG00000024048	clp1	95	79.572	ENSFDAG00000000234	CLP1	97	79.572	Fukomys_damarensis
ENSELUG00000024048	clp1	100	86.099	ENSFHEG00000014760	CLP1	100	86.099	Fundulus_heteroclitus
ENSELUG00000024048	clp1	100	91.422	ENSGMOG00000019340	clp1	95	93.587	Gadus_morhua
ENSELUG00000024048	clp1	95	79.048	ENSGALG00000007370	CLP1	97	79.048	Gallus_gallus
ENSELUG00000024048	clp1	100	86.323	ENSGAFG00000003020	clp1	100	86.323	Gambusia_affinis
ENSELUG00000024048	clp1	100	86.323	ENSGACG00000017832	clp1	95	88.915	Gasterosteus_aculeatus
ENSELUG00000024048	clp1	95	79.524	ENSGAGG00000013279	CLP1	97	79.524	Gopherus_agassizii
ENSELUG00000024048	clp1	95	79.810	ENSGGOG00000023006	CLP1	97	79.810	Gorilla_gorilla
ENSELUG00000024048	clp1	100	86.323	ENSHBUG00000010436	clp1	100	86.323	Haplochromis_burtoni
ENSELUG00000024048	clp1	95	79.572	ENSHGLG00000009914	CLP1	97	79.572	Heterocephalus_glaber_female
ENSELUG00000024048	clp1	95	79.572	ENSHGLG00100006105	CLP1	97	79.572	Heterocephalus_glaber_male
ENSELUG00000024048	clp1	100	86.996	ENSHCOG00000010072	clp1	100	86.771	Hippocampus_comes
ENSELUG00000024048	clp1	100	88.117	ENSIPUG00000016238	clp1	99	88.117	Ictalurus_punctatus
ENSELUG00000024048	clp1	95	79.572	ENSSTOG00000029257	CLP1	97	79.572	Ictidomys_tridecemlineatus
ENSELUG00000024048	clp1	95	79.097	ENSJJAG00000023691	Clp1	97	79.097	Jaculus_jaculus
ENSELUG00000024048	clp1	100	86.099	ENSKMAG00000011990	clp1	100	86.099	Kryptolebias_marmoratus
ENSELUG00000024048	clp1	100	86.771	ENSLBEG00000010201	clp1	100	86.771	Labrus_bergylta
ENSELUG00000024048	clp1	95	78.860	ENSLACG00000003160	CLP1	97	78.860	Latimeria_chalumnae
ENSELUG00000024048	clp1	72	87.888	ENSLOCG00000008074	clp1	100	89.130	Lepisosteus_oculatus
ENSELUG00000024048	clp1	95	79.335	ENSLAFG00000014907	CLP1	97	79.335	Loxodonta_africana
ENSELUG00000024048	clp1	95	79.810	ENSMFAG00000046074	CLP1	97	79.810	Macaca_fascicularis
ENSELUG00000024048	clp1	95	79.810	ENSMMUG00000038007	CLP1	96	79.810	Macaca_mulatta
ENSELUG00000024048	clp1	95	79.810	ENSMNEG00000000259	CLP1	97	79.810	Macaca_nemestrina
ENSELUG00000024048	clp1	95	79.810	ENSMLEG00000043556	CLP1	97	79.810	Mandrillus_leucophaeus
ENSELUG00000024048	clp1	100	86.771	ENSMAMG00000002149	clp1	100	86.547	Mastacembelus_armatus
ENSELUG00000024048	clp1	100	86.099	ENSMZEG00005002850	clp1	100	86.099	Maylandia_zebra
ENSELUG00000024048	clp1	95	79.048	ENSMGAG00000009643	CLP1	97	79.048	Meleagris_gallopavo
ENSELUG00000024048	clp1	95	79.286	ENSMAUG00000016261	Clp1	97	79.286	Mesocricetus_auratus
ENSELUG00000024048	clp1	95	79.335	ENSMICG00000004895	CLP1	97	79.335	Microcebus_murinus
ENSELUG00000024048	clp1	95	79.335	ENSMOCG00000005498	Clp1	97	79.335	Microtus_ochrogaster
ENSELUG00000024048	clp1	100	85.202	ENSMMOG00000003229	clp1	100	85.202	Mola_mola
ENSELUG00000024048	clp1	95	79.286	ENSMODG00000024148	-	97	79.286	Monodelphis_domestica
ENSELUG00000024048	clp1	95	79.286	ENSMODG00000020107	-	97	79.286	Monodelphis_domestica
ENSELUG00000024048	clp1	100	86.099	ENSMALG00000014239	clp1	100	86.099	Monopterus_albus
ENSELUG00000024048	clp1	95	79.097	MGP_CAROLIEiJ_G0023726	Clp1	97	79.097	Mus_caroli
ENSELUG00000024048	clp1	95	79.097	ENSMUSG00000027079	Clp1	97	79.097	Mus_musculus
ENSELUG00000024048	clp1	95	79.097	MGP_PahariEiJ_G0025177	Clp1	97	79.097	Mus_pahari
ENSELUG00000024048	clp1	95	79.097	MGP_SPRETEiJ_G0024646	Clp1	97	79.097	Mus_spretus
ENSELUG00000024048	clp1	95	79.335	ENSMPUG00000000268	CLP1	97	79.335	Mustela_putorius_furo
ENSELUG00000024048	clp1	95	79.335	ENSMLUG00000007904	CLP1	97	79.335	Myotis_lucifugus
ENSELUG00000024048	clp1	95	79.097	ENSNGAG00000006165	Clp1	97	79.097	Nannospalax_galili
ENSELUG00000024048	clp1	100	86.323	ENSNBRG00000005225	clp1	100	86.323	Neolamprologus_brichardi
ENSELUG00000024048	clp1	77	78.571	ENSNLEG00000012809	-	96	78.571	Nomascus_leucogenys
ENSELUG00000024048	clp1	95	79.097	ENSMEUG00000010949	CLP1	97	79.097	Notamacropus_eugenii
ENSELUG00000024048	clp1	69	79.739	ENSOPRG00000007329	CLP1	100	79.739	Ochotona_princeps
ENSELUG00000024048	clp1	95	79.572	ENSODEG00000011410	CLP1	97	79.572	Octodon_degus
ENSELUG00000024048	clp1	100	86.099	ENSONIG00000005089	clp1	100	86.099	Oreochromis_niloticus
ENSELUG00000024048	clp1	95	79.572	ENSOCUG00000007045	CLP1	97	79.572	Oryctolagus_cuniculus
ENSELUG00000024048	clp1	100	83.857	ENSORLG00000003647	clp1	100	83.857	Oryzias_latipes
ENSELUG00000024048	clp1	100	83.632	ENSORLG00020016676	clp1	100	83.632	Oryzias_latipes_hni
ENSELUG00000024048	clp1	100	83.857	ENSORLG00015019484	clp1	100	83.857	Oryzias_latipes_hsok
ENSELUG00000024048	clp1	100	84.081	ENSOMEG00000021303	clp1	95	87.028	Oryzias_melastigma
ENSELUG00000024048	clp1	95	79.335	ENSOGAG00000004508	CLP1	97	79.335	Otolemur_garnettii
ENSELUG00000024048	clp1	95	78.385	ENSOARG00000010145	CLP1	96	78.385	Ovis_aries
ENSELUG00000024048	clp1	95	79.810	ENSPPAG00000041519	CLP1	97	79.810	Pan_paniscus
ENSELUG00000024048	clp1	95	79.335	ENSPPRG00000006135	CLP1	97	79.335	Panthera_pardus
ENSELUG00000024048	clp1	95	79.335	ENSPTIG00000015866	CLP1	97	79.335	Panthera_tigris_altaica
ENSELUG00000024048	clp1	95	79.810	ENSPTRG00000047318	CLP1	97	79.810	Pan_troglodytes
ENSELUG00000024048	clp1	95	79.810	ENSPANG00000017078	CLP1	95	79.810	Papio_anubis
ENSELUG00000024048	clp1	100	90.646	ENSPKIG00000007697	clp1	94	93.160	Paramormyrops_kingsleyae
ENSELUG00000024048	clp1	90	77.330	ENSPSIG00000005468	CLP1	97	77.330	Pelodiscus_sinensis
ENSELUG00000024048	clp1	100	85.650	ENSPMGG00000012171	clp1	96	87.972	Periophthalmus_magnuspinnatus
ENSELUG00000024048	clp1	95	79.335	ENSPEMG00000011213	-	97	79.335	Peromyscus_maniculatus_bairdii
ENSELUG00000024048	clp1	95	70.071	ENSPMAG00000006707	clp1	97	70.071	Petromyzon_marinus
ENSELUG00000024048	clp1	95	79.524	ENSPCIG00000011899	CLP1	97	79.524	Phascolarctos_cinereus
ENSELUG00000024048	clp1	100	86.099	ENSPFOG00000008169	clp1	100	86.099	Poecilia_formosa
ENSELUG00000024048	clp1	100	86.099	ENSPLAG00000022388	clp1	100	86.099	Poecilia_latipinna
ENSELUG00000024048	clp1	100	86.099	ENSPMEG00000021088	clp1	100	86.099	Poecilia_mexicana
ENSELUG00000024048	clp1	100	86.547	ENSPREG00000017802	clp1	100	86.547	Poecilia_reticulata
ENSELUG00000024048	clp1	52	77.155	ENSPPYG00000003266	-	100	77.155	Pongo_abelii
ENSELUG00000024048	clp1	95	79.335	ENSPCOG00000000360	CLP1	96	79.335	Propithecus_coquereli
ENSELUG00000024048	clp1	95	79.335	ENSPVAG00000016270	CLP1	97	79.335	Pteropus_vampyrus
ENSELUG00000024048	clp1	100	86.323	ENSPNYG00000017274	clp1	99	86.323	Pundamilia_nyererei
ENSELUG00000024048	clp1	100	88.764	ENSPNAG00000026460	clp1	95	91.924	Pygocentrus_nattereri
ENSELUG00000024048	clp1	95	79.097	ENSRNOG00000007416	Clp1	97	79.097	Rattus_norvegicus
ENSELUG00000024048	clp1	95	79.810	ENSRBIG00000018191	CLP1	97	79.810	Rhinopithecus_bieti
ENSELUG00000024048	clp1	95	79.810	ENSRROG00000039265	CLP1	97	79.810	Rhinopithecus_roxellana
ENSELUG00000024048	clp1	93	64.976	ENSSBOG00000010558	-	93	64.976	Saimiri_boliviensis_boliviensis
ENSELUG00000024048	clp1	95	79.810	ENSSBOG00000032517	-	97	79.810	Saimiri_boliviensis_boliviensis
ENSELUG00000024048	clp1	95	79.335	ENSSHAG00000015695	CLP1	97	79.335	Sarcophilus_harrisii
ENSELUG00000024048	clp1	100	89.111	ENSSFOG00015000628	clp1	100	89.111	Scleropages_formosus
ENSELUG00000024048	clp1	100	86.323	ENSSMAG00000019423	clp1	99	86.099	Scophthalmus_maximus
ENSELUG00000024048	clp1	100	86.996	ENSSDUG00000014495	clp1	100	86.996	Seriola_dumerili
ENSELUG00000024048	clp1	100	86.771	ENSSLDG00000000937	clp1	100	86.771	Seriola_lalandi_dorsalis
ENSELUG00000024048	clp1	52	76.623	ENSSARG00000002459	CLP1	100	76.623	Sorex_araneus
ENSELUG00000024048	clp1	95	78.810	ENSSPUG00000016811	CLP1	97	78.810	Sphenodon_punctatus
ENSELUG00000024048	clp1	100	86.771	ENSSPAG00000016052	clp1	100	86.771	Stegastes_partitus
ENSELUG00000024048	clp1	95	79.335	ENSSSCG00000031442	CLP1	97	79.335	Sus_scrofa
ENSELUG00000024048	clp1	95	79.048	ENSTGUG00000007002	CLP1	97	79.048	Taeniopygia_guttata
ENSELUG00000024048	clp1	100	85.650	ENSTRUG00000012602	clp1	95	88.443	Takifugu_rubripes
ENSELUG00000024048	clp1	100	85.426	ENSTNIG00000013125	clp1	95	88.208	Tetraodon_nigroviridis
ENSELUG00000024048	clp1	95	79.048	ENSTBEG00000009975	CLP1	97	79.048	Tupaia_belangeri
ENSELUG00000024048	clp1	95	79.097	ENSTTRG00000002096	CLP1	97	79.097	Tursiops_truncatus
ENSELUG00000024048	clp1	95	79.335	ENSUAMG00000011388	CLP1	97	79.335	Ursus_americanus
ENSELUG00000024048	clp1	95	79.335	ENSUMAG00000018317	CLP1	97	79.335	Ursus_maritimus
ENSELUG00000024048	clp1	95	79.335	ENSVVUG00000017138	CLP1	94	79.335	Vulpes_vulpes
ENSELUG00000024048	clp1	100	70.429	ENSXETG00000007088	clp1	95	73.159	Xenopus_tropicalis
ENSELUG00000024048	clp1	100	86.099	ENSXCOG00000002287	clp1	100	86.099	Xiphophorus_couchianus
ENSELUG00000024048	clp1	100	86.099	ENSXMAG00000009783	clp1	100	86.099	Xiphophorus_maculatus