EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000024279 (Gene tree)
Gene ID: 105021427
Gene Symbol: sar1ab
Alias: fd13d02|sar1a|wu:fd13d02|zgc:110650
Full Name: GTP-binding protein SAR1b-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 3880 bases
Position: chrLG06:17437611-17441490
Accession: 105021427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000042863	MMR_HSR1	PF01926.23	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000037324	-	2224	XM_010889088	ENSELUP00000042863	198 (aa)	XP_010887390	UPI0005778206

Gene Model

Click here to download ENSELUG00000024279's gene model file

Pathways

Pathway ID	Pathway Name	Source
els04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000024279's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000024279	sar1ab	100	85.859	ENSELUG00000013652	sar1a	100	85.859
ENSELUG00000024279	sar1ab	85	30.178	ENSELUG00000001287	-	87	30.178
ENSELUG00000024279	sar1ab	66	32.824	ENSELUG00000019582	-	58	32.824
ENSELUG00000024279	sar1ab	87	32.558	ENSELUG00000018031	arl3	86	32.558
ENSELUG00000024279	sar1ab	64	30.159	ENSELUG00000007052	arl5a	73	30.159
ENSELUG00000024279	sar1ab	56	37.815	ENSELUG00000023460	-	58	39.496
ENSELUG00000024279	sar1ab	94	30.000	ENSELUG00000002496	-	96	30.000
ENSELUG00000024279	sar1ab	64	34.091	ENSELUG00000015699	arl4ca	69	34.091
ENSELUG00000024279	sar1ab	73	30.556	ENSELUG00000022533	arf1	62	30.556
ENSELUG00000024279	sar1ab	67	35.036	ENSELUG00000004400	arl4cb	69	35.036
ENSELUG00000024279	sar1ab	73	32.414	ENSELUG00000009390	arl8ba	73	32.414
ENSELUG00000024279	sar1ab	93	34.043	ENSELUG00000013130	-	97	34.043
ENSELUG00000024279	sar1ab	61	37.398	ENSELUG00000000436	-	75	37.398
ENSELUG00000024279	sar1ab	95	32.979	ENSELUG00000016208	arl3l2	89	32.979
ENSELUG00000024279	sar1ab	96	35.079	ENSELUG00000003904	arl3l1	95	35.079
ENSELUG00000024279	sar1ab	66	34.351	ENSELUG00000014428	arf4	73	34.351
ENSELUG00000024279	sar1ab	72	32.867	ENSELUG00000008395	ARF3	78	32.867
ENSELUG00000024279	sar1ab	61	36.000	ENSELUG00000011113	-	55	36.000
ENSELUG00000024279	sar1ab	70	34.532	ENSELUG00000016704	arl2	76	34.532
ENSELUG00000024279	sar1ab	73	31.724	ENSELUG00000003770	arl8a	72	31.724
ENSELUG00000024279	sar1ab	73	31.724	ENSELUG00000003984	arl8bb	56	31.724
ENSELUG00000024279	sar1ab	63	35.659	ENSELUG00000000269	ARL6	66	35.659
ENSELUG00000024279	sar1ab	64	33.594	ENSELUG00000010736	arl8a	68	33.594
ENSELUG00000024279	sar1ab	100	85.859	ENSELUG00000020912	sar1b	100	85.859

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000024279	sar1ab	100	89.899	ENSACIG00000019827	sar1ab	100	89.899	Amphilophus_citrinellus
ENSELUG00000024279	sar1ab	100	92.424	ENSAOCG00000022062	sar1ab	100	92.424	Amphiprion_ocellaris
ENSELUG00000024279	sar1ab	100	92.424	ENSAPEG00000011525	sar1ab	100	92.424	Amphiprion_percula
ENSELUG00000024279	sar1ab	100	94.444	ENSATEG00000003466	sar1ab	100	94.444	Anabas_testudineus
ENSELUG00000024279	sar1ab	100	86.869	ENSACLG00000013053	sar1ab	100	86.869	Astatotilapia_calliptera
ENSELUG00000024279	sar1ab	100	92.424	ENSCSEG00000004825	sar1ab	100	92.424	Cynoglossus_semilaevis
ENSELUG00000024279	sar1ab	100	81.313	ENSCVAG00000006500	-	100	81.313	Cyprinodon_variegatus
ENSELUG00000024279	sar1ab	100	88.384	ENSCVAG00000015162	sar1ab	100	88.384	Cyprinodon_variegatus
ENSELUG00000024279	sar1ab	100	93.434	ENSDARG00000033320	sar1ab	100	93.434	Danio_rerio
ENSELUG00000024279	sar1ab	100	87.374	ENSFHEG00000021773	sar1ab	100	87.374	Fundulus_heteroclitus
ENSELUG00000024279	sar1ab	100	81.818	ENSFHEG00000012352	-	100	81.818	Fundulus_heteroclitus
ENSELUG00000024279	sar1ab	100	90.404	ENSGMOG00000012588	sar1ab	100	90.404	Gadus_morhua
ENSELUG00000024279	sar1ab	100	81.818	ENSGAFG00000004846	-	100	81.818	Gambusia_affinis
ENSELUG00000024279	sar1ab	100	89.899	ENSGAFG00000009702	sar1ab	100	89.899	Gambusia_affinis
ENSELUG00000024279	sar1ab	100	92.424	ENSGACG00000008616	sar1ab	100	92.424	Gasterosteus_aculeatus
ENSELUG00000024279	sar1ab	100	86.869	ENSHBUG00000021221	sar1ab	100	86.869	Haplochromis_burtoni
ENSELUG00000024279	sar1ab	100	93.434	ENSHCOG00000002845	sar1ab	80	93.434	Hippocampus_comes
ENSELUG00000024279	sar1ab	100	90.404	ENSKMAG00000018006	sar1ab	100	90.404	Kryptolebias_marmoratus
ENSELUG00000024279	sar1ab	100	93.939	ENSLBEG00000001114	sar1ab	100	93.939	Labrus_bergylta
ENSELUG00000024279	sar1ab	100	93.434	ENSMAMG00000021314	sar1ab	100	93.434	Mastacembelus_armatus
ENSELUG00000024279	sar1ab	100	86.869	ENSMZEG00005027606	sar1ab	100	86.869	Maylandia_zebra
ENSELUG00000024279	sar1ab	100	93.939	ENSMMOG00000010360	sar1ab	100	93.939	Mola_mola
ENSELUG00000024279	sar1ab	100	91.919	ENSMALG00000005831	sar1ab	100	91.919	Monopterus_albus
ENSELUG00000024279	sar1ab	100	87.374	ENSNBRG00000018772	sar1ab	100	87.374	Neolamprologus_brichardi
ENSELUG00000024279	sar1ab	100	88.384	ENSONIG00000018509	sar1ab	100	88.384	Oreochromis_niloticus
ENSELUG00000024279	sar1ab	100	82.828	ENSORLG00000009132	-	90	82.828	Oryzias_latipes
ENSELUG00000024279	sar1ab	100	90.909	ENSORLG00000006779	sar1ab	67	90.909	Oryzias_latipes
ENSELUG00000024279	sar1ab	100	82.828	ENSORLG00020007024	-	90	82.828	Oryzias_latipes_hni
ENSELUG00000024279	sar1ab	100	90.404	ENSORLG00020005458	sar1ab	100	90.404	Oryzias_latipes_hni
ENSELUG00000024279	sar1ab	100	82.323	ENSORLG00015006223	-	94	88.393	Oryzias_latipes_hsok
ENSELUG00000024279	sar1ab	100	90.909	ENSORLG00015010542	sar1ab	100	90.909	Oryzias_latipes_hsok
ENSELUG00000024279	sar1ab	100	91.919	ENSOMEG00000004948	sar1ab	100	91.919	Oryzias_melastigma
ENSELUG00000024279	sar1ab	100	82.323	ENSOMEG00000012020	-	100	82.323	Oryzias_melastigma
ENSELUG00000024279	sar1ab	100	85.859	ENSPKIG00000007615	sar1ab	100	85.859	Paramormyrops_kingsleyae
ENSELUG00000024279	sar1ab	100	93.939	ENSPMGG00000013330	sar1ab	100	93.939	Periophthalmus_magnuspinnatus
ENSELUG00000024279	sar1ab	100	90.909	ENSPFOG00000023432	sar1ab	100	90.909	Poecilia_formosa
ENSELUG00000024279	sar1ab	100	90.909	ENSPLAG00000023705	sar1ab	100	90.909	Poecilia_latipinna
ENSELUG00000024279	sar1ab	100	81.313	ENSPMEG00000001717	-	100	81.313	Poecilia_mexicana
ENSELUG00000024279	sar1ab	100	90.909	ENSPMEG00000000559	sar1ab	100	90.909	Poecilia_mexicana
ENSELUG00000024279	sar1ab	100	90.909	ENSPREG00000016098	sar1ab	100	90.909	Poecilia_reticulata
ENSELUG00000024279	sar1ab	100	87.374	ENSPNYG00000011603	sar1ab	100	87.374	Pundamilia_nyererei
ENSELUG00000024279	sar1ab	100	92.929	ENSPNAG00000008007	sar1ab	100	92.929	Pygocentrus_nattereri
ENSELUG00000024279	sar1ab	100	88.889	ENSSFOG00015014010	sar1a	100	88.889	Scleropages_formosus
ENSELUG00000024279	sar1ab	72	79.021	ENSSMAG00000020758	sar1ab	95	79.021	Scophthalmus_maximus
ENSELUG00000024279	sar1ab	100	94.949	ENSSDUG00000010773	sar1ab	100	94.949	Seriola_dumerili
ENSELUG00000024279	sar1ab	100	94.949	ENSSLDG00000025558	sar1ab	100	94.949	Seriola_lalandi_dorsalis
ENSELUG00000024279	sar1ab	100	92.929	ENSSPAG00000009194	sar1ab	100	92.929	Stegastes_partitus
ENSELUG00000024279	sar1ab	100	91.414	ENSTRUG00000007269	sar1ab	100	91.414	Takifugu_rubripes
ENSELUG00000024279	sar1ab	100	91.414	ENSTNIG00000008635	sar1ab	100	91.414	Tetraodon_nigroviridis
ENSELUG00000024279	sar1ab	100	90.404	ENSXMAG00000003130	sar1ab	100	90.404	Xiphophorus_maculatus
ENSELUG00000024279	sar1ab	100	82.323	ENSXMAG00000026223	SAR1A	100	82.323	Xiphophorus_maculatus