EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000024250 (Gene tree)
Gene ID: 105022318
Gene Symbol: pym1
Alias: wibg|zgc:65891|zgc:77281
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 6245 bases
Position: chrLG12:11329077-11335321
Accession: 105022318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000042865	Mago-bind	PF09282.10	5.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000043634	-	4293	XM_010890588	ENSELUP00000042865	202 (aa)	XP_010888890	UPI000577A78A

Gene Model

Click here to download ENSELUG00000024250's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03013	RNA transport	KEGG
els03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000024250's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000024250	pym1	94	59.091	ENSG00000170473	PYM1	96	58.291	Homo_sapiens
ENSELUG00000024250	pym1	100	68.720	ENSAPOG00000023045	pym1	100	68.720	Acanthochromis_polyacanthus
ENSELUG00000024250	pym1	91	56.085	ENSAMEG00000003091	PYM1	94	54.872	Ailuropoda_melanoleuca
ENSELUG00000024250	pym1	100	67.757	ENSACIG00000012769	pym1	100	69.626	Amphilophus_citrinellus
ENSELUG00000024250	pym1	100	69.524	ENSAOCG00000021358	pym1	100	69.048	Amphiprion_ocellaris
ENSELUG00000024250	pym1	100	69.524	ENSAPEG00000022679	pym1	100	69.048	Amphiprion_percula
ENSELUG00000024250	pym1	100	66.190	ENSATEG00000024022	pym1	96	66.667	Anabas_testudineus
ENSELUG00000024250	pym1	94	61.275	ENSACAG00000005714	PYM1	96	58.454	Anolis_carolinensis
ENSELUG00000024250	pym1	94	58.081	ENSANAG00000036967	PYM1	96	57.286	Aotus_nancymaae
ENSELUG00000024250	pym1	99	64.532	ENSAMXG00000007650	pym1	94	63.682	Astyanax_mexicanus
ENSELUG00000024250	pym1	94	59.596	ENSBTAG00000031146	PYM1	96	58.794	Bos_taurus
ENSELUG00000024250	pym1	94	59.091	ENSCJAG00000041077	PYM1	96	58.291	Callithrix_jacchus
ENSELUG00000024250	pym1	94	60.714	ENSCAFG00000000076	PYM1	96	58.911	Canis_familiaris
ENSELUG00000024250	pym1	94	60.714	ENSCAFG00020026099	PYM1	96	58.911	Canis_lupus_dingo
ENSELUG00000024250	pym1	94	59.694	ENSCHIG00000026207	PYM1	96	58.794	Capra_hircus
ENSELUG00000024250	pym1	94	56.566	ENSTSYG00000000787	PYM1	96	55.779	Carlito_syrichta
ENSELUG00000024250	pym1	89	58.065	ENSCAPG00000010374	PYM1	95	55.729	Cavia_aperea
ENSELUG00000024250	pym1	94	59.091	ENSCPOG00000031546	PYM1	96	56.863	Cavia_porcellus
ENSELUG00000024250	pym1	94	59.091	ENSCCAG00000026187	PYM1	96	58.291	Cebus_capucinus
ENSELUG00000024250	pym1	94	59.184	ENSCATG00000018801	PYM1	96	58.291	Cercocebus_atys
ENSELUG00000024250	pym1	94	58.673	ENSCLAG00000007964	PYM1	96	56.281	Chinchilla_lanigera
ENSELUG00000024250	pym1	89	58.378	ENSCSAG00000005291	PYM1	94	57.447	Chlorocebus_sabaeus
ENSELUG00000024250	pym1	98	37.198	ENSCING00000006448	-	96	37.313	Ciona_intestinalis
ENSELUG00000024250	pym1	98	38.863	ENSCSAVG00000009805	-	87	40.206	Ciona_savignyi
ENSELUG00000024250	pym1	93	56.477	ENSCANG00000019757	-	85	56.477	Colobus_angolensis_palliatus
ENSELUG00000024250	pym1	94	59.184	ENSCANG00000020338	-	96	58.291	Colobus_angolensis_palliatus
ENSELUG00000024250	pym1	88	53.107	ENSCGRG00001004231	-	90	51.630	Cricetulus_griseus_chok1gshd
ENSELUG00000024250	pym1	94	57.576	ENSCGRG00001018051	-	96	56.436	Cricetulus_griseus_chok1gshd
ENSELUG00000024250	pym1	94	57.576	ENSCGRG00000012495	-	96	56.436	Cricetulus_griseus_crigri
ENSELUG00000024250	pym1	88	53.107	ENSCGRG00000018933	-	90	51.630	Cricetulus_griseus_crigri
ENSELUG00000024250	pym1	94	63.452	ENSCSEG00000021531	pym1	100	65.550	Cynoglossus_semilaevis
ENSELUG00000024250	pym1	96	67.000	ENSCVAG00000017360	pym1	85	67.000	Cyprinodon_variegatus
ENSELUG00000024250	pym1	100	55.607	ENSDARG00000046024	pym1	95	54.922	Danio_rerio
ENSELUG00000024250	pym1	94	56.566	ENSDNOG00000048414	PYM1	88	56.281	Dasypus_novemcinctus
ENSELUG00000024250	pym1	94	58.209	ENSDORG00000029448	Pym1	96	57.843	Dipodomys_ordii
ENSELUG00000024250	pym1	89	57.838	ENSETEG00000004461	-	95	55.497	Echinops_telfairi
ENSELUG00000024250	pym1	88	57.297	ENSEASG00005002271	PYM1	82	56.452	Equus_asinus_asinus
ENSELUG00000024250	pym1	94	59.091	ENSECAG00000011870	PYM1	96	59.799	Equus_caballus
ENSELUG00000024250	pym1	94	58.673	ENSFCAG00000013967	PYM1	96	56.931	Felis_catus
ENSELUG00000024250	pym1	94	60.714	ENSFDAG00000006314	PYM1	96	59.799	Fukomys_damarensis
ENSELUG00000024250	pym1	94	67.647	ENSFHEG00000005884	pym1	100	66.197	Fundulus_heteroclitus
ENSELUG00000024250	pym1	94	63.776	ENSGMOG00000007239	pym1	94	61.000	Gadus_morhua
ENSELUG00000024250	pym1	94	62.626	ENSGALG00000046169	PYM1	96	61.692	Gallus_gallus
ENSELUG00000024250	pym1	100	66.047	ENSGAFG00000003280	pym1	100	65.116	Gambusia_affinis
ENSELUG00000024250	pym1	100	65.347	ENSGACG00000010703	pym1	100	65.347	Gasterosteus_aculeatus
ENSELUG00000024250	pym1	90	59.898	ENSGAGG00000001973	PYM1	86	59.000	Gopherus_agassizii
ENSELUG00000024250	pym1	94	58.586	ENSGGOG00000043246	PYM1	96	57.789	Gorilla_gorilla
ENSELUG00000024250	pym1	94	67.839	ENSHBUG00000012719	pym1	100	69.668	Haplochromis_burtoni
ENSELUG00000024250	pym1	94	58.586	ENSHGLG00000017155	PYM1	96	57.711	Heterocephalus_glaber_female
ENSELUG00000024250	pym1	94	58.586	ENSHGLG00100015341	PYM1	96	57.711	Heterocephalus_glaber_male
ENSELUG00000024250	pym1	100	60.377	ENSHCOG00000007987	pym1	82	59.901	Hippocampus_comes
ENSELUG00000024250	pym1	99	65.196	ENSIPUG00000005975	wibga	96	63.861	Ictalurus_punctatus
ENSELUG00000024250	pym1	94	58.586	ENSSTOG00000014206	PYM1	96	57.353	Ictidomys_tridecemlineatus
ENSELUG00000024250	pym1	94	57.436	ENSJJAG00000013338	Pym1	96	57.071	Jaculus_jaculus
ENSELUG00000024250	pym1	99	62.273	ENSKMAG00000006351	pym1	96	62.736	Kryptolebias_marmoratus
ENSELUG00000024250	pym1	100	66.507	ENSLBEG00000015707	pym1	100	66.507	Labrus_bergylta
ENSELUG00000024250	pym1	90	58.376	ENSLACG00000014398	PYM1	91	57.500	Latimeria_chalumnae
ENSELUG00000024250	pym1	94	60.101	ENSLAFG00000002369	PYM1	96	59.204	Loxodonta_africana
ENSELUG00000024250	pym1	94	59.184	ENSMFAG00000003048	PYM1	96	58.291	Macaca_fascicularis
ENSELUG00000024250	pym1	94	59.184	ENSMMUG00000011002	PYM1	96	58.291	Macaca_mulatta
ENSELUG00000024250	pym1	94	59.184	ENSMNEG00000034677	PYM1	96	58.291	Macaca_nemestrina
ENSELUG00000024250	pym1	94	59.184	ENSMLEG00000007971	PYM1	96	58.291	Mandrillus_leucophaeus
ENSELUG00000024250	pym1	100	68.203	ENSMAMG00000001588	pym1	96	67.943	Mastacembelus_armatus
ENSELUG00000024250	pym1	94	67.337	ENSMZEG00005026458	pym1	100	69.194	Maylandia_zebra
ENSELUG00000024250	pym1	94	57.071	ENSMAUG00000007318	Pym1	96	57.214	Mesocricetus_auratus
ENSELUG00000024250	pym1	94	58.673	ENSMICG00000032962	PYM1	96	57.789	Microcebus_murinus
ENSELUG00000024250	pym1	94	57.071	ENSMOCG00000010208	Pym1	96	56.716	Microtus_ochrogaster
ENSELUG00000024250	pym1	100	66.176	ENSMMOG00000009301	pym1	100	65.196	Mola_mola
ENSELUG00000024250	pym1	100	63.981	ENSMALG00000013496	pym1	100	67.773	Monopterus_albus
ENSELUG00000024250	pym1	93	59.067	MGP_CAROLIEiJ_G0015953	Pym1	96	57.789	Mus_caroli
ENSELUG00000024250	pym1	94	58.163	ENSMUSG00000064030	Pym1	96	57.789	Mus_musculus
ENSELUG00000024250	pym1	94	60.000	MGP_PahariEiJ_G0031131	Pym1	95	59.091	Mus_pahari
ENSELUG00000024250	pym1	94	58.163	MGP_SPRETEiJ_G0016778	Pym1	96	57.789	Mus_spretus
ENSELUG00000024250	pym1	94	59.694	ENSMPUG00000000931	PYM1	96	58.794	Mustela_putorius_furo
ENSELUG00000024250	pym1	94	54.822	ENSMLUG00000003586	PYM1	96	54.040	Myotis_lucifugus
ENSELUG00000024250	pym1	90	56.915	ENSNGAG00000019207	Pym1	89	56.545	Nannospalax_galili
ENSELUG00000024250	pym1	100	67.773	ENSNBRG00000006951	pym1	100	69.668	Neolamprologus_brichardi
ENSELUG00000024250	pym1	94	59.091	ENSNLEG00000017588	PYM1	96	58.291	Nomascus_leucogenys
ENSELUG00000024250	pym1	88	53.226	ENSMEUG00000001017	PYM1	95	51.813	Notamacropus_eugenii
ENSELUG00000024250	pym1	90	57.143	ENSOPRG00000007797	PYM1	90	55.729	Ochotona_princeps
ENSELUG00000024250	pym1	94	57.576	ENSODEG00000004289	PYM1	96	57.214	Octodon_degus
ENSELUG00000024250	pym1	94	66.832	ENSONIG00000016740	pym1	100	68.692	Oreochromis_niloticus
ENSELUG00000024250	pym1	89	56.383	ENSOCUG00000025969	PYM1	82	56.021	Oryctolagus_cuniculus
ENSELUG00000024250	pym1	100	65.550	ENSORLG00000030592	pym1	100	64.423	Oryzias_latipes
ENSELUG00000024250	pym1	100	64.455	ENSORLG00020011264	pym1	100	63.333	Oryzias_latipes_hni
ENSELUG00000024250	pym1	100	65.865	ENSORLG00015005287	pym1	100	64.734	Oryzias_latipes_hsok
ENSELUG00000024250	pym1	100	65.238	ENSOMEG00000022250	pym1	100	65.714	Oryzias_melastigma
ENSELUG00000024250	pym1	92	57.292	ENSOGAG00000007038	PYM1	92	56.477	Otolemur_garnettii
ENSELUG00000024250	pym1	94	59.596	ENSOARG00000010856	PYM1	96	58.794	Ovis_aries
ENSELUG00000024250	pym1	94	59.091	ENSPPAG00000043630	PYM1	96	58.291	Pan_paniscus
ENSELUG00000024250	pym1	94	59.694	ENSPPRG00000013243	PYM1	96	57.426	Panthera_pardus
ENSELUG00000024250	pym1	94	60.204	ENSPTIG00000017380	PYM1	96	57.789	Panthera_tigris_altaica
ENSELUG00000024250	pym1	94	59.091	ENSPTRG00000005067	PYM1	96	58.291	Pan_troglodytes
ENSELUG00000024250	pym1	94	58.673	ENSPANG00000009562	PYM1	96	57.789	Papio_anubis
ENSELUG00000024250	pym1	99	68.116	ENSPKIG00000006301	pym1	96	65.990	Paramormyrops_kingsleyae
ENSELUG00000024250	pym1	94	56.931	ENSPSIG00000003043	PYM1	96	56.098	Pelodiscus_sinensis
ENSELUG00000024250	pym1	99	63.415	ENSPMGG00000023161	pym1	95	63.452	Periophthalmus_magnuspinnatus
ENSELUG00000024250	pym1	94	56.500	ENSPEMG00000009372	Pym1	96	57.143	Peromyscus_maniculatus_bairdii
ENSELUG00000024250	pym1	91	54.124	ENSPCIG00000024658	PYM1	93	53.234	Phascolarctos_cinereus
ENSELUG00000024250	pym1	100	67.606	ENSPFOG00000008193	pym1	100	66.986	Poecilia_formosa
ENSELUG00000024250	pym1	100	67.606	ENSPLAG00000009228	pym1	100	66.197	Poecilia_latipinna
ENSELUG00000024250	pym1	100	67.606	ENSPMEG00000001505	pym1	100	66.197	Poecilia_mexicana
ENSELUG00000024250	pym1	90	57.219	ENSPPYG00000004635	PYM1	94	56.383	Pongo_abelii
ENSELUG00000024250	pym1	94	59.184	ENSPCOG00000019706	PYM1	96	57.789	Propithecus_coquereli
ENSELUG00000024250	pym1	90	59.043	ENSPVAG00000011437	PYM1	94	58.201	Pteropus_vampyrus
ENSELUG00000024250	pym1	94	68.687	ENSPNYG00000012871	pym1	100	70.476	Pundamilia_nyererei
ENSELUG00000024250	pym1	99	62.264	ENSPNAG00000018833	pym1	96	63.768	Pygocentrus_nattereri
ENSELUG00000024250	pym1	92	44.330	ENSRNOG00000049415	AABR07055413.1	51	58.252	Rattus_norvegicus
ENSELUG00000024250	pym1	90	55.319	ENSRNOG00000058130	Pym1	90	55.497	Rattus_norvegicus
ENSELUG00000024250	pym1	94	55.102	ENSRBIG00000033362	PYM1	95	54.271	Rhinopithecus_bieti
ENSELUG00000024250	pym1	94	59.184	ENSRROG00000043620	PYM1	96	58.291	Rhinopithecus_roxellana
ENSELUG00000024250	pym1	94	59.091	ENSSBOG00000029393	PYM1	96	58.291	Saimiri_boliviensis_boliviensis
ENSELUG00000024250	pym1	93	57.071	ENSSHAG00000008280	PYM1	96	54.902	Sarcophilus_harrisii
ENSELUG00000024250	pym1	93	68.750	ENSSFOG00015021475	pym1	100	68.116	Scleropages_formosus
ENSELUG00000024250	pym1	100	64.904	ENSSMAG00000020912	pym1	100	65.385	Scophthalmus_maximus
ENSELUG00000024250	pym1	100	68.224	ENSSDUG00000001807	pym1	100	68.692	Seriola_dumerili
ENSELUG00000024250	pym1	100	68.421	ENSSLDG00000013730	pym1	100	68.900	Seriola_lalandi_dorsalis
ENSELUG00000024250	pym1	89	56.383	ENSSARG00000009569	PYM1	95	55.497	Sorex_araneus
ENSELUG00000024250	pym1	91	60.622	ENSSPUG00000015059	PYM1	93	59.184	Sphenodon_punctatus
ENSELUG00000024250	pym1	100	66.822	ENSSPAG00000020100	pym1	96	67.317	Stegastes_partitus
ENSELUG00000024250	pym1	94	59.694	ENSSSCG00000040825	PYM1	96	58.291	Sus_scrofa
ENSELUG00000024250	pym1	99	64.651	ENSTRUG00000021367	pym1	96	69.898	Takifugu_rubripes
ENSELUG00000024250	pym1	100	62.326	ENSTNIG00000012534	pym1	95	62.927	Tetraodon_nigroviridis
ENSELUG00000024250	pym1	88	56.216	ENSTBEG00000004208	PYM1	95	53.927	Tupaia_belangeri
ENSELUG00000024250	pym1	90	58.511	ENSTTRG00000014971	PYM1	94	58.201	Tursiops_truncatus
ENSELUG00000024250	pym1	94	58.081	ENSUAMG00000014521	PYM1	96	57.286	Ursus_americanus
ENSELUG00000024250	pym1	88	57.297	ENSUMAG00000016241	PYM1	82	55.615	Ursus_maritimus
ENSELUG00000024250	pym1	94	60.204	ENSVVUG00000022749	PYM1	95	58.706	Vulpes_vulpes
ENSELUG00000024250	pym1	94	57.868	ENSXETG00000021850	pym1	96	60.309	Xenopus_tropicalis
ENSELUG00000024250	pym1	100	66.667	ENSXMAG00000011649	pym1	100	65.728	Xiphophorus_maculatus