EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000024182 (Gene tree)
Gene ID: -
Gene Symbol: SRSF6 (1 of many)
Alias: B52|SFRS6|SRP55
Full Name: serine/arginine-rich splicing factor 6
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 6456 bases
Position: chrLG17:30724934-30731389
Accession: 105009000
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000025440	RRM_1	PF00076.22	1.5e-31	1	2
ENSELUP00000025440	RRM_1	PF00076.22	1.5e-31	2	2
ENSELUP00000025402	RRM_1	PF00076.22	1.5e-18	1	1
ENSELUP00000042737	RRM_1	PF00076.22	1e-16	1	1
ENSELUP00000025498	RRM_1	PF00076.22	2e-16	1	1
ENSELUP00000025465	RRM_1	PF00076.22	6.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000037076	SRSF6 (1 of many)-201	453	-	ENSELUP00000025402	150 (aa)	-	-
ENSELUT00000037208	SRSF6 (1 of many)-205	414	-	ENSELUP00000025498	137 (aa)	-	-
ENSELUT00000037155	SRSF6 (1 of many)-204	2663	-	ENSELUP00000025465	248 (aa)	-	-
ENSELUT00000037082	SRSF6 (1 of many)-202	309	-	ENSELUP00000042737	102 (aa)	-	-
ENSELUT00000037128	SRSF6 (1 of many)-203	948	XM_010868385	ENSELUP00000025440	315 (aa)	XP_010866687	-

Gene Model

Click here to download ENSELUG00000024182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000024182's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000024182	SRSF6	67	30.263	ENSELUG00000004652	-	64	30.435
ENSELUG00000024182	SRSF6	67	31.579	ENSELUG00000019588	cirbpb	54	33.036
ENSELUG00000024182	SRSF6	73	30.000	ENSELUG00000017108	SRSF10	64	31.250
ENSELUG00000024182	SRSF6	83	43.182	ENSELUG00000002390	srsf3a	72	40.625
ENSELUG00000024182	SRSF6	87	60.000	ENSELUG00000019852	srsf5b	83	55.714
ENSELUG00000024182	SRSF6	74	45.570	ENSELUG00000018155	srsf7b	57	45.570
ENSELUG00000024182	SRSF6	97	82.828	ENSELUG00000013506	SRSF6	80	86.022
ENSELUG00000024182	SRSF6	88	60.156	ENSELUG00000020439	srsf5a	61	61.257
ENSELUG00000024182	SRSF6	87	41.176	ENSELUG00000021646	srsf1a	88	38.431
ENSELUG00000024182	SRSF6	67	31.579	ENSELUG00000004675	-	87	32.283
ENSELUG00000024182	SRSF6	71	42.667	ENSELUG00000016922	srsf7a	56	42.308
ENSELUG00000024182	SRSF6	91	63.235	ENSELUG00000017551	srsf4	95	64.706
ENSELUG00000024182	SRSF6	67	32.895	ENSELUG00000019617	-	54	32.673
ENSELUG00000024182	SRSF6	94	39.423	ENSELUG00000012644	SRSF9	66	41.573
ENSELUG00000024182	SRSF6	76	43.210	ENSELUG00000014357	SRSF3	66	36.975
ENSELUG00000024182	SRSF6	87	41.912	ENSELUG00000018267	pigs	65	46.023
ENSELUG00000024182	SRSF6	87	35.556	ENSELUG00000021669	srsf9	66	42.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000024182	SRSF6	85	87.356	ENSG00000124193	SRSF6	98	59.286	Homo_sapiens
ENSELUG00000024182	SRSF6	90	89.600	ENSAPOG00000016635	-	91	80.132	Acanthochromis_polyacanthus
ENSELUG00000024182	SRSF6	90	56.452	ENSAMEG00000003710	SRSF6	88	55.844	Ailuropoda_melanoleuca
ENSELUG00000024182	SRSF6	86	89.773	ENSACIG00000020091	-	95	83.846	Amphilophus_citrinellus
ENSELUG00000024182	SRSF6	88	82.500	ENSACIG00000023658	-	56	86.339	Amphilophus_citrinellus
ENSELUG00000024182	SRSF6	76	93.590	ENSAOCG00000019438	-	85	82.474	Amphiprion_ocellaris
ENSELUG00000024182	SRSF6	97	82.828	ENSAOCG00000004309	-	57	87.634	Amphiprion_ocellaris
ENSELUG00000024182	SRSF6	86	89.773	ENSAPEG00000020746	-	65	85.638	Amphiprion_percula
ENSELUG00000024182	SRSF6	90	87.805	ENSAPEG00000013086	-	53	87.634	Amphiprion_percula
ENSELUG00000024182	SRSF6	86	89.773	ENSATEG00000007255	-	71	80.311	Anabas_testudineus
ENSELUG00000024182	SRSF6	64	73.563	ENSAPLG00000014472	SRSF6	88	62.191	Anas_platyrhynchos
ENSELUG00000024182	SRSF6	85	87.356	ENSANAG00000024080	SRSF6	98	59.286	Aotus_nancymaae
ENSELUG00000024182	SRSF6	72	94.521	ENSACLG00000024373	-	99	84.211	Astatotilapia_calliptera
ENSELUG00000024182	SRSF6	90	90.244	ENSAMXG00000042692	-	98	83.212	Astyanax_mexicanus
ENSELUG00000024182	SRSF6	85	88.506	ENSBTAG00000008527	SRSF6	98	60.000	Bos_taurus
ENSELUG00000024182	SRSF6	85	87.356	ENSCJAG00000048403	SRSF6	98	59.286	Callithrix_jacchus
ENSELUG00000024182	SRSF6	85	88.506	ENSCAFG00000009289	SRSF6	98	60.000	Canis_familiaris
ENSELUG00000024182	SRSF6	85	88.506	ENSCAFG00020013559	SRSF6	98	60.000	Canis_lupus_dingo
ENSELUG00000024182	SRSF6	85	88.506	ENSCHIG00000015890	-	98	60.000	Capra_hircus
ENSELUG00000024182	SRSF6	85	87.356	ENSCPOG00000011761	SRSF6	98	59.286	Cavia_porcellus
ENSELUG00000024182	SRSF6	85	87.356	ENSCCAG00000026018	-	98	59.286	Cebus_capucinus
ENSELUG00000024182	SRSF6	90	68.800	ENSCCAG00000018540	-	60	75.401	Cebus_capucinus
ENSELUG00000024182	SRSF6	85	87.356	ENSCATG00000030794	SRSF6	98	59.286	Cercocebus_atys
ENSELUG00000024182	SRSF6	85	87.356	ENSCLAG00000010247	SRSF6	98	59.286	Chinchilla_lanigera
ENSELUG00000024182	SRSF6	90	82.114	ENSCPBG00000018200	SRSF6	54	83.938	Chrysemys_picta_bellii
ENSELUG00000024182	SRSF6	90	77.236	ENSCANG00000037774	-	53	84.946	Colobus_angolensis_palliatus
ENSELUG00000024182	SRSF6	85	87.356	ENSCGRG00001022339	Srsf6	98	59.286	Cricetulus_griseus_chok1gshd
ENSELUG00000024182	SRSF6	99	71.141	ENSCSEG00000019778	SRSF6	99	73.684	Cynoglossus_semilaevis
ENSELUG00000024182	SRSF6	99	74.815	ENSCVAG00000001863	SRSF6	95	82.308	Cyprinodon_variegatus
ENSELUG00000024182	SRSF6	90	82.258	ENSDARG00000016783	srsf6b	100	83.158	Danio_rerio
ENSELUG00000024182	SRSF6	85	87.356	ENSDORG00000028378	Srsf6	98	59.286	Dipodomys_ordii
ENSELUG00000024182	SRSF6	90	76.423	ENSETEG00000006221	SRSF6	53	79.167	Echinops_telfairi
ENSELUG00000024182	SRSF6	76	92.308	ENSECAG00000023932	SRSF6	56	86.022	Equus_caballus
ENSELUG00000024182	SRSF6	76	92.308	ENSFCAG00000032814	SRSF6	88	66.340	Felis_catus
ENSELUG00000024182	SRSF6	90	85.366	ENSFHEG00000023065	srsf6a	54	86.022	Fundulus_heteroclitus
ENSELUG00000024182	SRSF6	92	82.540	ENSGMOG00000014458	srsf6a	51	83.684	Gadus_morhua
ENSELUG00000024182	SRSF6	87	74.157	ENSGMOG00000006105	srsf6a	70	64.977	Gadus_morhua
ENSELUG00000024182	SRSF6	90	81.452	ENSGALG00000000990	SRSF6	98	60.714	Gallus_gallus
ENSELUG00000024182	SRSF6	94	85.271	ENSGAFG00000019088	-	75	85.271	Gambusia_affinis
ENSELUG00000024182	SRSF6	90	86.179	ENSGACG00000006084	srsf6a	51	85.484	Gasterosteus_aculeatus
ENSELUG00000024182	SRSF6	90	82.114	ENSGAGG00000003238	SRSF6	54	83.938	Gopherus_agassizii
ENSELUG00000024182	SRSF6	85	87.356	ENSGGOG00000009808	SRSF6	98	59.286	Gorilla_gorilla
ENSELUG00000024182	SRSF6	90	81.301	ENSHBUG00000006386	-	57	88.172	Haplochromis_burtoni
ENSELUG00000024182	SRSF6	94	58.252	ENSHGLG00000007701	-	57	67.204	Heterocephalus_glaber_female
ENSELUG00000024182	SRSF6	85	87.356	ENSHGLG00000007348	SRSF6	98	59.286	Heterocephalus_glaber_female
ENSELUG00000024182	SRSF6	90	81.301	ENSHCOG00000002740	srsf6a	57	84.127	Hippocampus_comes
ENSELUG00000024182	SRSF6	82	77.876	ENSIPUG00000016856	SRSF6	58	75.362	Ictalurus_punctatus
ENSELUG00000024182	SRSF6	76	96.154	ENSIPUG00000004776	-	63	87.831	Ictalurus_punctatus
ENSELUG00000024182	SRSF6	85	87.356	ENSSTOG00000010866	SRSF6	98	59.286	Ictidomys_tridecemlineatus
ENSELUG00000024182	SRSF6	90	76.423	ENSKMAG00000011934	srsf6a	59	83.871	Kryptolebias_marmoratus
ENSELUG00000024182	SRSF6	90	88.618	ENSLBEG00000007356	srsf6a	51	87.568	Labrus_bergylta
ENSELUG00000024182	SRSF6	85	87.356	ENSMFAG00000036925	SRSF6	98	59.286	Macaca_fascicularis
ENSELUG00000024182	SRSF6	85	87.356	ENSMMUG00000006742	SRSF6	98	59.286	Macaca_mulatta
ENSELUG00000024182	SRSF6	85	87.356	ENSMNEG00000027392	-	98	59.286	Macaca_nemestrina
ENSELUG00000024182	SRSF6	87	92.135	ENSMAMG00000023477	-	94	92.308	Mastacembelus_armatus
ENSELUG00000024182	SRSF6	90	81.301	ENSMZEG00005008032	-	57	88.172	Maylandia_zebra
ENSELUG00000024182	SRSF6	90	76.423	ENSMZEG00005020658	-	60	82.065	Maylandia_zebra
ENSELUG00000024182	SRSF6	85	87.356	ENSMAUG00000019086	-	98	59.286	Mesocricetus_auratus
ENSELUG00000024182	SRSF6	85	87.356	ENSMICG00000008537	SRSF6	98	59.286	Microcebus_murinus
ENSELUG00000024182	SRSF6	76	94.872	ENSMMOG00000015241	-	85	89.011	Mola_mola
ENSELUG00000024182	SRSF6	90	84.553	ENSMODG00000003107	SRSF6	100	65.015	Monodelphis_domestica
ENSELUG00000024182	SRSF6	85	87.356	MGP_CAROLIEiJ_G0024606	Srsf6	98	59.286	Mus_caroli
ENSELUG00000024182	SRSF6	85	87.356	ENSMUSG00000016921	Srsf6	98	59.286	Mus_musculus
ENSELUG00000024182	SRSF6	85	87.356	MGP_PahariEiJ_G0026050	Srsf6	98	59.286	Mus_pahari
ENSELUG00000024182	SRSF6	85	87.356	MGP_SPRETEiJ_G0025528	Srsf6	98	59.286	Mus_spretus
ENSELUG00000024182	SRSF6	90	49.194	ENSMLUG00000016618	SRSF6	53	57.075	Myotis_lucifugus
ENSELUG00000024182	SRSF6	85	87.356	ENSNGAG00000017560	Srsf6	98	59.286	Nannospalax_galili
ENSELUG00000024182	SRSF6	90	82.114	ENSNBRG00000014709	-	57	88.172	Neolamprologus_brichardi
ENSELUG00000024182	SRSF6	85	87.356	ENSNLEG00000006524	SRSF6	98	59.286	Nomascus_leucogenys
ENSELUG00000024182	SRSF6	90	86.179	ENSMEUG00000014615	SRSF6	95	73.103	Notamacropus_eugenii
ENSELUG00000024182	SRSF6	85	87.356	ENSODEG00000016510	-	98	59.286	Octodon_degus
ENSELUG00000024182	SRSF6	90	88.618	ENSONIG00000001925	-	52	87.634	Oreochromis_niloticus
ENSELUG00000024182	SRSF6	98	41.791	ENSOCUG00000023999	-	70	52.747	Oryctolagus_cuniculus
ENSELUG00000024182	SRSF6	90	81.301	ENSORLG00020017506	srsf6a	91	69.512	Oryzias_latipes_hni
ENSELUG00000024182	SRSF6	90	78.049	ENSOGAG00000014468	SRSF6	53	85.484	Otolemur_garnettii
ENSELUG00000024182	SRSF6	93	67.969	ENSPPAG00000043131	-	57	73.118	Pan_paniscus
ENSELUG00000024182	SRSF6	90	77.236	ENSPPAG00000034327	-	53	85.484	Pan_paniscus
ENSELUG00000024182	SRSF6	76	92.308	ENSPPRG00000008917	SRSF6	88	66.340	Panthera_pardus
ENSELUG00000024182	SRSF6	93	67.969	ENSPTRG00000046274	-	57	73.118	Pan_troglodytes
ENSELUG00000024182	SRSF6	85	87.356	ENSPTRG00000044686	-	98	59.286	Pan_troglodytes
ENSELUG00000024182	SRSF6	85	87.356	ENSPANG00000035224	SRSF6	98	59.286	Papio_anubis
ENSELUG00000024182	SRSF6	90	91.870	ENSPKIG00000015603	-	88	88.462	Paramormyrops_kingsleyae
ENSELUG00000024182	SRSF6	87	71.901	ENSPKIG00000015703	-	92	65.385	Paramormyrops_kingsleyae
ENSELUG00000024182	SRSF6	92	96.296	ENSPKIG00000018463	-	90	90.217	Paramormyrops_kingsleyae
ENSELUG00000024182	SRSF6	90	84.553	ENSPMGG00000014963	srsf6a	55	87.766	Periophthalmus_magnuspinnatus
ENSELUG00000024182	SRSF6	53	79.630	ENSPEMG00000022405	-	82	46.729	Peromyscus_maniculatus_bairdii
ENSELUG00000024182	SRSF6	85	89.655	ENSPCIG00000003820	SRSF6	100	65.015	Phascolarctos_cinereus
ENSELUG00000024182	SRSF6	90	86.992	ENSPLAG00000009243	srsf6a	77	86.992	Poecilia_latipinna
ENSELUG00000024182	SRSF6	90	86.179	ENSPMEG00000006042	SRSF6	53	87.766	Poecilia_mexicana
ENSELUG00000024182	SRSF6	90	86.992	ENSPREG00000001040	srsf6a	89	83.942	Poecilia_reticulata
ENSELUG00000024182	SRSF6	90	78.049	ENSPPYG00000011019	SRSF6	53	86.022	Pongo_abelii
ENSELUG00000024182	SRSF6	85	87.356	ENSPCOG00000026364	SRSF6	98	59.286	Propithecus_coquereli
ENSELUG00000024182	SRSF6	90	82.114	ENSPNYG00000004944	-	57	88.172	Pundamilia_nyererei
ENSELUG00000024182	SRSF6	90	86.992	ENSPNYG00000011272	-	83	68.421	Pundamilia_nyererei
ENSELUG00000024182	SRSF6	90	85.366	ENSPNAG00000023179	-	95	85.075	Pygocentrus_nattereri
ENSELUG00000024182	SRSF6	90	78.049	ENSRNOG00000006380	Srsf6	54	86.022	Rattus_norvegicus
ENSELUG00000024182	SRSF6	90	80.488	ENSRBIG00000041414	SRSF6	67	84.091	Rhinopithecus_bieti
ENSELUG00000024182	SRSF6	85	87.356	ENSRROG00000029989	SRSF6	98	59.286	Rhinopithecus_roxellana
ENSELUG00000024182	SRSF6	88	70.330	ENSSBOG00000034078	-	54	71.196	Saimiri_boliviensis_boliviensis
ENSELUG00000024182	SRSF6	85	87.356	ENSSBOG00000033708	-	98	59.286	Saimiri_boliviensis_boliviensis
ENSELUG00000024182	SRSF6	90	84.553	ENSSHAG00000012805	SRSF6	54	87.097	Sarcophilus_harrisii
ENSELUG00000024182	SRSF6	90	84.553	ENSSFOG00015015169	SRSF6	100	77.460	Scleropages_formosus
ENSELUG00000024182	SRSF6	75	96.053	ENSSFOG00015019681	-	53	85.204	Scleropages_formosus
ENSELUG00000024182	SRSF6	90	79.675	ENSSMAG00000017447	-	59	83.085	Scophthalmus_maximus
ENSELUG00000024182	SRSF6	77	91.139	ENSSMAG00000014861	-	100	64.444	Scophthalmus_maximus
ENSELUG00000024182	SRSF6	90	87.805	ENSSDUG00000016097	srsf6a	94	67.477	Seriola_dumerili
ENSELUG00000024182	SRSF6	94	85.417	ENSSDUG00000011036	-	95	92.308	Seriola_dumerili
ENSELUG00000024182	SRSF6	94	85.417	ENSSLDG00000014858	-	95	92.308	Seriola_lalandi_dorsalis
ENSELUG00000024182	SRSF6	90	87.805	ENSSLDG00000022841	srsf6a	71	73.896	Seriola_lalandi_dorsalis
ENSELUG00000024182	SRSF6	90	79.675	ENSSPUG00000004967	SRSF6	98	60.714	Sphenodon_punctatus
ENSELUG00000024182	SRSF6	87	89.888	ENSSPAG00000021913	-	98	84.694	Stegastes_partitus
ENSELUG00000024182	SRSF6	90	89.600	ENSSPAG00000002362	srsf6a	51	87.097	Stegastes_partitus
ENSELUG00000024182	SRSF6	76	93.590	ENSTGUG00000003455	SRSF6	90	65.517	Taeniopygia_guttata
ENSELUG00000024182	SRSF6	76	93.590	ENSTRUG00000021397	-	85	93.590	Takifugu_rubripes
ENSELUG00000024182	SRSF6	90	87.805	ENSTNIG00000001692	srsf6a	56	88.172	Tetraodon_nigroviridis
ENSELUG00000024182	SRSF6	85	88.506	ENSUAMG00000003559	SRSF6	98	60.000	Ursus_americanus
ENSELUG00000024182	SRSF6	85	58.621	ENSVVUG00000019276	-	98	41.429	Vulpes_vulpes
ENSELUG00000024182	SRSF6	90	84.553	ENSXMAG00000021849	srsf6a	55	87.166	Xiphophorus_maculatus